; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0023377 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023377
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSAGA-associated factor 11
Genome locationchr7:47741720..47743322
RNA-Seq ExpressionLag0023377
SyntenyLag0023377
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0035616 - histone H2B conserved C-terminal lysine deubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031969 - chloroplast membrane (cellular component)
GO:0070461 - SAGA-type complex (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013246 - SAGA complex, Sgf11 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060025.1 farnesol kinase [Cucumis melo var. makuwa]2.1e-8395.93Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN

XP_004153719.1 SAGA-associated factor 11 [Cucumis sativus]9.0e-8795.51Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_008457340.1 PREDICTED: ataxin-7-like protein 3 [Cucumis melo]6.9e-8796.07Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_022150963.1 ataxin-7-like protein 3 [Momordica charantia]1.1e-8190.45Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNE+++SS TQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKY+VDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQ RYSRGSPV AYSPY +S   NRLPNG S +AGEEYSNGTSEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

XP_038893583.1 SAGA-associated factor 11 [Benincasa hispida]5.5e-8493.82Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPY NSTSTNRL NGTSSLAGEEYSNG SEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

TrEMBL top hitse value%identityAlignment
A0A0A0LYA8 SAGA-associated factor 114.4e-8795.51Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVD+ASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

A0A1S3C599 SAGA-associated factor 113.3e-8796.07Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

A0A5D3BBT0 SAGA-associated factor 111.0e-8395.93Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNEDN+SS TQLSSN FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
        RSIMAGRFAPHLEKCMGRGRKAR KVTRSSTAAQSRYSRG+PVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSN

A0A6J1DBL8 SAGA-associated factor 115.5e-8290.45Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMPNE+++SS TQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKY+VDIFGQ HP VANEIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQ RYSRGSPV AYSPY +S   NRLPNG S +AGEEYSNGTSEDP
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

A0A6J1GAV8 SAGA-associated factor 115.5e-8292.7Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MSMP+EDN+SS  QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHP VA+EIFDCMNCG
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP
        RSI+AGRFAPHLEKCMGRGRKARLKVTRSSTA QSRYSRGS VSAYSPYPNSTSTNRLPNGTSSLAG EYSNG S +P
Subjt:  RSIMAGRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP

SwissProt top hitse value%identityAlignment
A1L209 Ataxin-7-like protein 31.1e-0732.37Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MS+   DN+     L+ + + DL++   + +  E HR  + G    L+E ++E             S    E   +  VDIFGQ +    N+   C NC 
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRK----ARLKVTRSSTAAQS
        RSI A RFAPHLEKC+G GR     A  ++  S+  ++S
Subjt:  RSIMAGRFAPHLEKCMGRGRK----ARLKVTRSSTAAQS

B1PM81 SAGA-associated factor 11 homolog1.6e-0630.77Show/hide
Query:  QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCM--NCGRSIMAGRFAPH
        + ++  +  LLD  +V V  E H + + G   NL   +      ++   R+ D  N          DIFG +    A +  DC   NC R + A RFAPH
Subjt:  QLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCM--NCGRSIMAGRFAPH

Query:  LEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTS
        LEKCMG GR +    +R     +S  +  S  S+Y    N+ S
Subjt:  LEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTS

B4KY72 SAGA-associated factor 11 homolog3.6e-0631.78Show/hide
Query:  FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCM--NCGRSIMAGRFAPHLEKCMG
        F  LLD V+  +  E H + + G    L+   EE   +A++  R+ +  N         +DIFG +    A +  DC   +C R + A RFAPHLEKCMG
Subjt:  FGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCM--NCGRSIMAGRFAPHLEKCMG

Query:  RGRKARLKVTRSSTAAQSRYSRGSPVSAY
         GR +    +R     +   +  S  S Y
Subjt:  RGRKARLKVTRSSTAAQSRYSRGSPVSAY

Q14CW9 Ataxin-7-like protein 34.8e-0631.97Show/hide
Query:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG
        MS+   DNS     ++   + DL++   +    E HR  + G    L++ +              DS    E   +  +DIFGQ      ++   C NC 
Subjt:  MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCG

Query:  RSIMAGRFAPHLEKCMGRGRKA
        RSI A RFAPHLEKC+G GR +
Subjt:  RSIMAGRFAPHLEKCMGRGRKA

Q94BV2 SAGA-associated factor 112.2e-5969.23Show/hide
Query:  EDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCGRSIMA
        EDN SS  QLSS  F DL+DSVI DVASECHR+ARLGLDR+L+  EEELRLS +AR ++AD SN+ E N KYVVDIFGQ HPPVA+E+F+CMNCGR I+A
Subjt:  EDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCGRSIMA

Query:  GRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT
        GRFAPHLEKCMG+GRKAR K TRS+TAAQ+R +R SP   YSPYPNS S N+L +G+  +AGE+ SN T
Subjt:  GRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT

Arabidopsis top hitse value%identityAlignment
AT5G58575.1 CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.5e-6069.23Show/hide
Query:  EDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCGRSIMA
        EDN SS  QLSS  F DL+DSVI DVASECHR+ARLGLDR+L+  EEELRLS +AR ++AD SN+ E N KYVVDIFGQ HPPVA+E+F+CMNCGR I+A
Subjt:  EDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCGRSIMA

Query:  GRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT
        GRFAPHLEKCMG+GRKAR K TRS+TAAQ+R +R SP   YSPYPNS S N+L +G+  +AGE+ SN T
Subjt:  GRFAPHLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCCTAATGAGGACAATTCATCTTCTCCTACTCAGCTTTCATCTAATTTCTTTGGGGATCTCCTGGATTCCGTTATTGTTGATGTTGCATCGGAATGTCATCG
AATAGCAAGATTAGGCCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAGGCACGAGTAAGAGTAGCTGACTCTAGCAATAGTAGTGAAGCAA
ACGGAAAATATGTAGTTGATATTTTTGGACAAAATCATCCCCCGGTTGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCAATCATGGCTGGAAGATTTGCTCCT
CATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGCCTCAAAGTAACAAGAAGCAGTACAGCTGCACAGAGCCGGTATTCACGAGGCAGTCCTGTTTCTGCATATTC
CCCTTATCCTAATTCCACCAGCACAAATCGCTTGCCTAATGGAACGTCTAGCCTTGCAGGGGAGGAGTACTCAAACGGTACATCCGAAGACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATGCCTAATGAGGACAATTCATCTTCTCCTACTCAGCTTTCATCTAATTTCTTTGGGGATCTCCTGGATTCCGTTATTGTTGATGTTGCATCGGAATGTCATCG
AATAGCAAGATTAGGCCTTGATCGTAACTTAGAAGAGGAAGAAGAAGAATTAAGACTTTCAGCACAGGCACGAGTAAGAGTAGCTGACTCTAGCAATAGTAGTGAAGCAA
ACGGAAAATATGTAGTTGATATTTTTGGACAAAATCATCCCCCGGTTGCAAATGAAATATTTGATTGCATGAATTGTGGTCGATCAATCATGGCTGGAAGATTTGCTCCT
CATTTAGAGAAATGCATGGGAAGGGGTAGAAAGGCTCGCCTCAAAGTAACAAGAAGCAGTACAGCTGCACAGAGCCGGTATTCACGAGGCAGTCCTGTTTCTGCATATTC
CCCTTATCCTAATTCCACCAGCACAAATCGCTTGCCTAATGGAACGTCTAGCCTTGCAGGGGAGGAGTACTCAAACGGTACATCCGAAGACCCATGA
Protein sequenceShow/hide protein sequence
MSMPNEDNSSSPTQLSSNFFGDLLDSVIVDVASECHRIARLGLDRNLEEEEEELRLSAQARVRVADSSNSSEANGKYVVDIFGQNHPPVANEIFDCMNCGRSIMAGRFAP
HLEKCMGRGRKARLKVTRSSTAAQSRYSRGSPVSAYSPYPNSTSTNRLPNGTSSLAGEEYSNGTSEDP