; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024156 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024156
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr10:854882..855391
RNA-Seq ExpressionLag0024156
SyntenyLag0024156
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]5.2e-6076.58Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN   AK TM+DSG TH+FISEQEARRL L +EKD+GKMK VN EALPIVG SK+V LKLG W G+VD VVVRMDDFDVVLGMEFL++HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEEP
        VIP+PL KCMIV  NSPTVV  SIKQP  +RMISAL LKKGLNR+EPTFMAIPMVE+P
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEEP

XP_022972955.1 uncharacterized protein LOC111471475 [Cucurbita maxima]1.0e-5569.43Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN  L+K T+IDSG TH+FI +QEARRLGL + KD GKMK VNSEALPIVG SK+VP K+G+W G +DLVVVRMD  DV+LGMEFLL+HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE
        VIP+PL KC+++ D +PTV+P SIKQP  +RMISA+PLK+GL R+EPTFMAIP++EE
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]3.8e-5870.7Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN  L+K T+IDSG TH+FI++QEARRLGL + KD GKMK VNSEALPIVG SK VP K+G+W G +DLVVVRMDDFDVVLGMEFLL+HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE
        VIP+PL KC+++ D +PTV+P SIKQP  +RMISA+ LK+GL R+EPTFMAIP++EE
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE

XP_023526180.1 uncharacterized protein LOC111789739 [Cucurbita pepo subsp. pepo]1.9e-5770.06Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN  L+K T+IDSG TH+FI++QEARRLGL + KD GKMK VNSEALPIVG SK VP K+G+W G +DLVVVRMDDFDVVLGMEFLL+HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE
        VIP+PL KC+++ D +P V+P SIKQP  +RMISA+ LK+GL R+EPTFMAIP++EE
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]3.8e-5870.7Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN  L+K T+IDSG TH+FI++QEARRLGL + KD GKMK VNSEALPIVG SK VP K+G+W G +DLVVVRMDDFDVVLGMEFLL+HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE
        VIP+PL KC+++ D +PTV+P SIKQP  +RMISA+ LK+GL R+EPTFMAIP++EE
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE

TrEMBL top hitse value%identityAlignment
A0A6J1D906 Reverse transcriptase2.5e-6076.58Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN   AK TM+DSG TH+FISEQEARRL L +EKD+GKMK VN EALPIVG SK+V LKLG W G+VD VVVRMDDFDVVLGMEFL++HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEEP
        VIP+PL KCMIV  NSPTVV  SIKQP  +RMISAL LKKGLNR+EPTFMAIPMVE+P
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEEP

A0A6J1DK29 uncharacterized protein LOC1110218291.6e-5474.67Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN   AK  M+DSG TH+FISEQEA RL L +EKD+GKMK VNSEALPIVG SK+V LKLG W G+ D VVVRMDDFDVVLGMEFL++HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFM
        VIP+PL KCMIV  NSPTVV  SIKQP  +RMISAL LKKGLNR+EPTFM
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFM

A0A6J1IA31 uncharacterized protein LOC1114714754.9e-5669.43Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN  L+K T+IDSG TH+FI +QEARRLGL + KD GKMK VNSEALPIVG SK+VP K+G+W G +DLVVVRMD  DV+LGMEFLL+HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE
        VIP+PL KC+++ D +PTV+P SIKQP  +RMISA+PLK+GL R+EPTFMAIP++EE
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE

A0A6J1IEY4 uncharacterized protein LOC1114757337.1e-5566.67Show/hide
Query:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK
        E+GLMFVD  IN    + T+IDSG TH+FI++QEARRLGL + +D GKMK +NSEALPIVG SK+VP K+G+W G +DLVV RMDDFDVVLGMEFLL+HK
Subjt:  ERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHK

Query:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVE
        VIP+PL KC+++ D +PTV+P SIKQP  +RMISA+ LK+GL R+EPTF+AIP++E
Subjt:  VIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVE

A0A6J1JPK8 uncharacterized protein LOC1114886896.9e-5061.64Show/hide
Query:  MYERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQ
        + E+GLMFVD  IN   +K T+IDSG TH+FI++ +ARRLGL +EKD  KMK V S+ALPIVG SK+V  KLG W G +D VVVRM+DF+VVL M FLL+
Subjt:  MYERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQ

Query:  HKVIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE
        HKV P+PL KC+++ D++PT++P SIKQP  +RMIS + LK+GL +DEPTFMAIP++EE
Subjt:  HKVIPLPLTKCMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGAAAGGGGATTGATGTTTGTTGATGTCATCATCAATGGTGGACTTGCAAAGGGTACCATGATTGATTCAGGCACAACCCACAGTTTCATTTCCGAACAAGAAGC
CCGTAGGTTGGGATTAAAAGTTGAGAAAGATTCTGGCAAAATGAAAACGGTTAATTCAGAAGCCTTACCTATCGTGGGAACTTCCAAAAAGGTTCCATTAAAGTTGGGCG
AGTGGAAAGGCAATGTGGACCTCGTAGTGGTTCGCATGGATGATTTCGATGTGGTACTAGGAATGGAATTTCTCTTGCAGCATAAGGTGATCCCTTTACCACTCACCAAA
TGCATGATTGTCATTGATAACAGTCCCACCGTAGTCCCAGTGAGTATCAAGCAACCCAGCTACATGAGAATGATTTCGGCCTTACCGTTAAAGAAAGGACTTAATCGAGA
TGAACCTACCTTCATGGCCATTCCGATGGTCGAAGAACCCTGTATTATGTACAAAAAGCTCTCGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGAAAGGGGATTGATGTTTGTTGATGTCATCATCAATGGTGGACTTGCAAAGGGTACCATGATTGATTCAGGCACAACCCACAGTTTCATTTCCGAACAAGAAGC
CCGTAGGTTGGGATTAAAAGTTGAGAAAGATTCTGGCAAAATGAAAACGGTTAATTCAGAAGCCTTACCTATCGTGGGAACTTCCAAAAAGGTTCCATTAAAGTTGGGCG
AGTGGAAAGGCAATGTGGACCTCGTAGTGGTTCGCATGGATGATTTCGATGTGGTACTAGGAATGGAATTTCTCTTGCAGCATAAGGTGATCCCTTTACCACTCACCAAA
TGCATGATTGTCATTGATAACAGTCCCACCGTAGTCCCAGTGAGTATCAAGCAACCCAGCTACATGAGAATGATTTCGGCCTTACCGTTAAAGAAAGGACTTAATCGAGA
TGAACCTACCTTCATGGCCATTCCGATGGTCGAAGAACCCTGTATTATGTACAAAAAGCTCTCGACATGA
Protein sequenceShow/hide protein sequence
MYERGLMFVDVIINGGLAKGTMIDSGTTHSFISEQEARRLGLKVEKDSGKMKTVNSEALPIVGTSKKVPLKLGEWKGNVDLVVVRMDDFDVVLGMEFLLQHKVIPLPLTK
CMIVIDNSPTVVPVSIKQPSYMRMISALPLKKGLNRDEPTFMAIPMVEEPCIMYKKLST