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Lag0024247 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024247
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransmembrane protein, putative
Genome locationchr10:1564257..1564583
RNA-Seq ExpressionLag0024247
SyntenyLag0024247
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1212726.1 hypothetical protein CJ030_MR5G009768 [Morella rubra]6.2e-1448.39Show/hide
Query:  MATASSSPLLPDLQQ--------SP--AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDE--TPLQ---NGNCLSFLKRKLQRPCVEDVEF
        MAT SS+  LP+ QQ        SP      AWQSSGSIGPFFAVISVLT+L++LSC  GR+C+RR+ +  TPL+   +  C  + KRK ++    DV+ 
Subjt:  MATASSSPLLPDLQQ--------SP--AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDE--TPLQ---NGNCLSFLKRKLQRPCVEDVEF

Query:  GVK----GMESGDRKFNKDGDLQN
        G K    G ES D K  KDGD+Q+
Subjt:  GVK----GMESGDRKFNKDGDLQN

OVA07645.1 hypothetical protein BVC80_7393g5 [Macleaya cordata]3.4e-1250.51Show/hide
Query:  LPDL--QQSPAV------------GGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPL--QNGNCLSFLKRKLQRPCVE----DVEFGVK
        LPD   QQ PA+            GGAW+SSGSIGPFFAV++VLT+L+VLSC   RICSRR+   PL  + G+C+ +L+RK  R C+     DVE G K
Subjt:  LPDL--QQSPAV------------GGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPL--QNGNCLSFLKRKLQRPCVE----DVEFGVK

TXG51537.1 hypothetical protein EZV62_024061 [Acer yangbiense]7.6e-1246.15Show/hide
Query:  SSSPLLPDLQQSP--------AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRR-SDETPL---QNGNCLSFLKRKLQRPCVEDVEFGVKGMES
        +S+ LLP++QQ P        + GG   S+GSIGPFFAVISVLTL +++SC  GR C  R + ETPL   + G+CL ++KR+ +R    +VE G K M  
Subjt:  SSSPLLPDLQQSP--------AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRR-SDETPL---QNGNCLSFLKRKLQRPCVEDVEFGVKGMES

Query:  GDRK
        G+ K
Subjt:  GDRK

XP_013463985.2 uncharacterized protein LOC25486805 [Medicago truncatula]1.3e-1145.45Show/hide
Query:  MATASSSPLLPDLQQ------SPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQN---GNCLSFLKRKLQRPCVEDVEFGVKGME
        MA+A+SS LL   QQ      S     AW+SSGSIGPFFAVI VLT+L+VLSC+  R+C+RR + TPL++     C  ++KR+ +R    DVE G  G +
Subjt:  MATASSSPLLPDLQQ------SPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQN---GNCLSFLKRKLQRPCVEDVEFGVKGME

Query:  --------SGDRKFNKDGDLQ
                  D K  KDGD+Q
Subjt:  --------SGDRKFNKDGDLQ

XP_022137289.1 uncharacterized protein LOC111008787 [Momordica charantia]5.0e-3271.55Show/hide
Query:  MATASSSPLLPDLQQSPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQNGNCLSFLKRKLQRPCVEDVEFGVKGMESG-------
        MATASSSPLLPD QQ+PA GG  QSSGSIGPFFAVISVLTLLS+LSCF GRICSR S+ETPLQ+ NCL  LK +LQR CV+DVE GVKG++ G       
Subjt:  MATASSSPLLPDLQQSPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQNGNCLSFLKRKLQRPCVEDVEFGVKGMESG-------

Query:  -DRKFNKDGDLQNCSS
         DRKF KD  LQN SS
Subjt:  -DRKFNKDGDLQNCSS

TrEMBL top hitse value%identityAlignment
A0A200QB10 Uncharacterized protein1.6e-1250.51Show/hide
Query:  LPDL--QQSPAV------------GGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPL--QNGNCLSFLKRKLQRPCVE----DVEFGVK
        LPD   QQ PA+            GGAW+SSGSIGPFFAV++VLT+L+VLSC   RICSRR+   PL  + G+C+ +L+RK  R C+     DVE G K
Subjt:  LPDL--QQSPAV------------GGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPL--QNGNCLSFLKRKLQRPCVE----DVEFGVK

A0A2N9HK44 Uncharacterized protein7.4e-1346.77Show/hide
Query:  MATASSSPLLPDLQQSPAVG-----------GAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRR--SDETPLQNGNCLSFLKRKLQRPCVE--DVEF
        MAT SSS  LP  QQ PA G             WQSSGSIGPFFAV+SVL LLS+LSC  G+IC+R   S    ++   CL ++KRK +R C+   DVE 
Subjt:  MATASSSPLLPDLQQSPAVG-----------GAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRR--SDETPLQNGNCLSFLKRKLQRPCVE--DVEF

