| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032774.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa] | 7.3e-44 | 29.25 | Show/hide |
Query: IFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNLKANP-NKGK
++ RFR + G+ CARFL +Q+ +V+E+ ++F+ELSAPLP + ++++E TF NGLDP ++ EV S V L ++AAQ VE+K K P + K
Subjt: IFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNLKANP-NKGK
Query: STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQH-RETPYKLTDT-KLKSKKEMGLFIDAIKKIMRP-------LKIISAAKKARVIFKIDFEKVYD
T+P KP+PK + ++ +TL PY+ K + +K + +D+ I+RP L I+ K F +D+
Subjt: STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQH-RETPYKLTDT-KLKSKKEMGLFIDAIKKIMRP-------LKIISAAKKARVIFKIDFEKVYD
Query: HVDWDYIDMVLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGVFKIKLGEFRSFPNNQRSTLGKVNLWPTQESRQNPESNAMLNTTR-HCASKVV
R+++ V D F I + + N S K++L + E + R H
Subjt: HVDWDYIDMVLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGVFKIKLGEFRSFPNNQRSTLGKVNLWPTQESRQNPESNAMLNTTR-HCASKVV
Query: NVEPLSLASRCSKTASAGIPASQQWPNNSTRSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQE
++P L TN TFQ+LMN+VF P+LR+ +LVFFD IL+Y+ D +T+L HL +VF +LR+++LFAN+KKC F +E
Subjt: NVEPLSLASRCSKTASAGIPASQQWPNNSTRSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQE
Query: RIAYLGHWIFANGVSGVAILPLFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMT-----IVMNN
RI YLGHW GV QE+I + W V + +T V N
Subjt: RIAYLGHWIFANGVSGVAILPLFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMT-----IVMNN
Query: GKIATPDTIVEE-----------------RRFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
G IATP T + + ++ + LPVLALPDF QPF IETDASG GLG VL+Q +RP+A+FSQ + +S E
Subjt: GKIATPDTIVEE-----------------RRFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
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| KAA0033837.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-45 | 24.76 | Show/hide |
Query: VMLDEAEEEEEEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTET-----VPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQW
V+ + + +E ++ + K E + R ++ + + + G NK KK E PD WLFRA +YF I +LS+ EK+ V+A+SF L W +
Subjt: VMLDEAEEEEEEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTET-----VPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQW
Query: AKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVED
+ K+ F +L R+ RFR ++G+IC +FL RQ++TV+E+R F++L APL L + ++E TF NGL P ++ EV P LA ++ Q VE+
Subjt: AKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVED
Query: KNLARNLKANPN---KGK----STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQHRE--TPYKLTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAA
+ + RN +AN N GK +T +T + + + K PI+++T +SS ++R+ T +L D + +++KE GL +K K +
Subjt: KNLARNLKANPN---KGK----STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQHRE--TPYKLTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAA
Query: KKARVIFKIDFEKVYDHVDWDYIDM--VLAY----------KAPTLQKWRSVSVGHVSDTDTPRHRKIFVSG----------------------------
++ R+ ++ ++ ++ ++ + ++ + Y ++P + + V H+ +T + I SG
Subjt: KKARVIFKIDFEKVYDHVDWDYIDM--VLAY----------KAPTLQKWRSVSVGHVSDTDTPRHRKIFVSG----------------------------
Query: -------------------------HSGVFKIKLGEFRSFPNNQRSTLGKVNL-------WPTQ-------------ESRQNP-----------------
+G+ + + + S++ V WP Q + NP
Subjt: -------------------------HSGVFKIKLGEFRSFPNNQRSTLGKVNL-------WPTQ-------------ESRQNP-----------------
Query: -------ESNAMLNTTRHCASKVVNVE------------------------PLSLASR-----CSKTASAGIP----------ASQQWPNNSTRS-----
ES + +T +S V+ V+ P+ + C + + I A + + R+
Subjt: -------ESNAMLNTTRHCASKVVNVE------------------------PLSLASR-----CSKTASAGIP----------ASQQWPNNSTRS-----
Query: ---------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLF
TN TFQ+LMN +FKPFLR+ +LVFFDDIL+YS + +L HLG V ++LR + L+AN+KKC FAQ +I YLGH I GV
