; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024161 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024161
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr10:886994..887621
RNA-Seq ExpressionLag0024161
SyntenyLag0024161
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142520.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis sativus]2.7e-4692.08Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAK+MVRKMTKEGSVPDIGTFNSLI VICNSGEVDFCINI+HEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLLHC IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

XP_008462724.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucumis melo]6.6e-4590.1Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAK+MVRKMTKEG VPDIGTFNSLI VICNSGEVDFCINI+HEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLL+C IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

XP_022151697.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Momordica charantia]1.4e-4791.09Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAKNMVRKMTKEGSVPD+ TFNSLI+VICNSGEVDFCINIYHEVCKLGLCPDIN+YKIL+PATSKV RIDEAF+LLHCS+EDGHKPFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

XP_022988097.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Cucurbita maxima]1.9e-4490.1Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAKNMVRKMTKEGSVPD+GTFNSLI VIC+SGEVDFCINIYHEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLL+  IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

XP_038879743.1 pentatricopeptide repeat-containing protein At5g18390, mitochondrial [Benincasa hispida]1.0e-4591.09Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGY ESAK+MVRKMTKEGSVPDIGTFNSLI VICNSGEVDFCINI+HEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLLHC IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A0A0M105 Uncharacterized protein1.3e-4692.08Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAK+MVRKMTKEGSVPDIGTFNSLI VICNSGEVDFCINI+HEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLLHC IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

A0A1S3CJ74 pentatricopeptide repeat-containing protein At5g18390, mitochondrial3.2e-4590.1Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAK+MVRKMTKEG VPDIGTFNSLI VICNSGEVDFCINI+HEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLL+C IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

A0A5A7V4T7 Pentatricopeptide repeat-containing protein3.2e-4590.1Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAK+MVRKMTKEG VPDIGTFNSLI VICNSGEVDFCINI+HEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLL+C IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

A0A6J1DE73 pentatricopeptide repeat-containing protein At5g18390, mitochondrial6.9e-4891.09Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAKNMVRKMTKEGSVPD+ TFNSLI+VICNSGEVDFCINIYHEVCKLGLCPDIN+YKIL+PATSKV RIDEAF+LLHCS+EDGHKPFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

A0A6J1JC50 pentatricopeptide repeat-containing protein At5g18390, mitochondrial9.3e-4590.1Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA
        GLLNAGYLESAKNMVRKMTKEGSVPD+GTFNSLI VIC+SGEVDFCINIYHEVCKLGLCPDIN+YKILIPATSKV RIDEAFRLL+  IEDGH PFPSL 
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSLA

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
Q94JX6 Pentatricopeptide repeat-containing protein At5g18390, mitochondrial8.4e-3571.72Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSL
        GLLNAGYLESAK MV KMTK G VPDI TFN LI  I  SGEV+FCI +Y+  CKLGLC DI++YK LIPA SK+ +IDEAFRLL+  +EDGHKPFPSL
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSL

Q9FIT7 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial4.2e-1032.17Show/hide
Query:  MKTQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDE
        MK +N+ ISP T   +++  G+ ++G L+ A N+V++M   G  P++  + +LI     +      + +  E+ + G+ PDI  Y  LI   SK  R+DE
Subjt:  MKTQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDE

Query:  AFRLLHCSIEDGHKP
        A   L   +E+G KP
Subjt:  AFRLLHCSIEDGHKP

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial4.6e-0933.64Show/hide
Query:  SPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCS
        +P  IS  I   GL  +G +E A    ++M   GS PDI TFNSLI  +C +G ++  + ++ ++   G+ PD  ++  L+    K   + +A  LL   
Subjt:  SPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCS

Query:  IEDGHKP
        IEDG  P
Subjt:  IEDGHKP

Q9SFV9 Pentatricopeptide repeat-containing protein At3g07290, mitochondrial2.1e-0927.35Show/hide
Query:  TQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAF
        ++ +  +P ++S+ I  +GL   G LE A  +  +M ++G  P   T+  LI  +C+ G +D   N++ E+   G  P++++Y +LI    +  +I+EA 
Subjt:  TQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAF

Query:  RLLHCSIEDGHKPFPSL
         +    ++D  + FPS+
Subjt:  RLLHCSIEDGHKPFPSL

Q9ZVX5 Pentatricopeptide repeat-containing protein At2g168804.6e-0931.4Show/hide
Query:  KTQNLKISPGTISFIIEE--YGLLNAGY-----LESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSK
        +  NL  S     FI++E  YG L  G+     +E A  M  +M K    P + TFNSLI  +C+ G+ +  +  + E+ + GL PD +++  +I    K
Subjt:  KTQNLKISPGTISFIIEE--YGLLNAGY-----LESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSK

Query:  VCRIDEAFRLLHCSIEDGHKP
          R+++AF   + SI+   KP
Subjt:  VCRIDEAFRLLHCSIEDGHKP

Arabidopsis top hitse value%identityAlignment
AT2G16880.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-1031.4Show/hide
Query:  KTQNLKISPGTISFIIEE--YGLLNAGY-----LESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSK
        +  NL  S     FI++E  YG L  G+     +E A  M  +M K    P + TFNSLI  +C+ G+ +  +  + E+ + GL PD +++  +I    K
Subjt:  KTQNLKISPGTISFIIEE--YGLLNAGY-----LESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSK

Query:  VCRIDEAFRLLHCSIEDGHKP
          R+++AF   + SI+   KP
Subjt:  VCRIDEAFRLLHCSIEDGHKP

AT3G07290.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-1027.35Show/hide
Query:  TQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAF
        ++ +  +P ++S+ I  +GL   G LE A  +  +M ++G  P   T+  LI  +C+ G +D   N++ E+   G  P++++Y +LI    +  +I+EA 
Subjt:  TQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAF

Query:  RLLHCSIEDGHKPFPSL
         +    ++D  + FPS+
Subjt:  RLLHCSIEDGHKPFPSL

AT5G18390.1 Pentatricopeptide repeat (PPR) superfamily protein5.9e-3671.72Show/hide
Query:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSL
        GLLNAGYLESAK MV KMTK G VPDI TFN LI  I  SGEV+FCI +Y+  CKLGLC DI++YK LIPA SK+ +IDEAFRLL+  +EDGHKPFPSL
Subjt:  GLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIEDGHKPFPSL

AT5G61990.1 Pentatricopeptide repeat (PPR) superfamily protein3.0e-1132.17Show/hide
Query:  MKTQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDE
        MK +N+ ISP T   +++  G+ ++G L+ A N+V++M   G  P++  + +LI     +      + +  E+ + G+ PDI  Y  LI   SK  R+DE
Subjt:  MKTQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDE

Query:  AFRLLHCSIEDGHKP
        A   L   +E+G KP
Subjt:  AFRLLHCSIEDGHKP

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-1033.64Show/hide
Query:  SPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCS
        +P  IS  I   GL  +G +E A    ++M   GS PDI TFNSLI  +C +G ++  + ++ ++   G+ PD  ++  L+    K   + +A  LL   
Subjt:  SPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCS

Query:  IEDGHKP
        IEDG  P
Subjt:  IEDGHKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGACGCAGAATCTCAAAATTTCGCCGGGAACGATATCCTTCATCATCGAAGAGTATGGATTGTTGAATGCGGGGTATTTAGAATCTGCCAAGAATATGGTTAGGAA
AATGACGAAAGAAGGGTCTGTGCCTGATATAGGGACTTTTAATTCTTTGATTACTGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATCAATATTTATCATGAGGTGT
GCAAGTTGGGGCTTTGCCCTGATATAAATTCTTACAAGATTTTGATTCCAGCAACTTCAAAAGTTTGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTCTATTGAG
GATGGACATAAACCGTTTCCAAGTCTCGCCGGCGACAGAGAAGAAGAGGGAGAGAGAGAAGAGGGAGAAGGAGAAGAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGACGCAGAATCTCAAAATTTCGCCGGGAACGATATCCTTCATCATCGAAGAGTATGGATTGTTGAATGCGGGGTATTTAGAATCTGCCAAGAATATGGTTAGGAA
AATGACGAAAGAAGGGTCTGTGCCTGATATAGGGACTTTTAATTCTTTGATTACTGTTATATGTAACTCTGGAGAAGTTGATTTTTGCATCAATATTTATCATGAGGTGT
GCAAGTTGGGGCTTTGCCCTGATATAAATTCTTACAAGATTTTGATTCCAGCAACTTCAAAAGTTTGTAGGATTGATGAAGCATTCAGGCTTTTGCATTGCTCTATTGAG
GATGGACATAAACCGTTTCCAAGTCTCGCCGGCGACAGAGAAGAAGAGGGAGAGAGAGAAGAGGGAGAAGGAGAAGAGAAGTGA
Protein sequenceShow/hide protein sequence
MKTQNLKISPGTISFIIEEYGLLNAGYLESAKNMVRKMTKEGSVPDIGTFNSLITVICNSGEVDFCINIYHEVCKLGLCPDINSYKILIPATSKVCRIDEAFRLLHCSIE
DGHKPFPSLAGDREEEGEREEGEGEEK