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Lag0024135 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024135
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr10:715380..716062
RNA-Seq ExpressionLag0024135
SyntenyLag0024135
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0043229 - intracellular organelle (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW39368.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.2e-3539.78Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+     GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.2e-3439.78Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW      GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

RVW96808.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.8e-3540.32Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+   S GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

RVX09324.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.2e-3539.78Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+     GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]2.5e-3743.09Show/hide
Query:  SRRLERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYK
        ++R+ R TS+H+PI L  G+N WG +PFRF N+WLSH++F   ++ WW + P  GW GHG + KLK LK  +K W  + F     Q++ L   ++ +D  
Subjt:  SRRLERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYK

Query:  EERGEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISF
        E    ++      R   +  L S+   EE  WRQRCK KW  EGD NT FFHR +A  RR+  I EI+S  G  LT   DIE+EFI F
Subjt:  EERGEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISF

TrEMBL top hitse value%identityAlignment
A0A438DVQ8 LINE-1 retrotransposable element ORF2 protein2.5e-3539.78Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+     GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

A0A438IJB1 Transposon TX1 uncharacterized 149 kDa protein3.3e-3540.32Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+   S GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

A0A438J9S5 Transposon TX1 uncharacterized 149 kDa protein5.6e-3539.78Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+     GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

A0A438JK46 LINE-1 retrotransposable element ORF2 protein2.5e-3539.78Show/hide
Query:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
        L R TS+H PI L     +WGP+PFRF N+WL H  F      WW+     GW GH F++KLK +K +LK+WN   FG+ KE++  +  +LS ID  E+ 
Subjt:  LERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER

Query:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY
        G ++   +  RT+ R +L  + + EE+ WRQ+ ++KW  EGD N+ FFHR+    R +  I  +IS  G +L +  DI +E ++F+
Subjt:  GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFY

A0A6J1E2G6 uncharacterized protein LOC1110254051.2e-3743.09Show/hide
Query:  SRRLERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYK
        ++R+ R TS+H+PI L  G+N WG +PFRF N+WLSH++F   ++ WW + P  GW GHG + KLK LK  +K W  + F     Q++ L   ++ +D  
Subjt:  SRRLERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYK

Query:  EERGEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISF
        E    ++      R   +  L S+   EE  WRQRCK KW  EGD NT FFHR +A  RR+  I EI+S  G  LT   DIE+EFI F
Subjt:  EERGEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.5e-0828.36Show/hide
Query:  FRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEERGEISDQDLSRRTVIRAKLFSLAVN
        FR+ +   +H +F  ++   W+    +G       + LK  KK  K  N++ FGN + +       L  I   +     SD       V R K    A  
Subjt:  FRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEERGEISDQDLSRRTVIRAKLFSLAVN

Query:  EEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRK
         E  +RQ+ ++KW  +GD NT FFH+++ AN+ K
Subjt:  EEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCATGTATGTCTCATCTCGTAGACTTGAGCGAATCACCTCAAACCACTACCCCATCAGCCTCTCATTGGGTAAAAATCAATGGGGCCCTTCTCCTTTTAGATT
CCTCAACGTTTGGCTCTCCCACCAATCCTTTGCTGCCACAGTCGATCGATGGTGGAAATCCTCTCCTTCTATTGGTTGGTCGGGGCATGGATTTATCCAAAAATTAAAAG
GCCTCAAGAAGGAGCTCAAGCAATGGAACCAGAAAGTTTTTGGCAACCAAAAGGAACAACGTGATAGATTGGGTCGTGAACTCTCTGACATTGATTATAAAGAAGAAAGA
GGCGAGATATCCGATCAAGATCTTTCCAGAAGAACTGTCATTAGGGCGAAATTGTTCTCTTTAGCGGTTAATGAGGAAATCATGTGGCGCCAAAGATGCAAGCTGAAGTG
GTTTATGGAAGGGGATGTAAACACAGCCTTTTTTCACCGTTTGGTTGCTGCTAATCGACGAAAATGCTCCATTCACGAGATTATATCAGCCACGGGTAATAGCCTCACTA
GTGATGTTGATATCGAAAAGGAGTTTATATCCTTTTATAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCATGTATGTCTCATCTCGTAGACTTGAGCGAATCACCTCAAACCACTACCCCATCAGCCTCTCATTGGGTAAAAATCAATGGGGCCCTTCTCCTTTTAGATT
CCTCAACGTTTGGCTCTCCCACCAATCCTTTGCTGCCACAGTCGATCGATGGTGGAAATCCTCTCCTTCTATTGGTTGGTCGGGGCATGGATTTATCCAAAAATTAAAAG
GCCTCAAGAAGGAGCTCAAGCAATGGAACCAGAAAGTTTTTGGCAACCAAAAGGAACAACGTGATAGATTGGGTCGTGAACTCTCTGACATTGATTATAAAGAAGAAAGA
GGCGAGATATCCGATCAAGATCTTTCCAGAAGAACTGTCATTAGGGCGAAATTGTTCTCTTTAGCGGTTAATGAGGAAATCATGTGGCGCCAAAGATGCAAGCTGAAGTG
GTTTATGGAAGGGGATGTAAACACAGCCTTTTTTCACCGTTTGGTTGCTGCTAATCGACGAAAATGCTCCATTCACGAGATTATATCAGCCACGGGTAATAGCCTCACTA
GTGATGTTGATATCGAAAAGGAGTTTATATCCTTTTATAAATAG
Protein sequenceShow/hide protein sequence
MKAMYVSSRRLERITSNHYPISLSLGKNQWGPSPFRFLNVWLSHQSFAATVDRWWKSSPSIGWSGHGFIQKLKGLKKELKQWNQKVFGNQKEQRDRLGRELSDIDYKEER
GEISDQDLSRRTVIRAKLFSLAVNEEIMWRQRCKLKWFMEGDVNTAFFHRLVAANRRKCSIHEIISATGNSLTSDVDIEKEFISFYK