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Lag0023438 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0023438
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationchr7:48220508..48220831
RNA-Seq ExpressionLag0023438
SyntenyLag0023438
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]2.5e-2368.54Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MS+ HKSD +K ++T K LE  DRS +E   EAL+ A D  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRKISDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]1.5e-2064.04Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MS+FHKSD QK ++  +  E  DRS +E   EAL+ A    GESCRTPTS +HRIP  +SCPTTPRK++VV KRK SDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]9.4e-2373.03Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MS+FHKSD QK  +  KP EE DRS +EDG      A D GGESCRTPTSLRHRIPT RS PTTPRKRKV SKRK SDQSFFE TGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2673.03Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MSEF  SD QKS++ QKP EE DRS +EDG EAL    DGGGESCRTP+SL+HRIP  RSCPTTPRK+KVVSKRK SDQSFFE+T R E
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-2270.79Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MS+FHKSD QK  +  KP EE DRS +EDG      A D  GESCRTPTSLRHRIPT RS PTTPRKRK+ SKRK SDQSFFE TGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

TrEMBL top hitse value%identityAlignment
A0A067F2H9 Uncharacterized protein (Fragment)3.5e-0750Show/hide
Query:  RSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKISDQSFFEATGRGE
        ++++E G E    + D   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK+ +  FFEATGR E
Subjt:  RSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVS--KRKISDQSFFEATGRGE

A0A0A0LV74 Uncharacterized protein7.3e-2164.04Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MS+FHKSD QK ++  +  E  DRS +E   EAL+ A    GESCRTPTS +HRIP  +SCPTTPRK++VV KRK SDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

A0A251NNT8 Uncharacterized protein2.7e-0755.38Show/hide
Query:  GESCRTPTSLRHRIPTVRSCPTTPRKR--KVVSKRKISDQSFFEATGRG--EKIFLSLIESISDR
        G+ CRTPTS  H+IPT++SCPTTPRK+    V KRK++   FFE TGR   E  F S  ES S R
Subjt:  GESCRTPTSLRHRIPTVRSCPTTPRKR--KVVSKRKISDQSFFEATGRG--EKIFLSLIESISDR

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR21.2e-2368.54Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE
        MS+ HKSD +K ++T K LE  DRS +E   EAL+ A D  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRKISDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGE

M5W3L3 Uncharacterized protein (Fragment)2.7e-0755.38Show/hide
Query:  GESCRTPTSLRHRIPTVRSCPTTPRKR--KVVSKRKISDQSFFEATGRG--EKIFLSLIESISDR
        G+ CRTPTS  H+IPT++SCPTTPRK+    V KRK++   FFE TGR   E  F S  ES S R
Subjt:  GESCRTPTSLRHRIPTVRSCPTTPRKR--KVVSKRKISDQSFFEATGRG--EKIFLSLIESISDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein3.6e-0435.96Show/hide
Query:  SDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKR----KVVSKRKIS-DQSFFEATGRGEK
        S L ++++ +K +E+  RS +E+  +      +   ES  TPTS  H+IP V +CP  PRKR     +  K ++S D  FFEAT  G +
Subjt:  SDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKR----KVVSKRKIS-DQSFFEATGRGEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAATTTCACAAATCCGATCTCCAAAAGTCAGTACAAACTCAAAAGCCACTGGAAGAAGCTGATCGGAGCGACGACGAAGACGGTCGAGAAGCCCTTCAGGTGGC
ACCCGATGGTGGCGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCGACCGTGCGAAGCTGCCCGACGACGCCAAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAAATTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACACTTTCTATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAATTTCACAAATCCGATCTCCAAAAGTCAGTACAAACTCAAAAGCCACTGGAAGAAGCTGATCGGAGCGACGACGAAGACGGTCGAGAAGCCCTTCAGGTGGC
ACCCGATGGTGGCGGAGAGAGCTGCCGAACTCCGACATCTCTCCGACATCGAATTCCGACCGTGCGAAGCTGCCCGACGACGCCAAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAAATTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGAAAATTTTTCTATCACTGATAGAATCTATCAGTGATAGAAACACTTTCTATCAATGA
Protein sequenceShow/hide protein sequence
MSEFHKSDLQKSVQTQKPLEEADRSDDEDGREALQVAPDGGGESCRTPTSLRHRIPTVRSCPTTPRKRKVVSKRKISDQSFFEATGRGEKIFLSLIESISDRNTFYQ