CuGenDBv2

Gene ID	Lag0024260
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transcription initiation factor TFIID subunit 2
Genome location	chr10:1663208..1665027
RNA-Seq Expression	Lag0024260
Synteny	Lag0024260
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0019538 - protein metabolic process (biological process) GO:0005669 - transcription factor TFIID complex (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003682 - chromatin binding (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	IPR037813 - Transcription initiation factor TFIID subunit 2 IPR042097 - Aminopeptidase N-like , N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7019959.1 Transcription initiation factor TFIID subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-105

73.36

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GAVVRHQKLCLSIDIDK R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVE+E+SFKA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK GSE+QDQPFLENGVQP+ ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE S+VG+HF++H+AHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

XP_004137463.1 transcription initiation factor TFIID subunit 2 [Cucumis sativus]

4.0e-105

74.09

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GAVVRHQKLCLSIDID  R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVENERSFKA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK+GSEQQDQPFLENGVQ + ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQN+RLVRIDYWVE SEVG+HF N MAHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

XP_022137326.1 transcription initiation factor TFIID subunit 2 [Momordica charantia]

4.3e-107

74.09

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Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GA+V HQKLC+SIDIDK RIYG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQH E+ERSFKA SS SSAAD+AGSIYLSSIE+ELVPNLLINCCKAFK GSEQQDQPFLENG+QP+GED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE SEVG+HFS+HMAHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

XP_022923890.1 transcription initiation factor TFIID subunit 2 [Cucurbita moschata]

6.8e-105

73.36

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Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GAVVRHQKLCLSIDIDK R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVE+E+SFKA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK GSE+QDQPFLENGVQP+ ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE S+VG+HF++H+AHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

XP_023000821.1 transcription initiation factor TFIID subunit 2 [Cucurbita maxima]

6.8e-105

73.36

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDDSKPPD +GAVVRHQKLCLSIDIDK R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVE+E+S+KA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK GSE+QDQPFLENGVQP+ ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE S+VG+HF++H+AHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQC8 Transcription initiation factor TFIID subunit 2

1.9e-105

74.09

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GAVVRHQKLCLSIDID  R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVENERSFKA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK+GSEQQDQPFLENGVQ + ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQN+RLVRIDYWVE SEVG+HF N MAHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

A0A1S3C357 Transcription initiation factor TFIID subunit 2

1.6e-104

72.63

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Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GAVVRHQKLCLSIDID  R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGI+SVSVDGDPTEFEYYPR QHVE+ERSFKA +S SSAADAAGSIY+SSIE+ELVPNLLINCCKAFK+GSEQQDQPFLENGVQP+ ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQN+RLVRIDYWVE SEVG+HF N +AHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

A0A6J1C691 Transcription initiation factor TFIID subunit 2

2.1e-107

74.09

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GA+V HQKLC+SIDIDK RIYG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQH E+ERSFKA SS SSAAD+AGSIYLSSIE+ELVPNLLINCCKAFK GSEQQDQPFLENG+QP+GED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE SEVG+HFS+HMAHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

A0A6J1ED82 Transcription initiation factor TFIID subunit 2

3.3e-105

73.36

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDD+KPPD +GAVVRHQKLCLSIDIDK R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVE+E+SFKA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK GSE+QDQPFLENGVQP+ ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE S+VG+HF++H+AHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

A0A6J1KGW7 Transcription initiation factor TFIID subunit 2

3.3e-105

73.36

Show/hide

Query:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP
        MAKPRKPKNTDDSKPPD +GAVVRHQKLCLSIDIDK R+YG                                                  FTELEIAVP
Subjt:  MAKPRKPKNTDDSKPPD-TGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVP

Query:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED
        DIGIVGLHAENLGIVSVSVDGDPTEFEYYPR QHVE+E+S+KA SS SSAADAAGSIYLSSIE+ELVPNLLINCCKAFK GSE+QDQPFLENGVQP+ ED
Subjt:  DIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGED

Query:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        KQNIRLVRIDYWVE S+VG+HF++H+AHTDNQ RRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNG+LLYQV
Subjt:  KQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

SwissProt top hits

e value

%identity

Alignment

Q24325 Transcription initiation factor TFIID subunit 2

8.0e-08

35.45

Show/hide

Query:  QQDQPFLENG-----VQPSG----EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQ-------------KRRARCWFPCMDDGLQRCKYDLEFTVSQN
        Q   P + NG     V P G    ++ Q +R +RI++ +EN + GVHF    A TD +             +  +R WFPC+D     C + LEFTV +N
Subjt:  QQDQPFLENG-----VQPSG----EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQ-------------KRRARCWFPCMDDGLQRCKYDLEFTVSQN

Query:  LVAVSNGVLL
        + AVS G LL
Subjt:  LVAVSNGVLL

Q32PW3 Transcription initiation factor TFIID subunit 2

3.2e-04

31.4

Show/hide

Query:  DKQNIRLVRIDYWVENSEVGVHF---------SNHMAH--TDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        D+  +  V I++ ++  + G+HF         +   AH  +   +  +R WFPC+D   + C + LEFTV  ++VAVS G L+  V
Subjt:  DKQNIRLVRIDYWVENSEVGVHF---------SNHMAH--TDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

Q6P1X5 Transcription initiation factor TFIID subunit 2

4.1e-04

31.4

Show/hide

Query:  DKQNIRLVRIDYWVENSEVGVHF---------SNHMAH--TDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        D+  +  + I++ ++  + G+HF         +   AH  +   +   R WFPC+D   + C + LEFTV   +VAVSNG L+  V
Subjt:  DKQNIRLVRIDYWVENSEVGVHF---------SNHMAH--TDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

