; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024147 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024147
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:785991..788132
RNA-Seq ExpressionLag0024147
SyntenyLag0024147
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]6.2e-7035.16Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        + + FWDPV+E I  +L  W+   +S GGR TLI+S L+ MP YF S+F+IP  VA +IE+  R FLW G G+G R  HLV WD V  P S GGLG   +
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N++   RW S   PW+ IA + + F   TR+ VG G++ RFW+DLW    PL  ++P + 
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR
        R+   K A +  +   +   +W+   RR  ++ +      +   L RL                                                 P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SP+IC +CMK  E+  HL LHC     +W+R   S  +    P S+ + L     G G   +  VLW+N+  
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        AI+W +WRERN+RIF DK+       DS+    S W+   KVF      M+ L W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

CAN72359.1 hypothetical protein VITISV_000131 [Vitis vinifera]1.8e-6934.73Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        + + FWDPV+E I  +L  W+   +S GGR TLI+S L+ MP YF S+F+IP  VA +IE+  R FLW G G+G R  HLV WD V  P S GGLG   +
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N++   RW S   PW+ IA + + F   TR+ VG G++ RFW+DLW    PL  ++P + 
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR
        R+   K A +  +   +   +W+   RR  ++ +      +     RL                                                 P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SP+IC +CMK  E+  HL LHC     +W+R   S  +    P S+ + L     G G   +  VLW+N+  
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        A++W +WRERN+RIF DK+       DS+    S W+   KVF      M+ L W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

CAN75028.1 hypothetical protein VITISV_026823 [Vitis vinifera]1.1e-6935.82Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        +   FWDPV+E I ++L  W+   +S GGR TLI+S LS +P YF S+F++P  VA +IE+  R FLW G G+G R  HLVRWD V  P ++GGLG+ ++
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N L   RW S   PW+ IA + + F   TRY VG G++ RFWEDLW    PL  ++P ++
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR------AEE-------------------------KTAGRRPVHSDLGRLD-------------------PKR
        R+ + K  ++  +   S    W+LN RR       E+                          ++G   V S    L                    P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR------AEE-------------------------KTAGRRPVHSDLGRLD-------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SPNIC++CMK  ES  HL LHC     +W R      +    P S+ + +    +G G   +  VLW+ ++ 
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        A+I  +W ERN++IF DK+    +  DS+   AS W+   K F      +IHL W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

RVW15726.1 putative ribonuclease H protein [Vitis vinifera]2.8e-7036.59Show/hide
Query:  FWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKN
        FWDPV+E I  +L  W+   +S GGR TL+ S LS +P YF S+F+IP  VA +IE+  R FLW G G+G R  HLVRW+ V+ P S+GGLGI  +  +N
Subjt:  FWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKN

Query:  AALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIYRLSM
         ALL KWLWRF  E  +LW +VI S YG   N +  N +   RW S   PW+ IA   + F  +TR+ VG G + RFWEDLW     LK+++P ++R+ M
Subjt:  AALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIYRLSM

Query:  AKEATVFELWNGS---TWDLNLRR---AEEKTAGRRPVHS-DLGRLD----------------------------------------------PKRVKFF
         K   +  +   S   +W+ N RR     E     R +HS D   L                                               P +VK F
Subjt:  AKEATVFELWNGS---TWDLNLRR---AEEKTAGRRPVHS-DLGRLD----------------------------------------------PKRVKFF

Query:  LWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIW
        +W +A   +NT D +Q R     ISPNIC +CM+Q ESA HL LHC     +W+R      +    P S+ + +    +G G   +  +LW+N++ A+IW
Subjt:  LWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIW

Query:  HLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
         +WRERN+RIF DK+       DS+   AS W+     F      ++ L W
Subjt:  HLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.8e-6934.73Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        + + FWDPV+E I  +L  W+   +S GGR TLI+S L+ MP YF S+F+IP  VA +IE+  R FLW G G+G R  HLV WD V  P S GGLG   +
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N++   RW S   PW+ IA + + F   TR+ VG G++ RFW+DLW    PL  ++P + 
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR
        R+   K A +  +   +   +W+   RR  ++ +      +     RL                                                 P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SP+IC +CMK  E+  HL LHC     +W+R   S  +    P S+ + L     G G   +  VLW+N+  
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        A++W +WRERN+RIF DK+       DS+    S W+   KVF      M+ L W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

