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Lag0024242 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024242
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationchr10:1514712..1515185
RNA-Seq ExpressionLag0024242
SyntenyLag0024242
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]2.2e-2059.34Show/hide
Query:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPY
        + AAE VEEWK+MI+ FC+SSA+ IATVSV I+ +LPN +  +SI +LLCF  V F +M  SIF+  S+ILYCVGG L  ++ FIATAIPY
Subjt:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4668.15Show/hide
Query:  MGWVGNCIRKATACWLWELENEPDGGGGG-------QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIF
        M W  NCI+   A  LWELE+  +GGGGG         AAE VEEWK+MIVAFC+SSA+AIATVSVQIEKKLP ++ F+S+ LLLCFG VAFGKMTKSI 
Subjt:  MGWVGNCIRKATACWLWELENEPDGGGGG-------QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIF

Query:  KRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFLIYLIFWFLMFIIITHKTPSS
        KR S+ILYCVGG L VTALFIA+AIPYA YFQ+I+FLIYLIFW LMF+++ HK+ SS
Subjt:  KRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFLIYLIFWFLMFIIITHKTPSS

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1447.22Show/hide
Query:  TAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFL
        +A E + +W+ M+V FC+ +A+AIATVSVQI+ KL  ++ F+S  L+ CF      K+ K   +R S ILY +GGF  VTA FIA AIPYA +FQ++   
Subjt:  TAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFL

Query:  IYLIFWFL
        +YL+F F+
Subjt:  IYLIFWFL

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]2.9e-1259.15Show/hide
Query:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQIL
        +  AE VEE KEMI+ FCLSSA+ IATVSVQ + KLPN + F+SI +L+CF  V F +M  SIFK  S+IL
Subjt:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQIL

PRQ21579.1 hypothetical protein RchiOBHm_Chr7g0240781 [Rosa chinensis]4.3e-0836.36Show/hide
Query:  WKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPY-APYFQMIVFLIYLIFW
        W  ++  FC +SA+ +A +S QI  +LP ++ F+   ++L F C   G+  +S+F++A+Q+L  V  FL VTA+FI+  IP+ A +F+ +   IY++ W
Subjt:  WKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPY-APYFQMIVFLIYLIFW

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein3.8e-2657.48Show/hide
Query:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVF
        +  AE VEE KEMI+ FCLSSA+ IATVSVQ + KLPN + F+SI +L+CF  V F +M  SIFK  S+ILYC GGFL  T  FIATAIPY  +F +IV 
Subjt:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVF

Query:  LIYLIFW--FLMFIIITH--KTPSSSN
        ++Y IF   F+M I ITH   +PSSS+
Subjt:  LIYLIFW--FLMFIIITH--KTPSSSN

A0A0A0LQB6 Uncharacterized protein2.3e-3961.25Show/hide
Query:  WVGNCIRKATACWLWEL-----ENEPDGGGGGQ---TAAETVEEWKEMIVAFCLSSAMAIATVSVQIE--KKLPNLYGFVSIGLLLCFGCVAFGKMTKSI
        WVG+CIRK  AC LWE      E+   GG GG+     AE VEEWKEMIVA C+SSA+ IATVSVQIE  K+LP  + F+SI +LLCFG V F KMTK I
Subjt:  WVGNCIRKATACWLWEL-----ENEPDGGGGGQ---TAAETVEEWKEMIVAFCLSSAMAIATVSVQIE--KKLPNLYGFVSIGLLLCFGCVAFGKMTKSI

Query:  FKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFLIYLIFWFLMFIIIT--HKTPSS
        FK  S+ILYCVGGFL VTA FIATAIP+APYFQ+I+F++YL+F F+  +I T  ++ PSS
Subjt:  FKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFLIYLIFWFLMFIIIT--HKTPSS

A0A0A0LQP5 Uncharacterized protein2.8e-2149.23Show/hide
Query:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPY-APYFQMIV
        +  AETVEE KE I+  C+SSA+ I T SVQI+ KLPN +  +S+ +LLCF  V F +M +S+F+  S+ILYCVG F+  T  FIATAI Y   +F  IV
Subjt:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPY-APYFQMIV

Query:  FLIYLIFW-----FLMFIIITHKTPSSSNN
         ++Y IF      F++FI ITH  PSS ++
Subjt:  FLIYLIFW-----FLMFIIITHKTPSSSNN

A0A0A0LSX4 Uncharacterized protein2.8e-2158.95Show/hide
Query:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYF
        + AAE VEEWK+MI+ FC+SSA+ IATVSV I+ +LPN +  +SI +LLCF  V F +M  SIF+  S+ILYCVGG L  ++ FIATAIPYA  F
Subjt:  QTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYF

A0A7N2R866 Uncharacterized protein1.7e-1042.27Show/hide
Query:  EWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFLIYLI
        EW E+++AFCL+SA+ IA +SVQ+  +LP L+   S+ +LL F  V   K     F RA+Q+L   G F  VTA FIA  IP+  Y +   +++Y I
Subjt:  EWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVTALFIATAIPYAPYFQMIVFLIYLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGGTTGGAAATTGCATTAGAAAGGCAACGGCATGTTGGTTATGGGAACTAGAGAACGAACCAGACGGCGGCGGTGGCGGGCAGACGGCGGCGGAGACGGTGGA
GGAATGGAAGGAGATGATAGTAGCATTCTGCCTGTCGTCGGCGATGGCCATAGCAACAGTGTCGGTTCAGATAGAAAAGAAACTGCCAAATTTGTATGGGTTTGTTTCGA
TTGGTCTGTTGCTGTGTTTTGGGTGCGTGGCTTTTGGGAAGATGACCAAATCCATTTTCAAGAGAGCTTCGCAGATTCTGTACTGCGTGGGTGGGTTTTTGGCAGTGACG
GCTCTGTTCATAGCCACTGCAATTCCATATGCACCATATTTTCAGATGATCGTCTTCCTCATTTACTTGATCTTCTGGTTTTTGATGTTCATCATCATCACTCACAAGAC
CCCTTCTTCTTCCAATAATCCTGATGATCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGGTTGGAAATTGCATTAGAAAGGCAACGGCATGTTGGTTATGGGAACTAGAGAACGAACCAGACGGCGGCGGTGGCGGGCAGACGGCGGCGGAGACGGTGGA
GGAATGGAAGGAGATGATAGTAGCATTCTGCCTGTCGTCGGCGATGGCCATAGCAACAGTGTCGGTTCAGATAGAAAAGAAACTGCCAAATTTGTATGGGTTTGTTTCGA
TTGGTCTGTTGCTGTGTTTTGGGTGCGTGGCTTTTGGGAAGATGACCAAATCCATTTTCAAGAGAGCTTCGCAGATTCTGTACTGCGTGGGTGGGTTTTTGGCAGTGACG
GCTCTGTTCATAGCCACTGCAATTCCATATGCACCATATTTTCAGATGATCGTCTTCCTCATTTACTTGATCTTCTGGTTTTTGATGTTCATCATCATCACTCACAAGAC
CCCTTCTTCTTCCAATAATCCTGATGATCTCTGA
Protein sequenceShow/hide protein sequence
MGWVGNCIRKATACWLWELENEPDGGGGGQTAAETVEEWKEMIVAFCLSSAMAIATVSVQIEKKLPNLYGFVSIGLLLCFGCVAFGKMTKSIFKRASQILYCVGGFLAVT
ALFIATAIPYAPYFQMIVFLIYLIFWFLMFIIITHKTPSSSNNPDDL