Query:  GVKGMESGDRKFN----KDGDLQN
        G+K M     + N    KDG++Q+
Subjt:  GVKGMESGDRKFN----KDGDLQN

A0A5C7H3R0 Uncharacterized protein3.7e-1246.15Show/hide
Query:  SSSPLLPDLQQSP--------AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRR-SDETPL---QNGNCLSFLKRKLQRPCVEDVEFGVKGMES
        +S+ LLP++QQ P        + GG   S+GSIGPFFAVISVLTL +++SC  GR C  R + ETPL   + G+CL ++KR+ +R    +VE G K M  
Subjt:  SSSPLLPDLQQSP--------AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRR-SDETPL---QNGNCLSFLKRKLQRPCVEDVEFGVKGMES

Query:  GDRK
        G+ K
Subjt:  GDRK

A0A6A1VLI4 Uncharacterized protein3.0e-1448.39Show/hide
Query:  MATASSSPLLPDLQQ--------SP--AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDE--TPLQ---NGNCLSFLKRKLQRPCVEDVEF
        MAT SS+  LP+ QQ        SP      AWQSSGSIGPFFAVISVLT+L++LSC  GR+C+RR+ +  TPL+   +  C  + KRK ++    DV+ 
Subjt:  MATASSSPLLPDLQQ--------SP--AVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDE--TPLQ---NGNCLSFLKRKLQRPCVEDVEF

Query:  GVK----GMESGDRKFNKDGDLQN
        G K    G ES D K  KDGD+Q+
Subjt:  GVK----GMESGDRKFNKDGDLQN

A0A6J1C6U1 uncharacterized protein LOC1110087872.4e-3271.55Show/hide
Query:  MATASSSPLLPDLQQSPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQNGNCLSFLKRKLQRPCVEDVEFGVKGMESG-------
        MATASSSPLLPD QQ+PA GG  QSSGSIGPFFAVISVLTLLS+LSCF GRICSR S+ETPLQ+ NCL  LK +LQR CV+DVE GVKG++ G       
Subjt:  MATASSSPLLPDLQQSPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQNGNCLSFLKRKLQRPCVEDVEFGVKGMESG-------

Query:  -DRKFNKDGDLQNCSS
         DRKF KD  LQN SS
Subjt:  -DRKFNKDGDLQNCSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74055.1 unknown protein2.1e-1238.35Show/hide
Query:  MATASSSPLLPDLQQSP--AVGG-------------------AWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPL----------QNGNCLS
        MA++SSS  L  +QQ P   +GG                      SS SIGPFFAVISVL +L+VLSCF GR C+R    T L          ++G  L 
Subjt:  MATASSSPLLPDLQQSP--AVGG-------------------AWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPL----------QNGNCLS

Query:  FLKRKLQRPCVEDVEFGVKGMESGDRKFNKDGD
        +L+RK +R    DVE G K  +   ++  KD D
Subjt:  FLKRKLQRPCVEDVEFGVKGMESGDRKFNKDGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCGTCATCGTCGCCATTGTTGCCGGATCTGCAGCAATCGCCGGCGGTCGGCGGAGCTTGGCAGTCCTCCGGTTCGATCGGGCCGTTCTTTGCGGTGATCTC
TGTTTTGACTCTGCTGTCGGTTCTGTCTTGCTTTTTCGGAAGAATTTGCAGTCGCAGATCTGATGAAACGCCATTGCAGAATGGAAATTGTTTGAGCTTTTTGAAGAGGA
AGTTGCAGAGGCCCTGTGTTGAAGACGTTGAGTTCGGTGTAAAAGGAATGGAATCGGGTGATCGAAAGTTTAACAAAGATGGCGATCTTCAAAATTGTTCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGCGTCATCGTCGCCATTGTTGCCGGATCTGCAGCAATCGCCGGCGGTCGGCGGAGCTTGGCAGTCCTCCGGTTCGATCGGGCCGTTCTTTGCGGTGATCTC
TGTTTTGACTCTGCTGTCGGTTCTGTCTTGCTTTTTCGGAAGAATTTGCAGTCGCAGATCTGATGAAACGCCATTGCAGAATGGAAATTGTTTGAGCTTTTTGAAGAGGA
AGTTGCAGAGGCCCTGTGTTGAAGACGTTGAGTTCGGTGTAAAAGGAATGGAATCGGGTGATCGAAAGTTTAACAAAGATGGCGATCTTCAAAATTGTTCTTCTTAG
Protein sequenceShow/hide protein sequence
MATASSSPLLPDLQQSPAVGGAWQSSGSIGPFFAVISVLTLLSVLSCFFGRICSRRSDETPLQNGNCLSFLKRKLQRPCVEDVEFGVKGMESGDRKFNKDGDLQNCSS