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Lag0024272 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024272
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS-protein homolog
Genome locationchr10:1776738..1777172
RNA-Seq ExpressionLag0024272
SyntenyLag0024272
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022954425.1 S-protein homolog 74-like [Cucurbita moschata]2.3e-4058.59Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  S L D  S+W+V I+N +KDS+LV HCKSKDDDLGEH+I    KY+W F EN+ QTTL+WCNFSSK GQASG VFWPE   +L+D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHLGSLKTFQLLYPWK
         C+W A+D GI   LG+   ++L+YPWK
Subjt:  NCVWAARDQGIYFHLGSLKTFQLLYPWK

XP_022954427.1 S-protein homolog 74-like [Cucurbita moschata]2.5e-3958.59Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  S L D  S+W+V I+N +KDS+LVAHCKSKDDDLGEH+I    KY+W F EN+ QTTL+WCNFSSK GQA G VFWPE   +L+D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHLGSLKTFQLLYPWK
         C+W A+D GI   LG    ++L+YPWK
Subjt:  NCVWAARDQGIYFHLGSLKTFQLLYPWK

XP_022954429.1 S-protein homolog 74-like [Cucurbita moschata]3.0e-4059.38Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  S L D  S+W+V I+N +KDS+LVAHCKSKDDDLGEH+I    KY+W F EN+ QTTL+WCNFSSK GQASG VFWPE   +L+D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHLGSLKTFQLLYPWK
         C+W A+D GI   LG    ++L+YPWK
Subjt:  NCVWAARDQGIYFHLGSLKTFQLLYPWK

XP_023001658.1 S-protein homolog 74-like [Cucurbita maxima]2.5e-4257.43Show/hide
Query:  MKLLNIFCFIILLALGSN-IIKSCFGQ---SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA
        M+ +N  CFI+LL LGSN ++K CF Q   SK+Q P S WQVTI NHM DS+L+ HCKSKD+DLG H I     Y+  F ENIWQTT FWC+FSSK+GQ 
Subjt:  MKLLNIFCFIILLALGSN-IIKSCFGQ---SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA

Query:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK
        +G+VFWPE  + L+D C   NCVW+A+D GI+   GS+ ++QL YPWK
Subjt:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK

XP_023522257.1 S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]6.1e-4167.83Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  SK Q PLS W+V ILNHMKDS+L+AHCKSK+DDLGEH+I   GKYYW F EN+WQ+TLFWCNFSSKHGQASG VFWP++  +L D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHL
         C+WAARD GI   L
Subjt:  NCVWAARDQGIYFHL

TrEMBL top hitse value%identityAlignment
A0A6J1C659 S-protein homolog1.0e-3358.97Show/hide
Query:  QDPLSSWQVTILNHMKDS-SLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHGNCVWAAR-DQGI
        Q P S WQVTI N++K S +L  HCKSKDDDLGEH+I  RG+Y W F EN WQTTLFWCNF S +G ASG VFWPE   +L   C   NC+W AR DQGI
Subjt:  QDPLSSWQVTILNHMKDS-SLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHGNCVWAAR-DQGI

Query:  YFHLGSLKTFQLLYPWK
        Y      +TF+L Y W+
Subjt:  YFHLGSLKTFQLLYPWK

A0A6J1GQZ0 S-protein homolog1.2e-3958.59Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  S L D  S+W+V I+N +KDS+LVAHCKSKDDDLGEH+I    KY+W F EN+ QTTL+WCNFSSK GQA G VFWPE   +L+D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHLGSLKTFQLLYPWK
         C+W A+D GI   LG    ++L+YPWK
Subjt:  NCVWAARDQGIYFHLGSLKTFQLLYPWK

A0A6J1GSD6 S-protein homolog1.1e-4058.59Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  S L D  S+W+V I+N +KDS+LV HCKSKDDDLGEH+I    KY+W F EN+ QTTL+WCNFSSK GQASG VFWPE   +L+D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHLGSLKTFQLLYPWK
         C+W A+D GI   LG+   ++L+YPWK
Subjt:  NCVWAARDQGIYFHLGSLKTFQLLYPWK