TrEMBL top hitse value%identityAlignment
A0A438BXJ5 Putative ribonuclease H protein1.3e-7036.59Show/hide
Query:  FWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKN
        FWDPV+E I  +L  W+   +S GGR TL+ S LS +P YF S+F+IP  VA +IE+  R FLW G G+G R  HLVRW+ V+ P S+GGLGI  +  +N
Subjt:  FWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKN

Query:  AALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIYRLSM
         ALL KWLWRF  E  +LW +VI S YG   N +  N +   RW S   PW+ IA   + F  +TR+ VG G + RFWEDLW     LK+++P ++R+ M
Subjt:  AALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIYRLSM

Query:  AKEATVFELWNGS---TWDLNLRR---AEEKTAGRRPVHS-DLGRLD----------------------------------------------PKRVKFF
         K   +  +   S   +W+ N RR     E     R +HS D   L                                               P +VK F
Subjt:  AKEATVFELWNGS---TWDLNLRR---AEEKTAGRRPVHS-DLGRLD----------------------------------------------PKRVKFF

Query:  LWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIW
        +W +A   +NT D +Q R     ISPNIC +CM+Q ESA HL LHC     +W+R      +    P S+ + +    +G G   +  +LW+N++ A+IW
Subjt:  LWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIW

Query:  HLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
         +WRERN+RIF DK+       DS+   AS W+     F      ++ L W
Subjt:  HLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein8.7e-7034.73Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        + + FWDPV+E I  +L  W+   +S GGR TLI+S L+ MP YF S+F+IP  VA +IE+  R FLW G G+G R  HLV WD V  P S GGLG   +
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N++   RW S   PW+ IA + + F   TR+ VG G++ RFW+DLW    PL  ++P + 
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR
        R+   K A +  +   +   +W+   RR  ++ +      +     RL                                                 P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SP+IC +CMK  E+  HL LHC     +W+R   S  +    P S+ + L     G G   +  VLW+N+  
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        A++W +WRERN+RIF DK+       DS+    S W+   KVF      M+ L W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

A5BCI7 Reverse transcriptase domain-containing protein3.0e-7035.16Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        + + FWDPV+E I  +L  W+   +S GGR TLI+S L+ MP YF S+F+IP  VA +IE+  R FLW G G+G R  HLV WD V  P S GGLG   +
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N++   RW S   PW+ IA + + F   TR+ VG G++ RFW+DLW    PL  ++P + 
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR
        R+   K A +  +   +   +W+   RR  ++ +      +   L RL                                                 P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SP+IC +CMK  E+  HL LHC     +W+R   S  +    P S+ + L     G G   +  VLW+N+  
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        AI+W +WRERN+RIF DK+       DS+    S W+   KVF      M+ L W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

A5BUT3 Reverse transcriptase domain-containing protein5.1e-7035.82Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        +   FWDPV+E I ++L  W+   +S GGR TLI+S LS +P YF S+F++P  VA +IE+  R FLW G G+G R  HLVRWD V  P ++GGLG+ ++
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY
          +N ALL KWLWR+  E  ALW +VI S YG   N +  N L   RW S   PW+ IA + + F   TRY VG G++ RFWEDLW    PL  ++P ++
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYG---NDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCIY

Query:  RLSMAKEATVFELWNGS---TWDLNLRR------AEE-------------------------KTAGRRPVHSDLGRLD-------------------PKR
        R+ + K  ++  +   S    W+LN RR       E+                          ++G   V S    L                    P +
Subjt:  RLSMAKEATVFELWNGS---TWDLNLRR------AEE-------------------------KTAGRRPVHSDLGRLD-------------------PKR

Query:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR
        VK F+W +A   +NT D +Q R     +SPNIC++CMK  ES  HL LHC     +W R      +    P S+ + +    +G G   +  VLW+ ++ 
Subjt:  VKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTR

Query:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
        A+I  +W ERN++IF DK+    +  DS+   AS W+   K F      +IHL W
Subjt:  AIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

