; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023317 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023317
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSerine/arginine-rich splicing factor SR45a-like
Genome locationchr7:47123481..47125916
RNA-Seq ExpressionLag0023317
SyntenyLag0023317
Gene Ontology termsGO:0048026 - positive regulation of mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031790.1 serine/arginine-rich splicing factor SR45a-like [Cucumis melo var. makuwa]1.4e-9975.43Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPS+KRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADP TRESRGFGF+TMSSNDEAE CI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT
        KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG       AT L VLPATL IG A A  LIIHL VAG DP+  T I DHMVP   +DHT L 
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT

Query:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE
          EDM L TIG  D IL   + I+GH+L        G  TG THLM  IPLILTTEGTG GQFLG FHQ QG  A   P V L  LGEE
Subjt:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE

KAG7036969.1 Serine/arginine-rich splicing factor SR45a [Cucurbita argyrosperma subsp. argyrosperma]1.6e-10361.54Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPSYKRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLS RITRRELEKHFSAEGTVLDVHLV DPWTRESRGFGF+TMSSNDEAERCI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEK----------------ARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIGAQATHLIIHLNVAGADPILLTSIE
        KYLNRSVLEGR+ITVEK                ARRRRGRTPTPGRY GLRTV                                    GADPIL    E
Subjt:  KYLNRSVLEGRIITVEK----------------ARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIGAQATHLIIHLNVAGADPILLTSIE

Query:  DHMVPH-PAIDHTPLTVDEDMTLPTIGIIDHILDLALLIVGHLLGDV-------------------TGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGL
        D M  H  AIDHTPL   EDM L TIG+I  ILD  L +VG L GDV                   TGRTHL TI PLI TTEGTGIGQFLGV HQRQG 
Subjt:  DHMVPH-PAIDHTPLTVDEDMTLPTIGIIDHILDLALLIVGHLLGDV-------------------TGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGL

Query:  LADAIPAVILQCLGEEPRGGVTLAAPPGNQGEAIHVVLPLNEAGDQGAILAVFLLNQEAGGVALAAIPRDDMTTSFMKAHVREGILVGVD
        L D IPAVIL    E PRG   +A       E IH V PLNEAGD GAI  V LLN+ A GVALAAI +  +          E ILVGV+
Subjt:  LADAIPAVILQCLGEEPRGGVTLAAPPGNQGEAIHVVLPLNEAGDQGAILAVFLLNQEAGGVALAAIPRDDMTTSFMKAHVREGILVGVD

TYJ97341.1 serine/arginine-rich splicing factor SR45a-like [Cucumis melo var. makuwa]2.1e-9874.74Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPS+KRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHL+ADP TRESRGFGF+TMSSNDEAE CI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT
        KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG       AT L VLPATL IG A A  LIIHL VAG DP+  T I DHMVP   +DHT L 
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT

Query:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE
          EDM L TIG  D IL   + I+GH+L        G  TG THLM  IPLILTTEGTG GQFLG FHQ QG  A   P V L   GEE
Subjt:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE

XP_004145262.1 serine/arginine-rich splicing factor SR45a [Cucumis sativus]3.9e-6596.4Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPS+KRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADP TRESRGFGF+TMSSNDEAE CI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG
        KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG

XP_022150940.1 serine/arginine-rich splicing factor SR45a-like isoform X1 [Momordica charantia]1.1e-6494.93Show/hide
Query:  MMSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERC
        MMSYSR+SRYSRSPSY+RS+SRSLSRSRS SRSPSSDVENPGNNLYVTGLSPR+TRRELEKHFSAEGTVLDVHLVADPWTRESRGFGF+TMSSN+EAERC
Subjt:  MMSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERC

Query:  IKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTV
        IKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTV
Subjt:  IKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTV

TrEMBL top hitse value%identityAlignment
A0A0A0LXJ6 RRM domain-containing protein1.9e-6596.4Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPS+KRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADP TRESRGFGF+TMSSNDEAE CI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG
        KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG

A0A5A7SM07 Serine/arginine-rich splicing factor SR45a-like6.9e-10075.43Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPS+KRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADP TRESRGFGF+TMSSNDEAE CI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT
        KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG       AT L VLPATL IG A A  LIIHL VAG DP+  T I DHMVP   +DHT L 
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT

Query:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE
          EDM L TIG  D IL   + I+GH+L        G  TG THLM  IPLILTTEGTG GQFLG FHQ QG  A   P V L  LGEE
Subjt:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE

A0A5D3BFE7 Serine/arginine-rich splicing factor SR45a-like1.0e-9874.74Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        MSYSRRSRYSRSPS+KRSVSRSLSRSRS SRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHL+ADP TRESRGFGF+TMSSNDEAE CI
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT
        KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG       AT L VLPATL IG A A  LIIHL VAG DP+  T I DHMVP   +DHT L 
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIG-AQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLT

Query:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE
          EDM L TIG  D IL   + I+GH+L        G  TG THLM  IPLILTTEGTG GQFLG FHQ QG  A   P V L   GEE
Subjt:  VDEDMTLPTIGIIDHILDLALLIVGHLL--------GDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEE

A0A6J1D9V3 serine/arginine-rich splicing factor SR45a-like isoform X15.5e-6594.93Show/hide
Query:  MMSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERC
        MMSYSR+SRYSRSPSY+RS+SRSLSRSRS SRSPSSDVENPGNNLYVTGLSPR+TRRELEKHFSAEGTVLDVHLVADPWTRESRGFGF+TMSSN+EAERC
Subjt:  MMSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERC

Query:  IKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTV
        IKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTV
Subjt:  IKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTV

A0A6N2MJS3 RRM domain-containing protein6.5e-6654.89Show/hide
Query:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSS--DVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAER
        MSYSRRSRYS SPS  R  SRS+SRSRS SRS SS  DVENPGNNLYVTGLSPRIT++ELEKHF+AEGTV+DVHLV DP TRESRGFGFVTMS+  EA+R
Subjt:  MSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSS--DVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAER

Query:  CIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLI-GAQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTP
        CIKYL+RSVLEGR+ITVEKA+RRRGRTPTPGRYLGLRT+ G GG       L  L ATLLI GA A   +IHLNVAGADP  LT+ +          H  
Subjt:  CIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLI-GAQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTP

Query:  LTVDEDMTLPTIGIIDHILDLALLIVGHLLGDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEEPRGGVTLAAPPGNQGEA
        LT+        I +     +L    VG L   VTG  HL T                 G+ HQ    + D I  +       E +GG    A P +QG A
Subjt:  LTVDEDMTLPTIGIIDHILDLALLIVGHLLGDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEEPRGGVTLAAPPGNQGEA

Query:  IHVVLPLNEAGDQGAIL
        I  V PL+  G QG ++
Subjt:  IHVVLPLNEAGDQGAIL

SwissProt top hitse value%identityAlignment
P62995 Transformer-2 protein homolog beta8.9e-1240Show/hide
Query:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNN-----LYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEA
        S SR  R SRS SY R   R  S S S   +    V N  N      L V GLS   T R+L + FS  G + DV +V D  +R SRGF FV   + D+A
Subjt:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNN-----LYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEA

Query:  ERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT
        +   +  N   L+GR I V+ +  +R  TPTPG Y+G  T
Subjt:  ERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT

P62996 Transformer-2 protein homolog beta8.9e-1240Show/hide
Query:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNN-----LYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEA
        S SR  R SRS SY R   R  S S S   +    V N  N      L V GLS   T R+L + FS  G + DV +V D  +R SRGF FV   + D+A
Subjt:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNN-----LYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEA

Query:  ERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT
        +   +  N   L+GR I V+ +  +R  TPTPG Y+G  T
Subjt:  ERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT

Q10422 Uncharacterized RNA-binding protein C25G10.011.1e-1744.79Show/hide
Query:  ENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLG
        EN GN+L+V+G++ R+   EL++ FS  GTV  V ++ +P T+ SRGFGF++ S+ +EA   I  LN     GR++ V+KA+R R  +PTPG+Y+G
Subjt:  ENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLG

Q3ZBT6 Transformer-2 protein homolog beta8.9e-1240Show/hide
Query:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNN-----LYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEA
        S SR  R SRS SY R   R  S S S   +    V N  N      L V GLS   T R+L + FS  G + DV +V D  +R SRGF FV   + D+A
Subjt:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNN-----LYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEA

Query:  ERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT
        +   +  N   L+GR I V+ +  +R  TPTPG Y+G  T
Subjt:  ERCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT

Q84TH4 Serine/arginine-rich splicing factor SR45a5.6e-4670.42Show/hide
Query:  MSYSRRSRYSRSPS-YKRSVSRSLSR--SRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAE
        MSYSRRSRYS S S Y +   RS+SR  SRS +RS SSD ENPGN+LYVTGLS R+T R+LE HF+ EG V DVHLV DPWTRESRGFGF++M S  +A 
Subjt:  MSYSRRSRYSRSPS-YKRSVSRSLSR--SRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAE

Query:  RCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG
        RCI+ L+ SVL+GR+ITVEKARRRRGRTPTPG+YLGLRT  G
Subjt:  RCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG

Arabidopsis top hitse value%identityAlignment
AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-4770.42Show/hide
Query:  MSYSRRSRYSRSPS-YKRSVSRSLSR--SRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAE
        MSYSRRSRYS S S Y +   RS+SR  SRS +RS SSD ENPGN+LYVTGLS R+T R+LE HF+ EG V DVHLV DPWTRESRGFGF++M S  +A 
Subjt:  MSYSRRSRYSRSPS-YKRSVSRSLSR--SRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAE

Query:  RCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG
        RCI+ L+ SVL+GR+ITVEKARRRRGRTPTPG+YLGLRT  G
Subjt:  RCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHG

AT1G07350.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-3567.5Show/hide
Query:  MSYSRRSRYSRSPS-YKRSVSRSLSR--SRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAE
        MSYSRRSRYS S S Y +   RS+SR  SRS +RS SSD ENPGN+LYVTGLS R+T R+LE HF+ EG V DVHLV DPWTRESRGFGF++M S  +A 
Subjt:  MSYSRRSRYSRSPS-YKRSVSRSLSR--SRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAE

Query:  RCIKYLNRSVLEGRIITVEK
        RCI+ L+ SVL+GR+ITVEK
Subjt:  RCIKYLNRSVLEGRIITVEK

AT4G35785.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-3764.44Show/hide
Query:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCIK
        S SR    SRS S  R VS S SR RS SRS  S+VENPG  LYVTGLS R+T ++LE HF+ EG V    LV +P TR SRGF FVTMSS  +AERCIK
Subjt:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCIK

Query:  YLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT
        YLN+SVLEGR ITVE++RR+R RTPTPG YLGL++
Subjt:  YLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT

AT4G35785.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-3663.97Show/hide
Query:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPS-SDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        S SR    SRS S  R VS S SR RS SRS   S+VENPG  LYVTGLS R+T ++LE HF+ EG V    LV +P TR SRGF FVTMSS  +AERCI
Subjt:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPS-SDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT
        KYLN+SVLEGR ITVE++RR+R RTPTPG YLGL++
Subjt:  KYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRT

AT4G35785.3 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-2863.25Show/hide
Query:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPS-SDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI
        S SR    SRS S  R VS S SR RS SRS   S+VENPG  LYVTGLS R+T ++LE HF+ EG V    LV +P TR SRGF FVTMSS  +AERCI
Subjt:  SYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPS-SDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCI

Query:  KYLNRSVLEGRIITVEK
        KYLN+SVLEGR ITVE+
Subjt:  KYLNRSVLEGRIITVEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGTACTCCAGAAGGTCTAGGTACTCTCGGTCTCCTTCATACAAACGTTCAGTCTCAAGGTCCCTGTCAAGGTCAAGGAGCTGTTCAAGGAGCCCTTCAAGTGA
CGTCGAAAATCCTGGTAACAATTTGTACGTCACTGGTTTGTCACCTAGAATAACGAGAAGAGAACTCGAGAAGCATTTTTCTGCTGAGGGAACAGTGCTAGATGTTCATC
TTGTGGCTGATCCATGGACTAGAGAATCTCGTGGATTTGGATTTGTTACCATGTCTAGTAATGATGAGGCTGAACGTTGCATCAAATATCTGAATCGATCTGTACTTGAA
GGTCGAATAATTACCGTGGAGAAGGCTCGAAGACGGAGAGGTAGAACTCCTACTCCAGGGAGATATCTTGGACTTAGAACAGTTCATGGTGAGGGAGGCGTAGATCACAC
AGCTACTCTTCTCGGCGTTCTCCCAGCTACTCTCCTTATAGGAGCTCAAGCCACTCATCTCATTATTCATCTGAACGTAGCAGGAGCAGATCCCATTCTTCTAACCAGCA
TCGAAGATCATATGGTTCCCCATCCTGCTATAGATCATACTCCCCTTACAGTCGACGAAGATATGACTCTCCCTACTATAGGCATCATAGATCATATTCTCGATCTCGCT
CTCCTTATAGTAGGTCACCTGCTAGGAGACGTGACAGGTCGTACTCACCTTATGACTATTATTCCCCTGATCCTTACTACAGAAGGCACAGGTATCGGTCAGTTTCTAGG
AGTGTTTCACCAAAGGCAAGGACTTCTAGCAGACGCTATTCCCGCAGTTATTCTCCAATGCCTAGGAGAAGAACCTCGAGGAGGAGTTACTCTCGCAGCCCCTCCTGGGA
ATCAAGGAGAAGCTATTCACGTAGTACTTCCCCTGAACGAAGCAGGAGATCAGGGAGCTATTCTTGCAGTGTTTCTCCTGAACCAAGAAGCTGGAGGAGTCGCTCTCGCA
GCCATACCCCGAGACGACATGACTACAAGCTTTATGAAAGCCCACGTAAGAGAGGGTATTCTGGTGGGAGTCGATCAAGAAGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGTCGTACTCCAGAAGGTCTAGGTACTCTCGGTCTCCTTCATACAAACGTTCAGTCTCAAGGTCCCTGTCAAGGTCAAGGAGCTGTTCAAGGAGCCCTTCAAGTGA
CGTCGAAAATCCTGGTAACAATTTGTACGTCACTGGTTTGTCACCTAGAATAACGAGAAGAGAACTCGAGAAGCATTTTTCTGCTGAGGGAACAGTGCTAGATGTTCATC
TTGTGGCTGATCCATGGACTAGAGAATCTCGTGGATTTGGATTTGTTACCATGTCTAGTAATGATGAGGCTGAACGTTGCATCAAATATCTGAATCGATCTGTACTTGAA
GGTCGAATAATTACCGTGGAGAAGGCTCGAAGACGGAGAGGTAGAACTCCTACTCCAGGGAGATATCTTGGACTTAGAACAGTTCATGGTGAGGGAGGCGTAGATCACAC
AGCTACTCTTCTCGGCGTTCTCCCAGCTACTCTCCTTATAGGAGCTCAAGCCACTCATCTCATTATTCATCTGAACGTAGCAGGAGCAGATCCCATTCTTCTAACCAGCA
TCGAAGATCATATGGTTCCCCATCCTGCTATAGATCATACTCCCCTTACAGTCGACGAAGATATGACTCTCCCTACTATAGGCATCATAGATCATATTCTCGATCTCGCT
CTCCTTATAGTAGGTCACCTGCTAGGAGACGTGACAGGTCGTACTCACCTTATGACTATTATTCCCCTGATCCTTACTACAGAAGGCACAGGTATCGGTCAGTTTCTAGG
AGTGTTTCACCAAAGGCAAGGACTTCTAGCAGACGCTATTCCCGCAGTTATTCTCCAATGCCTAGGAGAAGAACCTCGAGGAGGAGTTACTCTCGCAGCCCCTCCTGGGA
ATCAAGGAGAAGCTATTCACGTAGTACTTCCCCTGAACGAAGCAGGAGATCAGGGAGCTATTCTTGCAGTGTTTCTCCTGAACCAAGAAGCTGGAGGAGTCGCTCTCGCA
GCCATACCCCGAGACGACATGACTACAAGCTTTATGAAAGCCCACGTAAGAGAGGGTATTCTGGTGGGAGTCGATCAAGAAGTCTAA
Protein sequenceShow/hide protein sequence
MMSYSRRSRYSRSPSYKRSVSRSLSRSRSCSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLVADPWTRESRGFGFVTMSSNDEAERCIKYLNRSVLE
GRIITVEKARRRRGRTPTPGRYLGLRTVHGEGGVDHTATLLGVLPATLLIGAQATHLIIHLNVAGADPILLTSIEDHMVPHPAIDHTPLTVDEDMTLPTIGIIDHILDLA
LLIVGHLLGDVTGRTHLMTIIPLILTTEGTGIGQFLGVFHQRQGLLADAIPAVILQCLGEEPRGGVTLAAPPGNQGEAIHVVLPLNEAGDQGAILAVFLLNQEAGGVALA
AIPRDDMTTSFMKAHVREGILVGVDQEV