A0A6J1GSZ3 S-protein homolog1.5e-4059.38Show/hide
Query:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG
        II SCF Q  S L D  S+W+V I+N +KDS+LVAHCKSKDDDLGEH+I    KY+W F EN+ QTTL+WCNFSSK GQASG VFWPE   +L+D C   
Subjt:  IIKSCFGQ--SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLTDNCIHG

Query:  NCVWAARDQGIYFHLGSLKTFQLLYPWK
         C+W A+D GI   LG    ++L+YPWK
Subjt:  NCVWAARDQGIYFHLGSLKTFQLLYPWK

A0A6J1KR58 S-protein homolog1.2e-4257.43Show/hide
Query:  MKLLNIFCFIILLALGSN-IIKSCFGQ---SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA
        M+ +N  CFI+LL LGSN ++K CF Q   SK+Q P S WQVTI NHM DS+L+ HCKSKD+DLG H I     Y+  F ENIWQTT FWC+FSSK+GQ 
Subjt:  MKLLNIFCFIILLALGSN-IIKSCFGQ---SKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA

Query:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK
        +G+VFWPE  + L+D C   NCVW+A+D GI+   GS+ ++QL YPWK
Subjt:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 65.2e-1134.53Show/hide
Query:  IFCFIILLAL-GSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPE
        I  FI+L++L G   ++       ++ PL+  +V I N   D  L  HCKS+DDD G HI+   G Y W F  N   +TL++C FS +  Q    VF  +
Subjt:  IFCFIILLAL-GSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPE

Query:  SETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPW
            + D+    NC W A++ GIY +    K   L Y W
Subjt:  SETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPW

F4JLS0 S-protein homolog 19.8e-1834.85Show/hide
Query:  KLLNIFCFIILLALGSNIIKSCFGQSKLQD----PLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA
        + L   CF + L    +++    G +  +D     +S WQVT++N +    +L  HCKSK+DDLGE  +  R ++ WNF EN+  +T FWC  +  +G  
Subjt:  KLLNIFCFIILLALGSNIIKSCFGQSKLQD----PLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA

Query:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIY
        + NVFW   +  L   C   NC+W A+  G+Y
Subjt:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIY

O23020 S-protein homolog 51.5e-1030.97Show/hide
Query:  MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNV
        M+ ++I CF   L  GS       G   L     +  VT+ N +    L  HCKSK DDLG H++  + +Y++ F  N+W++TLF+C+F       S ++
Subjt:  MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNV

Query:  FWPESETFLTDNC
        +  + +  + D+C
Subjt:  FWPESETFLTDNC

Q2HQ46 S-protein homolog 741.7e-1732.37Show/hide
Query:  CFIILLALGSNII-KSCFGQSKLQDPLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPES
        CF ++L    +++ +    +  +   +S WQVT+ N +    +L  HCKSK++DLG+  +    ++ WNF EN+  +TLFWC  S   G  +  VFW   
Subjt:  CFIILLALGSNII-KSCFGQSKLQDPLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPES

Query:  ETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK
        +  L   C   NCVW A++ G+Y    ++    L   WK
Subjt:  ETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK

Q9LW22 S-protein homolog 215.7e-1029.45Show/hide
Query:  MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSS---LVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNF--SSKHGQ
        MK L+IF F++ L + S++    +G+           +T+ N +   +   L  HCKSK++D+G   + +     ++F  N W TT FWCN      + +
Subjt:  MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSS---LVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNF--SSKHGQ

Query:  ASGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLY
          G   +     F  D   +    W ARD GIYFH  SL ++   Y
Subjt:  ASGNVFWPESETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLY

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.1e-1130.97Show/hide
Query:  MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNV
        M+ ++I CF   L  GS       G   L     +  VT+ N +    L  HCKSK DDLG H++  + +Y++ F  N+W++TLF+C+F       S ++
Subjt:  MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNV

Query:  FWPESETFLTDNC
        +  + +  + D+C
Subjt:  FWPESETFLTDNC

AT4G16295.1 S-protein homologue 16.9e-1934.85Show/hide
Query:  KLLNIFCFIILLALGSNIIKSCFGQSKLQD----PLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA
        + L   CF + L    +++    G +  +D     +S WQVT++N +    +L  HCKSK+DDLGE  +  R ++ WNF EN+  +T FWC  +  +G  
Subjt:  KLLNIFCFIILLALGSNIIKSCFGQSKLQD----PLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQA

Query:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIY
        + NVFW   +  L   C   NC+W A+  G+Y
Subjt:  SGNVFWPESETFLTDNCIHGNCVWAARDQGIY

AT4G29035.1 Plant self-incompatibility protein S1 family1.2e-1832.37Show/hide
Query:  CFIILLALGSNII-KSCFGQSKLQDPLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPES
        CF ++L    +++ +    +  +   +S WQVT+ N +    +L  HCKSK++DLG+  +    ++ WNF EN+  +TLFWC  S   G  +  VFW   
Subjt:  CFIILLALGSNII-KSCFGQSKLQDPLSSWQVTILNHM-KDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPES

Query:  ETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK
        +  L   C   NCVW A++ G+Y    ++    L   WK
Subjt:  ETFLTDNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK

AT5G04347.1 Plant self-incompatibility protein S1 family1.3e-1234.4Show/hide
Query:  NIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPE
        N+F F+ILL++    I++ FG S L          + N + +  L   C+SKDD+LG+HI+ V      NFD+N+W+ TLFWCN            F   
Subjt:  NIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPE

Query:  SETFLTDNCIHGNCVWAARDQGIYF
           +  D  I    +W AR+ GIY+
Subjt:  SETFLTDNCIHGNCVWAARDQGIYF

AT5G04350.1 Plant self-incompatibility protein S1 family3.0e-1433.33Show/hide
Query:  NIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLV-AHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWC------NFSSKHGQAS
        N+F F I++ L       C G S     +   +V + N ++ S L+  HC+SKDDDLGEHI+ +   Y + F +NIWQTT F C      NF       +
Subjt:  NIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLV-AHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWC------NFSSKHGQAS

Query:  GNVFWPESETFLTDNCIHGNCVWAARDQGIYF
            W ++        +  +C W  R+ GIYF
Subjt:  GNVFWPESETFLTDNCIHGNCVWAARDQGIYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTCTAAACATCTTTTGTTTCATCATATTGCTTGCTTTAGGATCAAACATTATCAAATCATGTTTTGGACAATCCAAGCTACAAGATCCATTGTCCTCATGGCA
AGTGACCATATTGAATCATATGAAGGATTCAAGTCTGGTGGCTCATTGCAAGTCGAAAGACGACGATTTGGGCGAGCACATAATCGGTGTCAGAGGTAAATACTACTGGA
ATTTTGATGAAAATATTTGGCAAACAACATTGTTTTGGTGTAATTTTAGCAGCAAACATGGACAAGCTTCTGGTAATGTTTTCTGGCCAGAGAGTGAAACATTCCTCACT
GATAATTGTATTCATGGTAACTGTGTTTGGGCTGCTAGAGACCAAGGCATTTACTTTCATCTTGGCTCTCTCAAGACCTTTCAATTATTGTATCCTTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTCTAAACATCTTTTGTTTCATCATATTGCTTGCTTTAGGATCAAACATTATCAAATCATGTTTTGGACAATCCAAGCTACAAGATCCATTGTCCTCATGGCA
AGTGACCATATTGAATCATATGAAGGATTCAAGTCTGGTGGCTCATTGCAAGTCGAAAGACGACGATTTGGGCGAGCACATAATCGGTGTCAGAGGTAAATACTACTGGA
ATTTTGATGAAAATATTTGGCAAACAACATTGTTTTGGTGTAATTTTAGCAGCAAACATGGACAAGCTTCTGGTAATGTTTTCTGGCCAGAGAGTGAAACATTCCTCACT
GATAATTGTATTCATGGTAACTGTGTTTGGGCTGCTAGAGACCAAGGCATTTACTTTCATCTTGGCTCTCTCAAGACCTTTCAATTATTGTATCCTTGGAAATGA
Protein sequenceShow/hide protein sequence
MKLLNIFCFIILLALGSNIIKSCFGQSKLQDPLSSWQVTILNHMKDSSLVAHCKSKDDDLGEHIIGVRGKYYWNFDENIWQTTLFWCNFSSKHGQASGNVFWPESETFLT
DNCIHGNCVWAARDQGIYFHLGSLKTFQLLYPWK