A5C377 Uncharacterized protein8.7e-7034.87Show/hide
Query:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL
        + + FWDPV+E I  +L  W+   +S GGR TLI+S L+ MP YF S+FRIP  VA +IE+  R FLW G G+G R  HLV WD V  P S GGLG   +
Subjt:  RVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKG-GDGTRGSHLVRWDFVTTPLSLGGLGIDDL

Query:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDF----IRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCI
          +N ALL KWLWR+  E  ALW +VI S YG+      + N++   RW S   PW+ IA + + F   TR+ VG G++ RFW+DLW    PL  ++P +
Subjt:  RAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDF----IRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPCI

Query:  YRLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PK
          +   K A +  +   S   +W+ N RR   + +      +   L RL                                                 P 
Subjt:  YRLSMAKEATVFELWNGS---TWDLNLRR--AEEKTAGRRPVHSDLGRLD------------------------------------------------PK

Query:  RVKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNST
        +VK F+W +A   +NT D +Q R     +SPNIC +CMK  E+  HL LHC     +W+R      +    P S+ +       G G   +  VLW+++ 
Subjt:  RVKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNST

Query:  RAIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW
         A++W +WRERN+RIF DK+       DS++  AS W+   KVF      M+ L W
Subjt:  RAIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYSTAMIHLHW

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657502.8e-3327.76Show/hide
Query:  VLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKNAALLA
        +LE + ++++ W+   +S  GR TL K+VLSSMPV+  S   +P  +   +++  R FLW      +  HLV+W  V +P   GGLG+   ++ N AL++
Subjt:  VLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKNAALLA

Query:  KWLWRFEMEPDALWRRVIHSKYGNDFIRNHLAYKRW----QSSSSPWRDIASMARFFKTH-TRYKVGRGNKARFWEDLWLSYIPLKE----RFPCIYRLS
        K  WR   E ++LW  V+  KY    IR+     RW     S SS WR IA   R   +H   +  G G + RFW D W+S  PL E      P      
Subjt:  KWLWRFEMEPDALWRRVIHSKYGNDFIRNHLAYKRW----QSSSSPWRDIASMARFFKTH-TRYKVGRGNKARFWEDLWLSYIPLKE----RFPCIYRLS

Query:  MAKE--------------------------ATVFELWNGSTWDLNLRRAEEKTAGRRPVHSDLGRLD------------------PKRVKFFLWSLALNG
        +AK+                          A V +L  G+   L+ + +++     R  +  L   +                  P+RVK FLW +    
Subjt:  MAKE--------------------------ATVFELWNGSTWDLNLRRAEEKTAGRRPVHSDLGRLD------------------PKRVKFFLWSLALNG

Query:  INTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIWHLWRERNS
        + T ++   R  S   + N+C +C    ES  H+L  C     +W R       Q     S+  WL + L  G   G   + W      IIW  W+ R  
Subjt:  INTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIWHLWRERNS

Query:  RIFADKS
         IF + +
Subjt:  RIFADKS

P93295 Uncharacterized mitochondrial protein AtMg003103.8e-0627.03Show/hide
Query:  SMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWD-FVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNH
        ++PVY  S FR+   + K++      F W   +  R    V W     +    GGLG  DL   N ALLAK  +R   +P  L  R++ S+Y       H
Subjt:  SMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWD-FVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNH

Query:  LAYKRWQSSSSP---WRDIASMARFFKTHTRYKVGRGNKARFWEDLWL
         +       + P   WR I              +G G   + W D W+
Subjt:  LAYKRWQSSSSP---WRDIASMARFFKTHTRYKVGRGNKARFWEDLWL

Arabidopsis top hitse value%identityAlignment
AT1G45063.1 copper ion binding;electron carriers2.7e-0728.43Show/hide
Query:  RFSSLQIS-PNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPI-SVVNWLKEALEGGGLKGKARVLWRNSTRAIIWHLWRERNSRIFADKS
        RF S  I  P++C++C   +E+  H+   C F+++VW+ F  +  V   +       WL+          K   + + + +A ++H+WRERN R+ ++KS
Subjt:  RFSSLQIS-PNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPI-SVVNWLKEALEGGGLKGKARVLWRNSTRAIIWHLWRERNSRIFADKS

Query:  LP
         P
Subjt:  LP

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.0e-1424.46Show/hide
Query:  SFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKN
        S + P++E IR ++  W    +S  GR  LI SV+ S+  ++ S FR+P    KEI+     FLW G +       V W  V TP   GGLGI  L+  N
Subjt:  SFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKN

Query:  A---------ALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPC
                    L  W+W+       L  R + S +    I N      W  +   W  I  +           +G    A   E + +++ P + R   
Subjt:  A---------ALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLKERFPC

Query:  IYRLS-----------MAKEATVFELWNGSTWDLNLRRAEEKTAGRRPVHSD-------LGRLDPKRVKFFLWSLALNGINTMDKVQSRFSSLQISPNIC
        + R+             + E TV    NG  +       E   A R P                PK      W    N + T D++ S  +    S   C
Subjt:  IYRLS-----------MAKEATVFELWNGSTWDLNLRRAEEKTAGRRPVHSD-------LGRLDPKRVKFFLWSLALNGINTMDKVQSRFSSLQISPNIC

Query:  VMCMKQEESASHLLLHCDFANKV
        V+C    E+  HL   C ++ +V
Subjt:  VMCMKQEESASHLLLHCDFANKV

AT3G25270.1 Ribonuclease H-like superfamily protein1.2e-0725.55Show/hide
Query:  RVKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNST
        ++K FLW L    + T D ++ R   ++  P  C  C +++E++ HL   C +A +VW   G          I++   + E L    L  +   L+ N  
Subjt:  RVKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCMKQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNST

Query:  RAIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNW
          I+W LW+ RN  +F  KS+ +       +     W
Subjt:  RAIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNW

AT4G29090.1 Ribonuclease H-like superfamily protein1.4e-1922.02Show/hide
Query:  SMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNHL
        ++P Y  + F +P  V K+I      F W+     +G H   WD ++   + GG+G  D+ A N ALL K +WR    P++L  +V  S+Y +    + L
Subjt:  SMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNHL

Query:  AYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLK-----ERFPCIYRLSMAKEATVFELWNGS---------------------
                S  W+ I +     +   R  VG G     W   WL   P       +R P     S++    V +L + S                     
Subjt:  AYKRWQSSSSPWRDIASMARFFKTHTRYKVGRGNKARFWEDLWLSYIPLK-----ERFPCIYRLSMAKEATVFELWNGS---------------------

Query:  --------------TWD-------------------LNLRRAEEKTA--GRRPVHSDLGRLDPK-RVKFFLWSLALNGINTMDKVQSRFSSLQISPNICV
                      TWD                   +N R + ++ +     P++  + +     +++ FLW    N +     +  R  S +   + C+
Subjt:  --------------TWD-------------------LNLRRAEEKTA--GRRPVHSDLGRLDPK-RVKFFLWSLALNGINTMDKVQSRFSSLQISPNICV

Query:  MCMKQEESASHLLLHCDFANKVW--NRFGDSFGVQLCKPISV-VNWLKEALEGGGLKGKARVL--WRNSTRAIIWHLWRERNSRIF
         C   +E+ +HLL  C FA   W  +      G +    I V + W+     G     KA  L  W      ++W LW+ RN  +F
Subjt:  MCMKQEESASHLLLHCDFANKVW--NRFGDSFGVQLCKPISV-VNWLKEALEGGGLKGKARVL--WRNSTRAIIWHLWRERNSRIF

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0727.03Show/hide
Query:  SMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWD-FVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNH
        ++PVY  S FR+   + K++      F W   +  R    V W     +    GGLG  DL   N ALLAK  +R   +P  L  R++ S+Y       H
Subjt:  SMPVYFFSIFRIPVGVAKEIEKFFRRFLWKGGDGTRGSHLVRWD-FVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNH

Query:  LAYKRWQSSSSP---WRDIASMARFFKTHTRYKVGRGNKARFWEDLWL
         +       + P   WR I              +G G   + W D W+
Subjt:  LAYKRWQSSSSP---WRDIASMARFFKTHTRYKVGRGNKARFWEDLWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGCTGCTGCTTTGTGATGGCTGCAAAACAGAAGGCCTTCCTTTTAACTACCTGGGTGTTACCGTGGGTGGTAGACCAAGGGTGGCTTCTTTCTGGGACCCGTGC
TGGAAACTATTCGAGCCAAATTAGCTCTTTGGAAGGGACAAGGGTGGCTTCTTTCTGGGACCCGGTGCTGGAAACTATTCGAGCCAAATTAGCTCTTTGGAAGGGATTCC
CAATTTCCAAAGGAGGTAGAACTACTCTCATAAAATCAGTTCTTTCTAGTATGCCAGTCTATTTCTTCTCCATTTTTCGTATTCCTGTGGGTGTTGCCAAGGAGATAGAA
AAATTTTTTAGAAGGTTTCTGTGGAAGGGAGGGGACGGCACGCGTGGTTCTCACTTGGTGAGGTGGGATTTTGTTACTACCCCGCTTTCTTTAGGAGGTCTGGGAATCGA
TGACTTAAGAGCCAAAAACGCAGCCCTGCTAGCTAAATGGTTATGGAGGTTTGAAATGGAGCCTGATGCGTTGTGGAGGAGAGTAATCCATAGCAAATATGGGAATGATT
TTATTCGCAACCACCTTGCTTATAAACGGTGGCAGTCTTCGAGTAGCCCCTGGAGGGACATTGCTAGCATGGCCAGGTTCTTCAAGACTCATACCAGATATAAGGTGGGC
AGGGGTAATAAGGCTAGGTTTTGGGAGGATTTATGGCTCTCCTACATACCCTTAAAGGAGAGGTTTCCTTGTATCTACCGCCTCTCTATGGCTAAGGAAGCTACAGTCTT
TGAGCTCTGGAATGGTAGCACTTGGGACCTTAATCTGAGGAGGGCAGAGGAGAAGACTGCTGGAAGAAGACCTGTGCACTCAGATCTAGGAAGGCTCGATCCCAAGAGAG
TTAAATTTTTCTTATGGTCCTTGGCGTTAAATGGTATTAACACTATGGATAAAGTTCAAAGCAGATTTTCGTCCCTCCAAATATCTCCCAATATATGTGTGATGTGTATG
AAGCAAGAAGAATCTGCCTCCCATCTCCTGTTACACTGTGATTTTGCTAATAAGGTCTGGAACAGGTTTGGGGATTCTTTTGGTGTTCAGTTATGCAAGCCGATCAGTGT
GGTCAACTGGTTGAAAGAAGCTCTCGAAGGTGGTGGGTTGAAAGGAAAAGCTAGAGTTTTGTGGCGTAATAGTACTAGAGCGATCATTTGGCATCTTTGGAGGGAAAGAA
ATTCGAGGATTTTTGCTGATAAGTCCTTACCCTTTAATATTTTTTGTGATAGTGTACAGCTCTCGGCCTCTAATTGGAGTGCCCTAGATAAGGTTTTCTCTAACTACTCC
ACGGCCATGATTCACCTTCATTGGAAGTTTTCTGTTTCTTCTCAAAAAAAAAACGAGTATCCAATGGGTACTTCCTCGCCTTCGATAATCTTGCTACGCAGTGCAGCTAA
CATAGGGTCATGGTGTTGTTCTTCAACCACAATGCTCGTCTTTAGACCGCCCACCAAACTAATTGCGACAAACTCTAAGGCACTGGGCAGTCGTGATAAGGCGTCAACCA
CTATGTTTTCAATTCCCGCCAAGGAGATAAGGTCTCCATTTTTGTATAGCCATAACAATGGCCATAAGCTTGCGTTCGTAGACAGCTTTGGCTCGGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACGCTGCTGCTTTGTGATGGCTGCAAAACAGAAGGCCTTCCTTTTAACTACCTGGGTGTTACCGTGGGTGGTAGACCAAGGGTGGCTTCTTTCTGGGACCCGTGC
TGGAAACTATTCGAGCCAAATTAGCTCTTTGGAAGGGACAAGGGTGGCTTCTTTCTGGGACCCGGTGCTGGAAACTATTCGAGCCAAATTAGCTCTTTGGAAGGGATTCC