Subjt: ---------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLF
Query: ITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLG-HWIFTNGVEADGENIQAMTIVMNNGKIATPDTIV----EERRFPIQLPVLA
P+ ++ + N+ +E +LG + V+ G +T ++ G D + + ++ + LPVLA
Subjt: ITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLG-HWIFTNGVEADGENIQAMTIVMNNGKIATPDTIV----EERRFPIQLPVLA
Query: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
LP+F QPF IETDASG G G +L Q RP A++S +
Subjt: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
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| KAA0043539.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.3e-44 | 25.48 | Show/hide |
Query: EEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTETVPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMN
EE K +TK +E R RSK KK ++ + PD WLFRA +YF I LSD EK+ VA ISF L W + + +E GW DL
Subjt: EEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTETVPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMN
Query: RIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLAR---------N
++ RFR +EG++ RFL +Q+ TV+E+R F++L A + L ++E TF NGL+P +K EV + EP LA +K A ++E++ L R +
Subjt: RIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLAR---------N
Query: LKANPNKGKSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHRETPYK-LTDTKLKSKKEMGL--------------------------------
+K +K + T +T P A + P+R+ITL ++ RE P K L+D + ++++E GL
Subjt: LKANPNKGKSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHRETPYK-LTDTKLKSKKEMGL--------------------------------
Query: -------FIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDHVDWDYIDMV-----------LAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGV
F DA + M+ +++ + V+ ID ++ + + + + + + T K + V + + RK+ + G +
Subjt: -------FIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDHVDWDYIDMV-----------LAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGV
Query: FKIK-----------------LGEFRSF------PNNQRSTLGKVNL---------------WPT-------------------------------QESR
K + L E R+ + Q G+V++ WPT Q+
Subjt: FKIK-----------------LGEFRSF------PNNQRSTLGKVNL---------------WPT-------------------------------QESR
Query: QNPESNAMLNTTRHCASKVVNVEPLSL----------------------------------------ASRCSKT-ASAGIPASQQWPNNSTRS-------
+ ML++ C SK P+ L AS SK AG + P + ++
Subjt: QNPESNAMLNTTRHCASKVVNVEPLSL----------------------------------------ASRCSKT-ASAGIPASQQWPNNSTRS-------
Query: -----------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILP
TN +TFQ+LMN+VFKP+LRR +LVFFDDIL+YS M+ ++ HL +V +L++ L+AN +KC FA+ RI+YLGH+I G+
Subjt: -----------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILP
Query: LFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKI---ATPDTIVEERRFPIQLPVLA
P+ ++ NV + + G+ + V+ G +T ++ G A +T + + + PVL
Subjt: LFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKI---ATPDTIVEERRFPIQLPVLA
Query: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
+PDF+ PF IE+DASG GLG VLTQ ++ VA+FS++
Subjt: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
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| KAA0063300.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 7.8e-46 | 25.36 | Show/hide |
Query: PDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLT
PD WLFRA +YF I LSD EK+ VA ISF L W + + +E F+GW+DL ++ RFR + +G++ RFL +Q+ TV+E+R RF++ AP+ L
Subjt: PDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLT
Query: DEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARN----LKANPNKG--KSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHR
++E TF NGL P +K EV ++EPV LA +K A ++E++ + R A +K ++TN+ + N N P+R+ITL ++ R
Subjt: DEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARN----LKANPNKG--KSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHR
Query: ETPYK-LTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAAKKARVIFKIDFEKVYDHVDWDYIDMVLAYKAPTLQKWRS----VSVGHVSDTDTPRHRKIF
E P K LTD + ++++E GL +K + +K+ R++ + + + ++ +Y D K P +Q + +S+ V PR K
Subjt: ETPYK-LTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAAKKARVIFKIDFEKVYDHVDWDYIDMVLAYKAPTLQKWRS----VSVGHVSDTDTPRHRKIF
Query: VSGHSGVFKI---------------KLGEFRSFPNNQRSTLG----------------KVNLW-------------------------------------
V G G ++ KL E P + G KV LW
Subjt: VSGHSGVFKI---------------KLGEFRSFPNNQRSTLG----------------KVNLW-------------------------------------
Query: ---------------------PTQESRQNPESNAMLNTTRH---------------------------------CASKVVNVEPLSLASR--------CS
+E ++ E++ T + VNV P A
Subjt: ---------------------PTQESRQNPESNAMLNTTRH---------------------------------CASKVVNVEPLSLASR--------CS
Query: KTASAGI--PASQQWP----------------------NNST----------------------------------------------------------
+ ++GI P++ + NN T
Subjt: KTASAGI--PASQQWP----------------------NNST----------------------------------------------------------
Query: ---RSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIV
TN +TFQ+LMN+VFKPFLRR +LVFFDDIL+YS M+ + HL +V +LR++ L+AN KC FA+ RI+YLGH+I + G+ + P I V
Subjt: ---RSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIV
Query: --YNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQP
+ +++ LG+ R N ++ G + +T EA E + ++ + LPVLA+PDF+ P
Subjt: --YNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQP
Query: FTIETDASGTGLGVVLTQKQRPVAFFSQ
F IE+DASG G+G VL Q +RPVA+FS+
Subjt: FTIETDASGTGLGVVLTQKQRPVAFFSQ
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| XP_031745419.1 uncharacterized protein LOC116405630 [Cucumis sativus] | 2.4e-47 | 26.51 | Show/hide |
Query: NKLKKTET-----VPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEF
+K KK E V P+ W +RA +F I L + EKV+VA +SF + + W +W+ ++ + W+DL R+F+ F + S+ AR + +Q+ + E+
Subjt: NKLKKTET-----VPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEF
Query: RERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNLKANP----NKGKSTNSTSPNYELAKPNPKVIDATPIRS
++F SAPLP + + ++ F GL+P ++ EV+S P L +K AQ D+N+A L ++ NS+ + K K + ++
Subjt: RERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNLKANP----NKGKSTNSTSPNYELAKPNPKVIDATPIRS
Query: ITLPTSSSPQHRETPYK-LTDTKLKSKKEMGLFIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDH-------------VDWDYIDM------------
+T+P + Q ++ P K L+DT+ +++ + GL +K + K+ ++ ++ E+ DH ++ +++++
Subjt: ITLPTSSSPQHRETPYK-LTDTKLKSKKEMGLFIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDH-------------VDWDYIDM------------
Query: -VLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGVFKIKLGEFRSFPNNQRSTLGKVNL-----WPTQESRQN-----PESNAMLNTTRHCA-SK
V + L+ S+ G + SG K+KL E + LG V+L W P A+ + A K
Subjt: -VLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGVFKIKLGEFRSFPNNQRSTLGKVNL-----WPTQESRQN-----PESNAMLNTTRHCA-SK
Query: VVNVEPL--------SLASRCSKTASAGIPASQQWPNNST------------------------------------------------------------
+NV P + + AG+ + P +S
Subjt: VVNVEPL--------SLASRCSKTASAGIPASQQWPNNST------------------------------------------------------------
Query: -------------------------RSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYL
TN TFQSLMN VFKPFLRRC+LVFF DIL+YS D+ ++ HLGMVF +LRD+ LFAN+ KCV A ++ YL
Subjt: -------------------------RSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYL
Query: GHWIFANGVSGVAILPLFITIVYNTRPDMQTNLT-HLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTI
GH I + GV A ++V RP T L LG+ R + E A L + N + E TI + K+A
Subjt: GHWIFANGVSGVAILPLFITIVYNTRPDMQTNLT-HLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTI
Query: VEERRFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
LPVLALPD+ QPFTIETDASG GLG VL+Q P+AFFSQ + +S E
