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Lag0024159 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024159
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr10:877971..879620
RNA-Seq ExpressionLag0024159
SyntenyLag0024159
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035532.1 uncharacterized protein E6C27_scaffold285G001980 [Cucumis melo var. makuwa]8.0e-5261.24Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++   GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK +++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

KAA0037573.1 reverse transcriptase [Cucumis melo var. makuwa]6.2e-5261.8Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++  LGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK  ++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

KAA0051251.1 uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa]2.8e-5263.07Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLESRAAKPSSFERGDSSTGSVAQMEERVDG
        MS+A  LGK   +RLVE+EEQMLYL EVP S+RFLESRLEEIA + D IDAVAGRV G+ IQEL+ RV+ LE    +  S ERGDSSTGSVA +EERV  
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLESRAAKPSSFERGDSSTGSVAQMEERVDG

Query:  LDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
        LDSSQK +++M+  +SE+ +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+SV++VK+P+PKPFCG RD K L
Subjt:  LDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-5261.8Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++   GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK +++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAPTGGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]1.6e-5261.8Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++  LGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK +++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

TrEMBL top hitse value%identityAlignment
A0A5A7T3M3 Reverse transcriptase3.0e-5261.8Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++  LGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK  ++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

A0A5A7UCI7 Uncharacterized protein1.3e-5263.07Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLESRAAKPSSFERGDSSTGSVAQMEERVDG
        MS+A  LGK   +RLVE+EEQMLYL EVP S+RFLESRLEEIA + D IDAVAGRV G+ IQEL+ RV+ LE    +  S ERGDSSTGSVA +EERV  
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLESRAAKPSSFERGDSSTGSVAQMEERVDG

Query:  LDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
        LDSSQK +++M+  +SE+ +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+SV++VK+P+PKPFCG RD K L
Subjt:  LDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

A0A5A7UIP7 Reverse transcriptase6.0e-5361.8Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++   GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK +++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAPTGGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

A0A5D3BYE6 Reverse transcriptase7.8e-5361.8Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++  LGK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK +++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

A0A5D3C4R1 Reverse transcriptase3.9e-5261.24Show/hide
Query:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV
        MS++   GK   +RLVE+EEQMLYL EVPDS+R+LESRLEEI+ +T+ IDAVAGRV+G PIQEL+TRV+ LE+     +  ++ERGDSSTGSVA +EERV
Subjt:  MSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRVDGMPIQELITRVENLES--RAAKPSSFERGDSSTGSVAQMEERV

Query:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL
          LDSSQK +++M+  +SED +A LD+VR E+AD++A+++LTMRA+ NQAP GGA+ V++VK+P+PKPFCG RD K L
Subjt:  DGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKPFCGVRDTKTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGTAGGGAGAAAGACCGCCGAAAGAAGTAATGGAGGTTGGACTGCATTCTATGGAGGTATTGTTTGGTCTGGAGTGCCATCCATCTTTCTAGATGATGAAGCCCT
GTTTGCCAACATATCAGAGCCTAGTTGGCTCCTGAAATATAAGTCCGAAATCATGTCGGCAGCAAAACAGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAGG
AGCAGATGCTCTACCTGAGGGAAGTCCCTGATTCGGTTCGCTTCCTAGAATCTCGTCTTGAAGAGATTGCGACGAGGACAGACAAGATTGATGCGGTAGCTGGCCGCGTG
GATGGAATGCCCATCCAAGAGTTGATTACGAGGGTTGAAAACCTCGAGAGCAGAGCTGCGAAACCTAGCAGCTTCGAGCGTGGAGACAGCTCGACGGGCTCTGTTGCCCA
GATGGAGGAGCGTGTTGATGGTCTAGACAGCTCCCAAAAAGCGATAGTTCAGATGGTCACAGAACTGTCTGAAGATGTGAAAGCTGCCCTCGACATAGTCAGGGCCGAAG
TGGCGGATCTGAGCGCCAAGATAAACCTCACCATGAGAGCAGTGGGGAACCAAGCCCCGACAGGGGGTGCGGTTTCGGTTAACAAAGTAAAAGTCCCAAAACCAAAACCC
TTCTGTGGGGTTCGAGATACCAAAACCCTTCTGTGGGGGTCGAGTCAGAGGCGAAGACTGGCAAAGTTCATCAGTTGTGTGGTGTTCATGGAAAAGAAGGTGTCGCCAAA
CAAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTAGGGAGAAAGACCGCCGAAAGAAGTAATGGAGGTTGGACTGCATTCTATGGAGGTATTGTTTGGTCTGGAGTGCCATCCATCTTTCTAGATGATGAAGCCCT
GTTTGCCAACATATCAGAGCCTAGTTGGCTCCTGAAATATAAGTCCGAAATCATGTCGGCAGCAAAACAGTTGGGCAAGACCCATGTGGAACGATTGGTAGAGATCGAGG
AGCAGATGCTCTACCTGAGGGAAGTCCCTGATTCGGTTCGCTTCCTAGAATCTCGTCTTGAAGAGATTGCGACGAGGACAGACAAGATTGATGCGGTAGCTGGCCGCGTG
GATGGAATGCCCATCCAAGAGTTGATTACGAGGGTTGAAAACCTCGAGAGCAGAGCTGCGAAACCTAGCAGCTTCGAGCGTGGAGACAGCTCGACGGGCTCTGTTGCCCA
GATGGAGGAGCGTGTTGATGGTCTAGACAGCTCCCAAAAAGCGATAGTTCAGATGGTCACAGAACTGTCTGAAGATGTGAAAGCTGCCCTCGACATAGTCAGGGCCGAAG
TGGCGGATCTGAGCGCCAAGATAAACCTCACCATGAGAGCAGTGGGGAACCAAGCCCCGACAGGGGGTGCGGTTTCGGTTAACAAAGTAAAAGTCCCAAAACCAAAACCC
TTCTGTGGGGTTCGAGATACCAAAACCCTTCTGTGGGGGTCGAGTCAGAGGCGAAGACTGGCAAAGTTCATCAGTTGTGTGGTGTTCATGGAAAAGAAGGTGTCGCCAAA
CAAGTGGTAG
Protein sequenceShow/hide protein sequence
MSVGRKTAERSNGGWTAFYGGIVWSGVPSIFLDDEALFANISEPSWLLKYKSEIMSAAKQLGKTHVERLVEIEEQMLYLREVPDSVRFLESRLEEIATRTDKIDAVAGRV
DGMPIQELITRVENLESRAAKPSSFERGDSSTGSVAQMEERVDGLDSSQKAIVQMVTELSEDVKAALDIVRAEVADLSAKINLTMRAVGNQAPTGGAVSVNKVKVPKPKP
FCGVRDTKTLLWGSSQRRRLAKFISCVVFMEKKVSPNKW