Q8C176 Transcription initiation factor TFIID subunit 2

4.1e-04

31.4

Show/hide

Query:  DKQNIRLVRIDYWVENSEVGVHF---------SNHMAH--TDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        D+  +  + I++ ++  + G+HF         +   AH  +   +   R WFPC+D   + C + LEFTV   +VAVSNG L+  V
Subjt:  DKQNIRLVRIDYWVENSEVGVHF---------SNHMAH--TDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

Q8LPF0 Transcription initiation factor TFIID subunit 2

2.2e-66

50.72

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Query:  MAKPRKPKNTD---DSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIA
        MAK RKPKN +        +TGA V HQKL LSID  K +IYG                                                  +TELE++
Subjt:  MAKPRKPKNTD---DSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIA

Query:  VPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSG
        VPDIGIVGLHAENLGI SV VDG+PT FEYYP HQ+ E E ++ + S  +SAADAA   Y+  ++RE   NLLINCCK  K  SEQ D   LENG Q SG
Subjt:  VPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSG

Query:  EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        E KQN++L+RI+YWVE  E G+HF  ++ HTDNQ RRARCWFPC+DD   RC +DLEFTV  N VAVS G LLYQV
Subjt:  EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

Arabidopsis top hits

e value

%identity

Alignment

AT1G73960.1 TBP-associated factor 2

1.6e-67

50.72

Show/hide

Query:  MAKPRKPKNTD---DSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIA
        MAK RKPKN +        +TGA V HQKL LSID  K +IYG                                                  +TELE++
Subjt:  MAKPRKPKNTD---DSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIA

Query:  VPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSG
        VPDIGIVGLHAENLGI SV VDG+PT FEYYP HQ+ E E ++ + S  +SAADAA   Y+  ++RE   NLLINCCK  K  SEQ D   LENG Q SG
Subjt:  VPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSG

Query:  EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        E KQN++L+RI+YWVE  E G+HF  ++ HTDNQ RRARCWFPC+DD   RC +DLEFTV  N VAVS G LLYQV
Subjt:  EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

AT1G73960.2 TBP-associated factor 2

1.6e-67

50.72

Show/hide

Query:  MAKPRKPKNTD---DSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIA
        MAK RKPKN +        +TGA V HQKL LSID  K +IYG                                                  +TELE++
Subjt:  MAKPRKPKNTD---DSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIA

Query:  VPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSG
        VPDIGIVGLHAENLGI SV VDG+PT FEYYP HQ+ E E ++ + S  +SAADAA   Y+  ++RE   NLLINCCK  K  SEQ D   LENG Q SG
Subjt:  VPDIGIVGLHAENLGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSG

Query:  EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV
        E KQN++L+RI+YWVE  E G+HF  ++ HTDNQ RRARCWFPC+DD   RC +DLEFTV  N VAVS G LLYQV
Subjt:  EDKQNIRLVRIDYWVENSEVGVHFSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAAGCCTCGCAAGCCCAAGAACACCGACGACTCCAAACCACCCGACACCGGAGCTGTAGTTCGTCACCAGAAGCTCTGTCTTTCCATCGACATTGACAAGCATCG
CATTTATGGGTTCGTCTTAGCTCCCTCTAACTTGTTCAATTGTGATCGCTACTATCTCCCCCGTCTTCCCATTTGCGTTCTTTCTCGGTGGAATCTTGGTTTTGTTTCAT
TTCTACTTGTGTTGTATGCTTCGCCAAGTTTTTCCTTTAGGCTTGCGAGGTTCACTGAGCTGGAAATTGCGGTTCCGGATATTGGTATAGTTGGGTTGCACGCGGAGAAT
CTTGGGATTGTGAGTGTTTCAGTGGATGGTGACCCTACTGAATTCGAGTACTATCCGCGGCATCAACATGTGGAAAATGAGAGGAGTTTTAAAGCGGCGTCCTCGCTTAG
CTCTGCTGCAGATGCTGCGGGGTCAATTTATTTATCTTCAATCGAGAGAGAGCTGGTTCCGAATTTGTTGATAAATTGCTGCAAGGCTTTCAAGACCGGAAGTGAGCAGC
AGGACCAACCGTTTCTGGAGAATGGAGTGCAACCTTCGGGCGAGGACAAGCAGAATATAAGGCTGGTTCGTATTGATTACTGGGTGGAGAATTCAGAGGTTGGTGTTCAC
TTCAGTAATCATATGGCTCACACTGACAACCAAAAAAGACGTGCAAGGTGCTGGTTCCCTTGTATGGATGATGGCCTACAACGATGCAAGTATGACCTGGAGTTTACTGT
CTCTCAAAATCTTGTAGCTGTCAGTAATGGAGTTCTGTTGTACCAGGTTGCTGGACAATTGTTGAACGTCCATTAA

mRNA sequence

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Protein sequence

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MAKPRKPKNTDDSKPPDTGAVVRHQKLCLSIDIDKHRIYGFVLAPSNLFNCDRYYLPRLPICVLSRWNLGFVSFLLVLYASPSFSFRLARFTELEIAVPDIGIVGLHAEN
LGIVSVSVDGDPTEFEYYPRHQHVENERSFKAASSLSSAADAAGSIYLSSIERELVPNLLINCCKAFKTGSEQQDQPFLENGVQPSGEDKQNIRLVRIDYWVENSEVGVH
FSNHMAHTDNQKRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGVLLYQVAGQLLNVH

Lag0024260 (gene) of Sponge gourd (AG-4) v1 genome