Subjt: VEERRFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SNK3 Putative retroelement pol polyprotein | 3.5e-44 | 29.25 | Show/hide |
Query: IFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNLKANP-NKGK
++ RFR + G+ CARFL +Q+ +V+E+ ++F+ELSAPLP + ++++E TF NGLDP ++ EV S V L ++AAQ VE+K K P + K
Subjt: IFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNLKANP-NKGK
Query: STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQH-RETPYKLTDT-KLKSKKEMGLFIDAIKKIMRP-------LKIISAAKKARVIFKIDFEKVYD
T+P KP+PK + ++ +TL PY+ K + +K + +D+ I+RP L I+ K F +D+
Subjt: STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQH-RETPYKLTDT-KLKSKKEMGLFIDAIKKIMRP-------LKIISAAKKARVIFKIDFEKVYD
Query: HVDWDYIDMVLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGVFKIKLGEFRSFPNNQRSTLGKVNLWPTQESRQNPESNAMLNTTR-HCASKVV
R+++ V D F I + + N S K++L + E + R H
Subjt: HVDWDYIDMVLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGVFKIKLGEFRSFPNNQRSTLGKVNLWPTQESRQNPESNAMLNTTR-HCASKVV
Query: NVEPLSLASRCSKTASAGIPASQQWPNNSTRSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQE
++P L TN TFQ+LMN+VF P+LR+ +LVFFD IL+Y+ D +T+L HL +VF +LR+++LFAN+KKC F +E
Subjt: NVEPLSLASRCSKTASAGIPASQQWPNNSTRSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQE
Query: RIAYLGHWIFANGVSGVAILPLFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMT-----IVMNN
RI YLGHW GV QE+I + W V + +T V N
Subjt: RIAYLGHWIFANGVSGVAILPLFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMT-----IVMNN
Query: GKIATPDTIVEE-----------------RRFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
G IATP T + + ++ + LPVLALPDF QPF IETDASG GLG VL+Q +RP+A+FSQ + +S E
Subjt: GKIATPDTIVEE-----------------RRFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
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| A0A5A7SX47 Ty3/gypsy retrotransposon protein | 6.4e-46 | 24.76 | Show/hide |
Query: VMLDEAEEEEEEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTET-----VPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQW
V+ + + +E ++ + K E + R ++ + + + G NK KK E PD WLFRA +YF I +LS+ EK+ V+A+SF L W +
Subjt: VMLDEAEEEEEEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTET-----VPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQW
Query: AKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVED
+ K+ F +L R+ RFR ++G+IC +FL RQ++TV+E+R F++L APL L + ++E TF NGL P ++ EV P LA ++ Q VE+
Subjt: AKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVED
Query: KNLARNLKANPN---KGK----STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQHRE--TPYKLTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAA
+ + RN +AN N GK +T +T + + + K PI+++T +SS ++R+ T +L D + +++KE GL +K K +
Subjt: KNLARNLKANPN---KGK----STNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQHRE--TPYKLTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAA
Query: KKARVIFKIDFEKVYDHVDWDYIDM--VLAY----------KAPTLQKWRSVSVGHVSDTDTPRHRKIFVSG----------------------------
++ R+ ++ ++ ++ ++ + ++ + Y ++P + + V H+ +T + I SG
Subjt: KKARVIFKIDFEKVYDHVDWDYIDM--VLAY----------KAPTLQKWRSVSVGHVSDTDTPRHRKIFVSG----------------------------
Query: -------------------------HSGVFKIKLGEFRSFPNNQRSTLGKVNL-------WPTQ-------------ESRQNP-----------------
+G+ + + + S++ V WP Q + NP
Subjt: -------------------------HSGVFKIKLGEFRSFPNNQRSTLGKVNL-------WPTQ-------------ESRQNP-----------------
Query: -------ESNAMLNTTRHCASKVVNVE------------------------PLSLASR-----CSKTASAGIP----------ASQQWPNNSTRS-----
ES + +T +S V+ V+ P+ + C + + I A + + R+
Subjt: -------ESNAMLNTTRHCASKVVNVE------------------------PLSLASR-----CSKTASAGIP----------ASQQWPNNSTRS-----
Query: ---------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLF
TN TFQ+LMN +FKPFLR+ +LVFFDDIL+YS + +L HLG V ++LR + L+AN+KKC FAQ +I YLGH I GV
