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Lag0024122 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024122
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMini zinc finger
Genome locationchr10:608039..608443
RNA-Seq ExpressionLag0024122
SyntenyLag0024122
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036083.1 mini zinc finger protein 1 [Cucumis melo var. makuwa]1.5e-3883.81Show/hide
Query:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRS    GSS+ +S+NN+    SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

XP_004137410.1 mini zinc finger protein 1 [Cucumis sativus]5.8e-3882.86Show/hide
Query:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRS    GSS+ +S+NN+    SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGS+GALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

XP_008442199.1 PREDICTED: mini zinc finger protein 1 [Cucumis melo]1.5e-3883.81Show/hide
Query:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRS    GSS+ +S+NN+    SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

XP_022137501.1 mini zinc finger protein 2 [Momordica charantia]7.6e-3893.41Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVV
        MMKKRQVVVKRS+GSSNRNSS  S+SSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVV
Subjt:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVV

XP_022949221.1 mini zinc finger protein 1 [Cucurbita moschata]5.1e-4290.82Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR+DGSSNRNSS +S+SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

TrEMBL top hitse value%identityAlignment
A0A1S3B557 mini zinc finger protein 17.4e-3983.81Show/hide
Query:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRS    GSS+ +S+NN+    SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

A0A5A7SZK7 Mini zinc finger protein 17.4e-3983.81Show/hide
Query:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRS    GSS+ +S+NN+    SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

A0A5D3BJJ4 Mini zinc finger protein 17.4e-3983.81Show/hide
Query:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        +MMKKRQVVVKRS    GSS+ +S+NN+    SSSS VRSVVRYGECQKNHAANIGGYAVDGCREFLA GEEGSNGALTCAACGCHRNFHRREVE+EVVC
Subjt:  IMMKKRQVVVKRSD---GSSNRNSSNNS----SSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Query:  EYSPP
        EYSPP
Subjt:  EYSPP

A0A6J1GBE8 mini zinc finger protein 12.5e-4290.82Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR+DGSSNRNSS +S+SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

A0A6J1K9G7 mini zinc finger protein 12.5e-4290.82Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MMKKRQV+VKR+DGSSNRNSS +S+SSS VRS+VRYGECQKNHAANIGGYAVDGC EFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEY PPN
Subjt:  MMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

SwissProt top hitse value%identityAlignment
B8BIU8 Mini zinc finger protein 13.7e-1956.63Show/hide
Query:  RSDGSSNRNSSNNSSSSSVV------RSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVE
        + D S+ +  +N S++++          VVRY ECQ+NHAA+IGG+AVDGCREF+A+G EG+  AL CAACGCHR+FHRREVE
Subjt:  RSDGSSNRNSSNNSSSSSVV------RSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVE

Q0J5F8 Mini zinc finger protein 43.3e-2052.75Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC
        M KR V+++R +    + ++   ++       VRYGEC++NHAA +GG+AVDGCREFLA GEEG+ GAL CAACGCHR+FHRR V  +  C
Subjt:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVC

Q2Q493 Mini zinc finger protein 32.3e-2972.16Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MKKRQVV+K+      R SS   +SSS   S VRY ECQKNHAANIGGYAVDGCREF+A+   G + ALTCAACGCHRNFHRREV+TEVVCEYSPPN
Subjt:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

Q9CA51 Mini zinc finger protein 14.5e-3372.28Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSS---NNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        MMKKRQ+V+K+   +SN +SS    +SSSSS   S VRY ECQKNHAANIGGYAVDGCREF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEYSPP
Subjt:  MMKKRQVVVKRSDGSSNRNSS---NNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

Query:  N
        N
Subjt:  N

Q9LJW5 Mini zinc finger protein 22.6e-2864.95Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        M+KRQVV++R+  S    S ++S++SS+    VRYGECQKNHAA +GGYAVDGCREF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+ + P
Subjt:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 312.5e-1855.07Show/hide
Query:  VVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        + + +++Y EC KNHAA +GG A DGC EF+ +GE+GS  ALTC+AC CHRNFHR+EVE E+      P
Subjt:  VVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

AT1G18835.1 mini zinc finger1.6e-3072.16Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN
        MKKRQVV+K+      R SS   +SSS   S VRY ECQKNHAANIGGYAVDGCREF+A+   G + ALTCAACGCHRNFHRREV+TEVVCEYSPPN
Subjt:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPPN

AT1G74660.1 mini zinc finger 13.2e-3472.28Show/hide
Query:  MMKKRQVVVKRSDGSSNRNSS---NNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        MMKKRQ+V+K+   +SN +SS    +SSSSS   S VRY ECQKNHAANIGGYAVDGCREF+A G EG+  AL CAACGCHRNFHR+EV+TEVVCEYSPP
Subjt:  MMKKRQVVVKRSDGSSNRNSS---NNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

Query:  N
        N
Subjt:  N

AT3G28917.1 mini zinc finger 21.8e-2964.95Show/hide
Query:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP
        M+KRQVV++R+  S    S ++S++SS+    VRYGECQKNHAA +GGYAVDGCREF+A+ GEEG+  ALTCAACGCHR+FHRRE+ETEVVC+ + P
Subjt:  MKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLAN-GEEGSNGALTCAACGCHRNFHRREVETEVVCEYSPP

AT4G24660.1 homeobox protein 226.5e-1964.52Show/hide
Query:  SSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVET
        S  V + +RY EC KNHA NIGG+AVDGC EF+ +GE+G+  AL CAACGCHRNFHR+E E+
Subjt:  SSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAACGCHRNFHRREVET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGAAGACTTCAAAAACAAACACAAACCCAAATCCAAAACTCCCACAAAAACCCATTTCATCAGCTGTTCATCTCACAAGGCTAGCTAGGGTTTTCATCATGAT
GAAGAAACGGCAAGTAGTTGTTAAAAGATCAGATGGATCATCAAACAGAAACAGCAGCAACAACAGTTCTTCATCTTCAGTTGTAAGAAGTGTGGTGAGATATGGAGAGT
GCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGCTGCAGAGAGTTCTTGGCAAATGGAGAAGAAGGCTCCAATGGAGCTCTCACTTGTGCTGCTTGT
GGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAGTACTCTCCTCCAAATGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGAAGACTTCAAAAACAAACACAAACCCAAATCCAAAACTCCCACAAAAACCCATTTCATCAGCTGTTCATCTCACAAGGCTAGCTAGGGTTTTCATCATGAT
GAAGAAACGGCAAGTAGTTGTTAAAAGATCAGATGGATCATCAAACAGAAACAGCAGCAACAACAGTTCTTCATCTTCAGTTGTAAGAAGTGTGGTGAGATATGGAGAGT
GCCAAAAGAATCATGCTGCAAATATTGGTGGATATGCTGTTGATGGCTGCAGAGAGTTCTTGGCAAATGGAGAAGAAGGCTCCAATGGAGCTCTCACTTGTGCTGCTTGT
GGCTGCCACAGGAATTTCCATAGAAGAGAAGTTGAAACTGAAGTGGTTTGTGAGTACTCTCCTCCAAATGGTTGA
Protein sequenceShow/hide protein sequence
MRVKTSKTNTNPNPKLPQKPISSAVHLTRLARVFIMMKKRQVVVKRSDGSSNRNSSNNSSSSSVVRSVVRYGECQKNHAANIGGYAVDGCREFLANGEEGSNGALTCAAC
GCHRNFHRREVETEVVCEYSPPNG