CAATTTCCAAAGGAGGTAGAACTACTCTCATAAAATCAGTTCTTTCTAGTATGCCAGTCTATTTCTTCTCCATTTTTCGTATTCCTGTGGGTGTTGCCAAGGAGATAGAA
AAATTTTTTAGAAGGTTTCTGTGGAAGGGAGGGGACGGCACGCGTGGTTCTCACTTGGTGAGGTGGGATTTTGTTACTACCCCGCTTTCTTTAGGAGGTCTGGGAATCGA
TGACTTAAGAGCCAAAAACGCAGCCCTGCTAGCTAAATGGTTATGGAGGTTTGAAATGGAGCCTGATGCGTTGTGGAGGAGAGTAATCCATAGCAAATATGGGAATGATT
TTATTCGCAACCACCTTGCTTATAAACGGTGGCAGTCTTCGAGTAGCCCCTGGAGGGACATTGCTAGCATGGCCAGGTTCTTCAAGACTCATACCAGATATAAGGTGGGC
AGGGGTAATAAGGCTAGGTTTTGGGAGGATTTATGGCTCTCCTACATACCCTTAAAGGAGAGGTTTCCTTGTATCTACCGCCTCTCTATGGCTAAGGAAGCTACAGTCTT
TGAGCTCTGGAATGGTAGCACTTGGGACCTTAATCTGAGGAGGGCAGAGGAGAAGACTGCTGGAAGAAGACCTGTGCACTCAGATCTAGGAAGGCTCGATCCCAAGAGAG
TTAAATTTTTCTTATGGTCCTTGGCGTTAAATGGTATTAACACTATGGATAAAGTTCAAAGCAGATTTTCGTCCCTCCAAATATCTCCCAATATATGTGTGATGTGTATG
AAGCAAGAAGAATCTGCCTCCCATCTCCTGTTACACTGTGATTTTGCTAATAAGGTCTGGAACAGGTTTGGGGATTCTTTTGGTGTTCAGTTATGCAAGCCGATCAGTGT
GGTCAACTGGTTGAAAGAAGCTCTCGAAGGTGGTGGGTTGAAAGGAAAAGCTAGAGTTTTGTGGCGTAATAGTACTAGAGCGATCATTTGGCATCTTTGGAGGGAAAGAA
ATTCGAGGATTTTTGCTGATAAGTCCTTACCCTTTAATATTTTTTGTGATAGTGTACAGCTCTCGGCCTCTAATTGGAGTGCCCTAGATAAGGTTTTCTCTAACTACTCC
ACGGCCATGATTCACCTTCATTGGAAGTTTTCTGTTTCTTCTCAAAAAAAAAACGAGTATCCAATGGGTACTTCCTCGCCTTCGATAATCTTGCTACGCAGTGCAGCTAA
CATAGGGTCATGGTGTTGTTCTTCAACCACAATGCTCGTCTTTAGACCGCCCACCAAACTAATTGCGACAAACTCTAAGGCACTGGGCAGTCGTGATAAGGCGTCAACCA
CTATGTTTTCAATTCCCGCCAAGGAGATAAGGTCTCCATTTTTGTATAGCCATAACAATGGCCATAAGCTTGCGTTCGTAGACAGCTTTGGCTCGGTGTAA
Protein sequenceShow/hide protein sequence
MTRCCFVMAAKQKAFLLTTWVLPWVVDQGWLLSGTRAGNYSSQISSLEGTRVASFWDPVLETIRAKLALWKGFPISKGGRTTLIKSVLSSMPVYFFSIFRIPVGVAKEIE
KFFRRFLWKGGDGTRGSHLVRWDFVTTPLSLGGLGIDDLRAKNAALLAKWLWRFEMEPDALWRRVIHSKYGNDFIRNHLAYKRWQSSSSPWRDIASMARFFKTHTRYKVG
RGNKARFWEDLWLSYIPLKERFPCIYRLSMAKEATVFELWNGSTWDLNLRRAEEKTAGRRPVHSDLGRLDPKRVKFFLWSLALNGINTMDKVQSRFSSLQISPNICVMCM
KQEESASHLLLHCDFANKVWNRFGDSFGVQLCKPISVVNWLKEALEGGGLKGKARVLWRNSTRAIIWHLWRERNSRIFADKSLPFNIFCDSVQLSASNWSALDKVFSNYS
TAMIHLHWKFSVSSQKKNEYPMGTSSPSIILLRSAANIGSWCCSSTTMLVFRPPTKLIATNSKALGSRDKASTTMFSIPAKEIRSPFLYSHNNGHKLAFVDSFGSV