CuGenDBv2

Gene ID	Lag0024175
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	dehydration-responsive element-binding protein 3-like
Genome location	chr10:978740..979099
RNA-Seq Expression	Lag0024175
Synteny	Lag0024175
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR001471 - AP2/ERF domain IPR016177 - DNA-binding domain superfamily IPR036955 - AP2/ERF domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6585388.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-27

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL            D  S   D+LTEI+QLP+LG
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG

KAG7020305.1 Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-27

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL            D  S   D+LTEI+QLP+LG
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG

XP_023002497.1 dehydration-responsive element-binding protein 3-like [Cucurbita maxima]

9.8e-29

70.71

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD--------LDDHHSHVDDDLTEIIQLPTLG
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAA+AAHMHNL           D  S   D+LTEI+QLPTLG
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD--------LDDHHSHVDDDLTEIIQLPTLG

XP_023536694.1 dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo]

1.4e-27

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL            D  S   D+LTEI+QLP+LG
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG

XP_038885669.1 ethylene-responsive transcription factor TINY-like [Benincasa hispida]

1.7e-28

67.65

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHH-----------SHVDDDLTEIIQLPT
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAAKAAHMHNL  + +H           S   D+LTEI++LP+
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHH-----------SHVDDDLTEIIQLPT

Query:  LG
        LG
Subjt:  LG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPS6 DREB-like protein

1.5e-27

67.33

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTL
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAAKAAHMHNL    + ++H+      S   D+L+EI++LP L
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTL

Query:  G
        G
Subjt:  G

A0A5A7VBN9 Ethylene-responsive transcription factor TINY-like

1.5e-27

67.33

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTL
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAAKAAHMHNL    + ++H+      S   D+L+EI++LP L
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTL

Query:  G
        G
Subjt:  G

A0A6J1GJB4 dehydration-responsive element-binding protein 3-like

6.8e-28

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRD+QAAA +AAHMHNL            D  S   D+LTEI+QLP+LG
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD---------LDDHHSHVDDDLTEIIQLPTLG

A0A6J1KJP2 dehydration-responsive element-binding protein 3-like

4.7e-29

70.71

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD--------LDDHHSHVDDDLTEIIQLPTLG
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAA+AAHMHNL           D  S   D+LTEI+QLPTLG
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLD--------LDDHHSHVDDDLTEIIQLPTLG

Q75UJ6 DREB-like protein

1.5e-27

67.33

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTL
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL+HLLPRPVSLAPRDVQAAAAKAAHMHNL    + ++H+      S   D+L+EI++LP L
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNL----DLDDHH------SHVDDDLTEIIQLPTL

Query:  G
        G
Subjt:  G

SwissProt top hits

e value

%identity

Alignment

Q39127 Ethylene-responsive transcription factor TINY

3.0e-20

72.31

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL    PRP SL+PRD+Q AA KAAHM
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM

Q52QU1 Ethylene-responsive transcription factor ERF042

8.6e-20

61.9

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEI
        R ++ +WLGTFPT EMAARAHDVAA SIKGSSA LNFP+L   LPRPVSL+ +D+QAAAA+AA M   D      H+ DD T +
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEI

Q9LYD3 Dehydration-responsive element-binding protein 3

4.6e-21

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPCSSSI
        R ++ +WLGTFPTPEMAARAHDVAA SIKG++A LNFP+L    PRPVSL+PRD+Q AA KAAHM         +     L+    L +L   +  S + 
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPCSSSI

Query:  VEDLSVLV
         E+L  +V
Subjt:  VEDLSVLV

Q9M080 Ethylene-responsive transcription factor ERF043

5.1e-20

45.07

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDD----------------------------
        R ++ +WLGTFPT EMA RAHDVAA SIKG+SA LNFP+L  LLPRPVSL+PRDV+AAA KAA M   D D                             
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDD----------------------------

Query:  -------------HHSHVDDDLTEIIQLPTLGFRLPCSSSIV
                       S V DDL EI++LP+LG  L  S+  V
Subjt:  -------------HHSHVDDDLTEIIQLPTLGFRLPCSSSIV

Q9M210 Ethylene-responsive transcription factor ERF035

4.7e-18

68.25

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAA
        R ++ +WLGT+PT EMAARAHDVAA +IKG+S  LNFP+L  LLPRPVS +P+D+QAAA KAA
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAA

Arabidopsis top hits

e value

%identity

Alignment

AT2G25820.1 Integrase-type DNA-binding superfamily protein

6.1e-21

61.9

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEI
        R ++ +WLGTFPT EMAARAHDVAA SIKGSSA LNFP+L   LPRPVSL+ +D+QAAAA+AA M   D      H+ DD T +
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEI

AT3G60490.1 Integrase-type DNA-binding superfamily protein

3.4e-19

68.25

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAA
        R ++ +WLGT+PT EMAARAHDVAA +IKG+S  LNFP+L  LLPRPVS +P+D+QAAA KAA
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAA

AT4G32800.1 Integrase-type DNA-binding superfamily protein

3.6e-21

45.07

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDD----------------------------
        R ++ +WLGTFPT EMA RAHDVAA SIKG+SA LNFP+L  LLPRPVSL+PRDV+AAA KAA M   D D                             
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDD----------------------------

Query:  -------------HHSHVDDDLTEIIQLPTLGFRLPCSSSIV
                       S V DDL EI++LP+LG  L  S+  V
Subjt:  -------------HHSHVDDDLTEIIQLPTLGFRLPCSSSIV

AT5G11590.1 Integrase-type DNA-binding superfamily protein

3.3e-22

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPCSSSI
        R ++ +WLGTFPTPEMAARAHDVAA SIKG++A LNFP+L    PRPVSL+PRD+Q AA KAAHM         +     L+    L +L   +  S + 
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPCSSSI

Query:  VEDLSVLV
         E+L  +V
Subjt:  VEDLSVLV

AT5G25810.1 Integrase-type DNA-binding superfamily protein

2.1e-21

72.31

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Query:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM
        R ++ +WLGTFP+PEMAARAHDVAA SIKG+SA LNFPDL    PRP SL+PRD+Q AA KAAHM
Subjt:  RVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHM

Sequences

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CDS sequence

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ATGAAGGAGATGACCATTTTATATACAGATCGAAGGGTGGAAGCCGAAATGTGGTTAGGCACTTTCCCCACCCCGGAAATGGCCGCCCGTGCCCACGACGTCGCCGCCTT
CAGCATCAAAGGCTCCTCCGCCACCCTCAATTTCCCCGACCTCCTCCACCTCCTCCCCCGCCCCGTCTCCCTCGCCCCTCGCGACGTCCAAGCCGCCGCCGCCAAGGCCG
CCCACATGCACAACCTCGACCTCGACGACCACCACTCCCACGTCGACGACGACCTCACCGAGATCATCCAACTCCCCACCCTCGGCTTCCGATTGCCTTGTTCCTCGTCA
ATCGTGGAGGATTTGTCTGTATTGGTGTAA

mRNA sequence

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Protein sequence

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MKEMTILYTDRRVEAEMWLGTFPTPEMAARAHDVAAFSIKGSSATLNFPDLLHLLPRPVSLAPRDVQAAAAKAAHMHNLDLDDHHSHVDDDLTEIIQLPTLGFRLPCSSS
IVEDLSVLV

Lag0024175 (gene) of Sponge gourd (AG-4) v1 genome