Subjt: ---------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLF
Query: ITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLG-HWIFTNGVEADGENIQAMTIVMNNGKIATPDTIV----EERRFPIQLPVLA
P+ ++ + N+ +E +LG + V+ G +T ++ G D + + ++ + LPVLA
Subjt: ITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLG-HWIFTNGVEADGENIQAMTIVMNNGKIATPDTIV----EERRFPIQLPVLA
Query: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
LP+F QPF IETDASG G G +L Q RP A++S +
Subjt: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
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| A0A5A7TQU2 Ty3/gypsy retrotransposon protein | 1.6e-44 | 25.48 | Show/hide |
Query: EEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTETVPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMN
EE K +TK +E R RSK KK ++ + PD WLFRA +YF I LSD EK+ VA ISF L W + + +E GW DL
Subjt: EEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWNKLKKTETVPPDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMN
Query: RIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLAR---------N
++ RFR +EG++ RFL +Q+ TV+E+R F++L A + L ++E TF NGL+P +K EV + EP LA +K A ++E++ L R +
Subjt: RIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLAR---------N
Query: LKANPNKGKSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHRETPYK-LTDTKLKSKKEMGL--------------------------------
+K +K + T +T P A + P+R+ITL ++ RE P K L+D + ++++E GL
Subjt: LKANPNKGKSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHRETPYK-LTDTKLKSKKEMGL--------------------------------
Query: -------FIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDHVDWDYIDMV-----------LAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGV
F DA + M+ +++ + V+ ID ++ + + + + + + T K + V + + RK+ + G +
Subjt: -------FIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDHVDWDYIDMV-----------LAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFVSGHSGV
Query: FKIK-----------------LGEFRSF------PNNQRSTLGKVNL---------------WPT-------------------------------QESR
K + L E R+ + Q G+V++ WPT Q+
Subjt: FKIK-----------------LGEFRSF------PNNQRSTLGKVNL---------------WPT-------------------------------QESR
Query: QNPESNAMLNTTRHCASKVVNVEPLSL----------------------------------------ASRCSKT-ASAGIPASQQWPNNSTRS-------
+ ML++ C SK P+ L AS SK AG + P + ++
Subjt: QNPESNAMLNTTRHCASKVVNVEPLSL----------------------------------------ASRCSKT-ASAGIPASQQWPNNSTRS-------
Query: -----------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILP
TN +TFQ+LMN+VFKP+LRR +LVFFDDIL+YS M+ ++ HL +V +L++ L+AN +KC FA+ RI+YLGH+I G+
Subjt: -----------TNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILP
Query: LFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKI---ATPDTIVEERRFPIQLPVLA
P+ ++ NV + + G+ + V+ G +T ++ G A +T + + + PVL
Subjt: LFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKI---ATPDTIVEERRFPIQLPVLA
Query: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
+PDF+ PF IE+DASG GLG VLTQ ++ VA+FS++
Subjt: LPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFSQS
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| A0A5A7V7S9 Ty3/gypsy retrotransposon protein | 3.8e-46 | 25.36 | Show/hide |
Query: PDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLT
PD WLFRA +YF I LSD EK+ VA ISF L W + + +E F+GW+DL ++ RFR + +G++ RFL +Q+ TV+E+R RF++ AP+ L
Subjt: PDDWLFRAAQYFTIKRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLT
Query: DEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARN----LKANPNKG--KSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHR
++E TF NGL P +K EV ++EPV LA +K A ++E++ + R A +K ++TN+ + N N P+R+ITL ++ R
Subjt: DEIMESTFFNGLDPEVKVEVLSFEPVDLAAFIKAAQRVEDKNLARN----LKANPNKG--KSTNSTSPNYELAKPNPKVIDATPIRSITL-PTSSSPQHR
