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Lag0024153 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024153
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein TOPLESS
Genome locationchr10:839213..846026
RNA-Seq ExpressionLag0024153
SyntenyLag0024153
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048731 - system development (biological process)
InterPro domainsIPR027728 - Topless family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036524.1 Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1058.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

XP_022153396.1 protein TOPLESS [Momordica charantia]1.4e-1058.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PKTV+RT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

XP_022997768.1 protein TOPLESS-like [Cucurbita maxima]1.8e-1058.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

XP_023523502.1 protein TOPLESS [Cucurbita pepo subsp. pepo]1.8e-1058.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

XP_038896551.1 protein TOPLESS [Benincasa hispida]6.2e-1159.72Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PKTVMRT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

TrEMBL top hitse value%identityAlignment
A0A0A0KTH7 Uncharacterized protein1.1e-1056.94Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SF  HGH        D PKTVMRT NQ S PM MDFHP+QQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

A0A6J1DKI7 protein TOPLESS6.7e-1158.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PKTV+RT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

A0A6J1GAU7 protein TOPLESS-like8.7e-1158.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

A0A6J1KEV5 protein TOPLESS-like8.7e-1158.33Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SFA HGH        D PK VMRT NQ S PM MDFHPVQQT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

A0A7J7FWA5 Uncharacterized protein1.5e-1056.94Show/hide
Query:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNLP+NVLP+SF+ HGH        D PKTV RT NQ S PM MDFHP+QQT LL+ + VG  AL   G R
Subjt:  KVNLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

SwissProt top hitse value%identityAlignment
Q0WV90 Topless-related protein 12.5e-0745.95Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +V+L +N+LP++F    HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

Q10NY2 Protein TPR37.3e-0753.85Show/hide
Query:  KVNLPINVLPISF-ADHGH---DSPKTVMRTPNQWSPPMCMDFHPVQQTLLI
        +VNLP+N+LP+++   H +   D  K V RT +Q S PM MDFHPVQQTLL+
Subjt:  KVNLPINVLPISF-ADHGH---DSPKTVMRTPNQWSPPMCMDFHPVQQTLLI

Q27GK7 Topless-related protein 41.6e-0638.24Show/hide
Query:  NLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPRASV--RRANVGCLSCFRVGLE-SLGASYLA
        NLP+NVLP+++    H        D PK V R  +Q S    MDFHPVQQT LL+ + +G  A+   G R  +  R   V  L+   V L+ SL + Y A
Subjt:  NLPINVLPISFADHGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPRASV--RRANVGCLSCFRVGLE-SLGASYLA

Query:  HI
         +
Subjt:  HI

Q94AI7 Protein TOPLESS1.7e-0848.65Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

Arabidopsis top hitse value%identityAlignment
AT1G15750.1 Transducin family protein / WD-40 repeat family protein1.2e-0948.65Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

AT1G15750.2 Transducin family protein / WD-40 repeat family protein1.2e-0948.65Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

AT1G15750.3 Transducin family protein / WD-40 repeat family protein1.2e-0948.65Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

AT1G15750.4 Transducin family protein / WD-40 repeat family protein1.2e-0948.65Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +VNL +N+LP+SF+   HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR

AT1G80490.1 TOPLESS-related 11.8e-0845.95Show/hide
Query:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR
        +V+L +N+LP++F    HGH        D PKTV RT +Q S PM MDFHP++QT LL+ + VG   L   G R
Subjt:  KVNLPINVLPISFAD--HGH--------DSPKTVMRTPNQWSPPMCMDFHPVQQT-LLIRSGVGYSALVSDGPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTAAATCTACCGATTAATGTTCTGCCCATATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACCGAATCAATGGTCACCTCCAATGTG
CATGGATTTTCATCCGGTCCAACAAACTCTGCTAATAAGGTCGGGGGTGGGGTATTCTGCCTTAGTTTCTGATGGGCCCAGAGCATCTGTGCGTCGGGCCAACGTTGGGT
GTCTTTCTTGCTTTAGAGTAGGACTTGAAAGTCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCTGTA
TCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACGAATCAATGGTCACTCCAATGTGCATGGATTTTCATCCAGCCAACAAACTCTGCTATGGAT
TGGCGGTACCAAAGCGAGCCTTTTATTTATATATATGTTGATCTACACAAATTCTGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAGAC
GCGAACTGTTCAACCGACAAGGCTTTGCACTTCGGCCCCCAAGAATACCACCTCAAGGTGAAAAGATTCGAACTTGTGGCCCTCTGTACCAAAAAGATGTGCTGACCAAC
TCTACACCTTGTCTGACCTCCCTAGAGCATATAGATCCACCCAATCGACAACAGTCAAACCAAATCCACTTTATCGAGTTTACAAAGGAAATGGATGAGAATCCCATGAT
ACAATCTTCTCGTATGTCGATTTACCAAATCAATGCCTTGAGCTGTTCAACCATACCTCCAACTTGTGATCAGACTTTGAGCTCCGAAGGGCTATCTGATCCGATCAACT
ACGTAAGTCGTAGTTCACGTACTCTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTAAATCTACCGATTAATGTTCTGCCCATATCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACCGAATCAATGGTCACCTCCAATGTG
CATGGATTTTCATCCGGTCCAACAAACTCTGCTAATAAGGTCGGGGGTGGGGTATTCTGCCTTAGTTTCTGATGGGCCCAGAGCATCTGTGCGTCGGGCCAACGTTGGGT
GTCTTTCTTGCTTTAGAGTAGGACTTGAAAGTCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCTGTA
TCATTTGCTGATCATGGTCATGATTCGCCAAAGACTGTTATGCGAACACGAATCAATGGTCACTCCAATGTGCATGGATTTTCATCCAGCCAACAAACTCTGCTATGGAT
TGGCGGTACCAAAGCGAGCCTTTTATTTATATATATGTTGATCTACACAAATTCTGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAGAC
GCGAACTGTTCAACCGACAAGGCTTTGCACTTCGGCCCCCAAGAATACCACCTCAAGGTGAAAAGATTCGAACTTGTGGCCCTCTGTACCAAAAAGATGTGCTGACCAAC
TCTACACCTTGTCTGACCTCCCTAGAGCATATAGATCCACCCAATCGACAACAGTCAAACCAAATCCACTTTATCGAGTTTACAAAGGAAATGGATGAGAATCCCATGAT
ACAATCTTCTCGTATGTCGATTTACCAAATCAATGCCTTGAGCTGTTCAACCATACCTCCAACTTGTGATCAGACTTTGAGCTCCGAAGGGCTATCTGATCCGATCAACT
ACGTAAGTCGTAGTTCACGTACTCTTCCTTGA
Protein sequenceShow/hide protein sequence
MKVNLPINVLPISFADHGHDSPKTVMRTPNQWSPPMCMDFHPVQQTLLIRSGVGYSALVSDGPRASVRRANVGCLSCFRVGLESLGASYLAHIPVVTPIGVNLPVNVLPV
SFADHGHDSPKTVMRTRINGHSNVHGFSSSQQTLLWIGGTKASLLFIYMLIYTNSEVQSWHWHQMHFTCYGNRRELFNRQGFALRPPRIPPQGEKIRTCGPLYQKDVLTN
STPCLTSLEHIDPPNRQQSNQIHFIEFTKEMDENPMIQSSRMSIYQINALSCSTIPPTCDQTLSSEGLSDPINYVSRSSRTLP