; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024201 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024201
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr10:1168655..1170327
RNA-Seq ExpressionLag0024201
SyntenyLag0024201
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN72731.1 hypothetical protein VITISV_037853 [Vitis vinifera]9.7e-1635.9Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQ
        M+KL+ +K  LK WN  +FG + + K    ++I+ +D+ E    LS     +R  +                 KVL  RL+ V  + +  TQ AF++ RQ
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQ

Query:  IIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK
        I+D IL+  EIV+E   + ++G + K+DFEKAYD   W FL+ ++E+KGF ++WRK
Subjt:  IIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK

PRQ36601.1 putative RNA-directed DNA polymerase [Rosa chinensis]1.1e-1454.22Show/hide
Query:  KVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK
        KVL  RL+ V  D ++  Q AFI+GRQI+D +LV  E+VDE    KK+G + K+DFEKAYD  +W FL+  ME KGF  RWRK
Subjt:  KVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK

RVW17381.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]3.3e-1632.46Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKE-----------------IVVPE-----------
        M+KL+ +K  LK WNI  FG++ + K  I   +  +D +E    L+   + ER   +  L ++  KE                 I V +           
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKE-----------------IVVPE-----------

Query:  --------KKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR
                K VL  RL++V  + +  +Q AF+EGRQI+D +L+  E+VDE   + ++G + K+DFEKAYD  DWGFL+ ++++KGF  +WR
Subjt:  --------KKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR

RVW99757.1 hypothetical protein CK203_029148 [Vitis vinifera]5.7e-1636.78Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEI------------KGKEIVVPE-------KKVLGERLK
        M+KL+ +K  LK WN +SFG + + K SI   I+ +D +E    LS +   +R   K  L E+             G   V  E        KVL  RL+
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEI------------KGKEIVVPE-------KKVLGERLK

Query:  RVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR
         V  + +  TQ A ++GRQI+D +L+  EIVDE   + ++G + K+DFEKAYD  D  FL+ ++++KGF  RWR
Subjt:  RVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR

RVX16479.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.7e-1532.12Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKER------------------------------KSLKSSLMEIKGKEIVV
        M+KL+ +K  LK WN  +FG + + K +I ++I+ +D+ E    LS   + +R                              +S+   ++    K    
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKER------------------------------KSLKSSLMEIKGKEIVV

Query:  P-------EKKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK
        P       E KVL  RL+ V  + +  TQ AF++GRQI+D +L+  EIVDE   + ++G + K+DFEKAYD   W FL+ ++E+KGF ++WRK
Subjt:  P-------EKKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK

TrEMBL top hitse value%identityAlignment
A0A438C2D1 LINE-1 retrotransposable element ORF2 protein1.6e-1632.46Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKE-----------------IVVPE-----------
        M+KL+ +K  LK WNI  FG++ + K  I   +  +D +E    L+   + ER   +  L ++  KE                 I V +           
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKE-----------------IVVPE-----------

Query:  --------KKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR
                K VL  RL++V  + +  +Q AF+EGRQI+D +L+  E+VDE   + ++G + K+DFEKAYD  DWGFL+ ++++KGF  +WR
Subjt:  --------KKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR

A0A438ISR5 Reverse transcriptase domain-containing protein2.8e-1636.78Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEI------------KGKEIVVPE-------KKVLGERLK
        M+KL+ +K  LK WN +SFG + + K SI   I+ +D +E    LS +   +R   K  L E+             G   V  E        KVL  RL+
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEI------------KGKEIVVPE-------KKVLGERLK

Query:  RVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR
         V  + +  TQ A ++GRQI+D +L+  EIVDE   + ++G + K+DFEKAYD  D  FL+ ++++KGF  RWR
Subjt:  RVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWR

A0A803P8A0 Uncharacterized protein1.6e-1640.14Show/hide
Query:  KSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERK--SLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDE
        ++F +  +I+ SI +    L    + K L+  ++K+ +  SL +S+ +I  K +    + VLGE +        +ETQ AF+EGRQI+D +L+  E V++
Subjt:  KSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERK--SLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDE

Query:  YLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK
        Y S  KKG+++K+DFEKAYDR DWGFL+ ++ +KGF  RWRK
Subjt:  YLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK

A0A803QEA6 Uncharacterized protein3.6e-1643.22Show/hide
Query:  VGKTLSDQEIKERK--SLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDW
        + K L+  ++K+ +  SL +S+ +I  K +    + VLGE +        +ETQ AF+EGRQI+D +L+  E V++Y S  +KG+++K+DFEKAYDR DW
Subjt:  VGKTLSDQEIKERK--SLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDW

Query:  GFLEAIMEQKGFITRWRK
        GFL+ ++ +KGF  RWRK
Subjt:  GFLEAIMEQKGFITRWRK

A5BV26 Reverse transcriptase domain-containing protein4.7e-1635.9Show/hide
Query:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQ
        M+KL+ +K  LK WN  +FG + + K    ++I+ +D+ E    LS     +R  +                 KVL  RL+ V  + +  TQ AF++ RQ
Subjt:  MKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKEIVVPEKKVLGERLKRVSLDIMTETQLAFIEGRQ

Query:  IIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK
        I+D IL+  EIV+E   + ++G + K+DFEKAYD   W FL+ ++E+KGF ++WRK
Subjt:  IIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases2.0e-0637.65Show/hide
Query:  ERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKG----YIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRKKV
        ERLK +  +++   Q +FI GR   D I+ V E V  +   +KKG     ++KLD EKAYDR  W +LE  +   GF   W  ++
Subjt:  ERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKG----YIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRKKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATTGATCGTAAATCGTTCAACTTTTGGGAGAGTGGGTGTGGTGGTGGAGGAGCTCAAAGTAGCAACAGTGGGGAGTCGAACTTGAGACAGGATATGAAAAAGTT
GGAGAAATTGAAAGGTAGTCTCAAAGCTTGGAATATCAAGTCTTTTGGGAATATCACACAAATTAAACTATCCATTCAAGAGCAGATTTCTGCTTTAGATAGTTTGGAAG
TTGGAAAGACTCTAAGTGACCAAGAGATCAAGGAAAGAAAATCCCTTAAATCTTCTCTCATGGAGATTAAAGGAAAAGAGATTGTGGTTCCAGAAAAGAAAGTTCTTGGA
GAAAGACTCAAGAGAGTGTCGCTCGACATTATGACCGAGACTCAATTAGCCTTCATTGAGGGAAGACAAATAATAGATGTCATCCTCGTGGTGGCCGAAATAGTTGATGA
ATATTTGAGCAACAAAAAGAAAGGATATATCATTAAGCTTGATTTTGAGAAAGCCTATGACAGAGATGATTGGGGTTTCTTAGAGGCAATTATGGAGCAAAAAGGGTTTA
TCACAAGATGGAGAAAGAAAGTAGATCCAGGGATGCCTTTCCATAGCAAATTTCTCTATCATGATCAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTATTGATCGTAAATCGTTCAACTTTTGGGAGAGTGGGTGTGGTGGTGGAGGAGCTCAAAGTAGCAACAGTGGGGAGTCGAACTTGAGACAGGATATGAAAAAGTT
GGAGAAATTGAAAGGTAGTCTCAAAGCTTGGAATATCAAGTCTTTTGGGAATATCACACAAATTAAACTATCCATTCAAGAGCAGATTTCTGCTTTAGATAGTTTGGAAG
TTGGAAAGACTCTAAGTGACCAAGAGATCAAGGAAAGAAAATCCCTTAAATCTTCTCTCATGGAGATTAAAGGAAAAGAGATTGTGGTTCCAGAAAAGAAAGTTCTTGGA
GAAAGACTCAAGAGAGTGTCGCTCGACATTATGACCGAGACTCAATTAGCCTTCATTGAGGGAAGACAAATAATAGATGTCATCCTCGTGGTGGCCGAAATAGTTGATGA
ATATTTGAGCAACAAAAAGAAAGGATATATCATTAAGCTTGATTTTGAGAAAGCCTATGACAGAGATGATTGGGGTTTCTTAGAGGCAATTATGGAGCAAAAAGGGTTTA
TCACAAGATGGAGAAAGAAAGTAGATCCAGGGATGCCTTTCCATAGCAAATTTCTCTATCATGATCAAGGATAG
Protein sequenceShow/hide protein sequence
MFIDRKSFNFWESGCGGGGAQSSNSGESNLRQDMKKLEKLKGSLKAWNIKSFGNITQIKLSIQEQISALDSLEVGKTLSDQEIKERKSLKSSLMEIKGKEIVVPEKKVLG
ERLKRVSLDIMTETQLAFIEGRQIIDVILVVAEIVDEYLSNKKKGYIIKLDFEKAYDRDDWGFLEAIMEQKGFITRWRKKVDPGMPFHSKFLYHDQG