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Lag0024206 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024206
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr10:1215896..1216342
RNA-Seq ExpressionLag0024206
SyntenyLag0024206
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]5.6e-3473.83Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        VN +ALPIVG SK+V LKL  W G+VD VVVRMDD DVVLGMEFL++HKVIP+PL KCMI T NSP VV  SIKQP  +RMI ALQLKKGLNR+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVEGP
        I MVE P
Subjt:  ILMVEGP

XP_022975706.1 uncharacterized protein LOC111475733, partial [Cucurbita maxima]2.4e-3265.71Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        +NS+ALPIVG SK+VP K+ +W G +DLVV RMDD DVVLGMEFLL+HKVIP+PL KC++ TD +P V+P SIKQP ++RMI A+QLK+GL R+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVE
        I ++E
Subjt:  ILMVE

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]6.2e-3367.62Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        VNS+ALPIVG SK VP K+ +W G +DLVVVRMDD DVVLGMEFLL+HKVIP+PL KC++ TD +P V+P SIKQP ++RMI A+QLK+GL R+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVE
        I ++E
Subjt:  ILMVE

XP_023526180.1 uncharacterized protein LOC111789739 [Cucurbita pepo subsp. pepo]1.6e-3368.57Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        VNS+ALPIVG SK VP K+ +W G +DLVVVRMDD DVVLGMEFLL+HKVIP+PL KC++ TD +PIV+P SIKQP ++RMI A+QLK+GL R+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVE
        I ++E
Subjt:  ILMVE

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]6.2e-3367.62Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        VNS+ALPIVG SK VP K+ +W G +DLVVVRMDD DVVLGMEFLL+HKVIP+PL KC++ TD +P V+P SIKQP ++RMI A+QLK+GL R+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVE
        I ++E
Subjt:  ILMVE

TrEMBL top hitse value%identityAlignment
A0A6J1D906 Reverse transcriptase2.7e-3473.83Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        VN +ALPIVG SK+V LKL  W G+VD VVVRMDD DVVLGMEFL++HKVIP+PL KCMI T NSP VV  SIKQP  +RMI ALQLKKGLNR+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVEGP
        I MVE P
Subjt:  ILMVEGP

A0A6J1DK29 uncharacterized protein LOC1110218297.4e-3274.49Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTF
        VNS+ALPIVG SK+V LKL  W G+ D VVVRMDD DVVLGMEFL++HKVIP+PL KCMI T NSP VV  SIKQP  +RMI ALQLKKGLNR+EPTF
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTF

A0A6J1DLQ6 uncharacterized protein LOC1110223202.4e-3060.34Show/hide
Query:  WAKTKLYEQRVNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKG
        W K     + VNS ALPI+G +K+V +KL  W G VD V+VRMDD DVVLG++FLL+HKVIP+PL KC++ T + PIVV  SIKQPS ++MI ALQLKKG
Subjt:  WAKTKLYEQRVNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKG

Query:  LNRDEPTFRAILMVEG
        + +DEPTF AI + EG
Subjt:  LNRDEPTFRAILMVEG

A0A6J1IA31 uncharacterized protein LOC1114714752.4e-3064.76Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        VNS+ALPIVG SK+VP K+ +W G +DLVVVRMD  DV+LGMEFLL+HKVIP+PL KC++ TD +P V+P SIKQP ++RMI A+ LK+GL R+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVE
        I ++E
Subjt:  ILMVE

A0A6J1IEY4 uncharacterized protein LOC1114757331.1e-3265.71Show/hide
Query:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA
        +NS+ALPIVG SK+VP K+ +W G +DLVV RMDD DVVLGMEFLL+HKVIP+PL KC++ TD +P V+P SIKQP ++RMI A+QLK+GL R+EPTF A
Subjt:  VNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSDMRMILALQLKKGLNRDEPTFRA

Query:  ILMVE
        I ++E
Subjt:  ILMVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGTATTCGAAATATGTTCGAGAAGGACAAAGTGTTTTGTTTCGTTGAAGGTTTAAAGCCATGGGCGAAGACGAAGTTATACGAACAGAGAGTTAATTCAAAAGC
CTTACCTATTGTGGGAACTTCCAAAAAGGTTCCATTAAAGTTGAGAGAGTGGAAAGGCAATGTGGACCTCGTAGTGGTTCGCATGGATGATTTGGATGTGGTACTAGGAA
TGGAATTTCTCTTGCAGCATAAGGTGATCCCTTTACCACTCACCAAATGCATGATTTTCACTGATAACAGTCCCATCGTAGTCCCAGTGAGTATCAAGCAACCCAGCGAC
ATGAGAATGATTTTGGCCTTACAGTTAAAGAAAGGCCTTAATCGAGATGAACCTACCTTCAGGGCCATTCTGATGGTCGAAGGACCCTCTATTATGTACAAAAAGCTCTC
GACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGTATTCGAAATATGTTCGAGAAGGACAAAGTGTTTTGTTTCGTTGAAGGTTTAAAGCCATGGGCGAAGACGAAGTTATACGAACAGAGAGTTAATTCAAAAGC
CTTACCTATTGTGGGAACTTCCAAAAAGGTTCCATTAAAGTTGAGAGAGTGGAAAGGCAATGTGGACCTCGTAGTGGTTCGCATGGATGATTTGGATGTGGTACTAGGAA
TGGAATTTCTCTTGCAGCATAAGGTGATCCCTTTACCACTCACCAAATGCATGATTTTCACTGATAACAGTCCCATCGTAGTCCCAGTGAGTATCAAGCAACCCAGCGAC
ATGAGAATGATTTTGGCCTTACAGTTAAAGAAAGGCCTTAATCGAGATGAACCTACCTTCAGGGCCATTCTGATGGTCGAAGGACCCTCTATTATGTACAAAAAGCTCTC
GACATGA
Protein sequenceShow/hide protein sequence
MLGIRNMFEKDKVFCFVEGLKPWAKTKLYEQRVNSKALPIVGTSKKVPLKLREWKGNVDLVVVRMDDLDVVLGMEFLLQHKVIPLPLTKCMIFTDNSPIVVPVSIKQPSD
MRMILALQLKKGLNRDEPTFRAILMVEGPSIMYKKLST