Query: ETPYK-LTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAAKKARVIFKIDFEKVYDHVDWDYIDMVLAYKAPTLQKWRS----VSVGHVSDTDTPRHRKIF
E P K LTD + ++++E GL +K + +K+ R++ + + + ++ +Y D K P +Q + +S+ V PR K
Subjt: ETPYK-LTDTKLKSKKEMGLFIDAIKKIMRPLKI-ISAAKKARVIFKIDFEKVYDHVDWDYIDMVLAYKAPTLQKWRS----VSVGHVSDTDTPRHRKIF
Query: VSGHSGVFKI---------------KLGEFRSFPNNQRSTLG----------------KVNLW-------------------------------------
V G G ++ KL E P + G KV LW
Subjt: VSGHSGVFKI---------------KLGEFRSFPNNQRSTLG----------------KVNLW-------------------------------------
Query: ---------------------PTQESRQNPESNAMLNTTRH---------------------------------CASKVVNVEPLSLASR--------CS
+E ++ E++ T + VNV P A
Subjt: ---------------------PTQESRQNPESNAMLNTTRH---------------------------------CASKVVNVEPLSLASR--------CS
Query: KTASAGI--PASQQWP----------------------NNST----------------------------------------------------------
+ ++GI P++ + NN T
Subjt: KTASAGI--PASQQWP----------------------NNST----------------------------------------------------------
Query: ---RSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIV
TN +TFQ+LMN+VFKPFLRR +LVFFDDIL+YS M+ + HL +V +LR++ L+AN KC FA+ RI+YLGH+I + G+ + P I V
Subjt: ---RSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIV
Query: --YNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQP
+ +++ LG+ R N ++ G + +T EA E + ++ + LPVLA+PDF+ P
Subjt: --YNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQP
Query: FTIETDASGTGLGVVLTQKQRPVAFFSQ
F IE+DASG G+G VL Q +RPVA+FS+
Subjt: FTIETDASGTGLGVVLTQKQRPVAFFSQ
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| A0A5D3BC89 Ty3-gypsy retrotransposon protein | 6.0e-44 | 25.95 | Show/hide |
Query: DGGESCSALSLLDVML------DEAEEEEEEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWN-------KLKKTET-----VPPDDWLFRAAQYFTI
DG E LSL ++ML + +E +E +S K+ + + + + + K+++T+ + N K KK E P+ W++R +F I
Subjt: DGGESCSALSLLDVML------DEAEEEEEEEKSQTKKPDEDEDEARRRRSRSKLKKTKPVGSWN-------KLKKTET-----VPPDDWLFRAAQYFTI
Query: KRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDP
L EKV+VA ++F + + W W+ ++ + W+DL R+FE FR + S+ AR + +QD + ++ ++F SAPLP++ + ++ F GL+P
Subjt: KRLSDEEKVQVAAISFTEAVLQWLQWAKGKEPFQGWKDLMNRIFERFRPMQEGSICARFLVARQDNTVQEFRERFEELSAPLPHLTDEIMESTFFNGLDP
Query: EVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNL------KANPNKGKSTNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQHRETPYK-LTDTKLKSK
++ EV+S P L +K AQ V DKNLA A ++G S+ E K P+ D ++ IT+P + E P K L+D + ++K
Subjt: EVKVEVLSFEPVDLAAFIKAAQRVEDKNLARNL------KANPNKGKSTNSTSPNYELAKPNPKVIDATPIRSITLPTSSSPQHRETPYK-LTDTKLKSK
Query: KEMGLFIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDH-----------VDWDYIDMVLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFV--------
+ GL+ K + + K+ + F I+ E+ + V+ +++ K S G + H++I V
Subjt: KEMGLFIDAIKKIMRPLKIISAAKKARVIFKIDFEKVYDH-----------VDWDYIDMVLAYKAPTLQKWRSVSVGHVSDTDTPRHRKIFV--------
Query: ---------------------------------SGHSGVFKIKLGEFRSFPNNQRSTLGKVNL----------------WPT------QESRQNPESNAM
G ++KL E + LG V+ WP+ E RQ
Subjt: ---------------------------------SGHSGVFKIKLGEFRSFPNNQRSTLGKVNL----------------WPT------QESRQNPESNAM
Query: LNTTRHCASKVV----------------NVE------------------------------------------------------PLSLAS---------
T C+ K + N+E L L S
Subjt: LNTTRHCASKVV----------------NVE------------------------------------------------------PLSLAS---------
Query: -RCSKTASAGIPASQQWPNNSTRSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHW
KTA ++ S N TFQSLMN+VFKPFLRRC+LVFFDDIL+YS D+ + HLGMVF VLRDN L+AN+KKCVFA +I YLGH
Subjt: -RCSKTASAGIPASQQWPNNSTRSTNGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHW
Query: IFANGVSGVAILPLFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEER
I +GV + V P + N R NA F G EA+ ++ + + M
Subjt: IFANGVSGVAILPLFITIVYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEER
Query: RFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFS
+PVLALPD++ PFTIETDASG+GLG VL+Q+ P+AFFS
Subjt: RFPIQLPVLALPDFDQPFTIETDASGTGLGVVLTQKQRPVAFFS
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| SwissProt top hits | e value | %identity | Alignment |
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| O92815 Gag-Pol polyprotein | 1.2e-04 | 22.87 | Show/hide |
Query: FQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIVYNTRPDMQTNL
+QSL FK C ++ DD+LI S D TNL ++ L ++KK Q+ + YLG + G PD + +
Subjt: FQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIVYNTRPDMQTNL
Query: THLGMVFNVLRDNALFANQKKCVFAQERIAYLGHW-----IFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIETDAS
+ + + A + Y HW I + +E + A +++ ++ + + + PVL +PD +PF + T S
Subjt: THLGMVFNVLRDNALFANQKKCVFAQERIAYLGHW-----IFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIETDAS
Query: GTGLGVVLTQKQ----RPVAFFS
VLTQK RP+AF S
Subjt: GTGLGVVLTQKQ----RPVAFFS
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.4e-13 | 26.69 | Show/hide |
Query: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVS-GVAILPLFITIVYNTRP
N TFQ MN + +P L + LV+ DDI+++S + +L LG+VF L L KC F ++ +LGH + +G+ + T+P
Subjt: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVS-GVAILPLFITIVYNTRP
Query: -DMQTNLTHLGMVFNVLRDNALFAN-QKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIET
+++ L G + + A A KC+ +I T E D + ++ + P+L +PDF + FT+ T
Subjt: -DMQTNLTHLGMVFNVLRDNALFAN-QKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIET
Query: DASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
DAS LG VL+Q P+++ S++ H N ST E
Subjt: DASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 7.2e-10 | 25.83 | Show/hide |
Query: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANG-------VSGVAILPLFITI
N + FQ ++ V + + + V+ DD++I+S + ++ H+ V L D + +Q+K F +E + YLG + +G V + P
Subjt: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANG-------VSGVAILPLFITI
Query: VYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPF
VY R + L VF ++D A A + E + H VE + A + N +A+ D I L PDF +PF
Subjt: VYNTRPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPF
Query: TIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
+ TDAS +G+G VL+Q+ RP+ S++ +N +T E
Subjt: TIETDASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 6.3e-14 | 25 | Show/hide |
Query: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGV--SGVAILPLFITIVYNTR
N TFQ MN + +P L + LV+ DDI+I+S + +L + +VF L D L KC F ++ +LGH + +G+ + + + + +
Subjt: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGV--SGVAILPLFITIVYNTR
Query: PDMQTNLTHLGMVFNVLRDNALFAN-QKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIET
+++ L G + + A A C+ + +I + K+ + + + I+ P+L LPDF++ F + T
Subjt: PDMQTNLTHLGMVFNVLRDNALFAN-QKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIET
Query: DASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
DAS LG VL+Q P++F S++ H N S E
Subjt: DASGTGLGVVLTQKQRPVAFFSQSQVVHGKNQSTKE
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 3.0e-08 | 22.78 | Show/hide |
Query: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIVYNTRPD
N FQ +++ + + + + V+ DDI+++S D T+ +L +V L L N +K F ++ +LG+ + A+G+ P + + P
Subjt: NGLTTFQSLMNRVFKPFLRRCLLVFFDDILIYSPDMQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFANGVSGVAILPLFITIVYNTRPD
Query: MQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIETDAS
V + R + + +K + ++A T G+ A+ ++ Q+ + + + A + + + +LA P F +PF + TDAS
Subjt: MQTNLTHLGMVFNVLRDNALFANQKKCVFAQERIAYLGHWIFTNGVEADGENIQAMTIVMNNGKIATPDTIVEERRFPIQLPVLALPDFDQPFTIETDAS
Query: GTGLGVVLTQ----KQRPVAFFSQSQVVHGKNQSTKE
+G VL+Q + RP+A+ S+S +N +T E
Subjt: GTGLGVVLTQ----KQRPVAFFSQSQVVHGKNQSTKE
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