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Lag0024273 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024273
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS-protein homolog
Genome locationchr10:1778114..1778494
RNA-Seq ExpressionLag0024273
SyntenyLag0024273
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022954425.1 S-protein homolog 74-like [Cucurbita moschata]5.5e-4667.97Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  S + D  S WEV I+N++KDSTLV HCKSKDDDLGEHVI  G KY+W F EN+ QTTLYWCNFSSK G+ASGQVFWPEK  WLS+RC+RN
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK
        TCIW A++ GI +RLG F  Y+L+YPWK
Subjt:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK

XP_022954427.1 S-protein homolog 74-like [Cucurbita moschata]1.6e-4567.97Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  S + D  S WEV I+N++KDSTLVAHCKSKDDDLGEHVI  G KY+W F EN+ QTTLYWCNFSSK G+A GQVFWPEK  WLS+RC+RN
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK
        TCIW A++ GI +RLG F  Y+L+YPWK
Subjt:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK

XP_022954429.1 S-protein homolog 74-like [Cucurbita moschata]2.5e-4668.75Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  S + D  S WEV I+N++KDSTLVAHCKSKDDDLGEHVI  G KY+W F EN+ QTTLYWCNFSSK G+ASGQVFWPEK  WLS+RC+RN
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK
        TCIW A++ GI +RLG F  Y+L+YPWK
Subjt:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK

XP_023522257.1 S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]1.3e-4473.91Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  SK Q PLSPWEVAILN+MKDSTL+AHCKSK+DDLGEHVI  GGKYYWMFSEN+WQ+TL+WCNFSSK+G+ASG+VFWP+   WL +RC  N
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRL
        TCIWAA++ GI LRL
Subjt:  TCIWAAQEGGIYLRL

XP_023542206.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]4.2e-4671.93Show/hide
Query:  DPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLR
        D  S WEV I+N++KDSTLVAHCKSK DDLGEHVI  G KYYW F EN+WQTTLYWCNFSSK G+ASGQVFWPEK  WLS+RC+RNTCIW A++ GI +R
Subjt:  DPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLR

Query:  LGYFDYYQLIYPWK
        +G F  Y+L+YPWK
Subjt:  LGYFDYYQLIYPWK

TrEMBL top hitse value%identityAlignment
A0A6J1C659 S-protein homolog4.1e-3157.26Show/hide
Query:  QDPLSPWEVAILNNMKDS-TLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQ-EGGI
        Q P S W+V I N +K S  L  HCKSKDDDLGEHVI   G+Y W F EN WQTTL+WCNF S YG ASG+VFWPEK  WL+ RCD + CIW A+ + GI
Subjt:  QDPLSPWEVAILNNMKDS-TLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQ-EGGI

Query:  YLRLGYFDYYQLIYPWK
        YL       ++L Y W+
Subjt:  YLRLGYFDYYQLIYPWK

A0A6J1GQZ0 S-protein homolog7.7e-4667.97Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  S + D  S WEV I+N++KDSTLVAHCKSKDDDLGEHVI  G KY+W F EN+ QTTLYWCNFSSK G+A GQVFWPEK  WLS+RC+RN
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK
        TCIW A++ GI +RLG F  Y+L+YPWK
Subjt:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK

A0A6J1GSD6 S-protein homolog2.6e-4667.97Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  S + D  S WEV I+N++KDSTLV HCKSKDDDLGEHVI  G KY+W F EN+ QTTLYWCNFSSK G+ASGQVFWPEK  WLS+RC+RN
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK
        TCIW A++ GI +RLG F  Y+L+YPWK
Subjt:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK

A0A6J1GSZ3 S-protein homolog1.2e-4668.75Show/hide
Query:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN
        +I S FAQ  S + D  S WEV I+N++KDSTLVAHCKSKDDDLGEHVI  G KY+W F EN+ QTTLYWCNFSSK G+ASGQVFWPEK  WLS+RC+RN
Subjt:  MIKSGFAQ--SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRN

Query:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK
        TCIW A++ GI +RLG F  Y+L+YPWK
Subjt:  TCIWAAQEGGIYLRLGYFDYYQLIYPWK

A0A6J1KR58 S-protein homolog1.7e-3756.59Show/hide
Query:  MIKSGFAQ---SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDR
        ++K  FAQ   SKVQ P S W+V I N+M DSTL+ HCKSKD+DLG H I  G  Y+  F EN+WQTT +WC+FSSKYG+ +G VFWPE+ S LS+ C+ 
Subjt:  MIKSGFAQ---SKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDR

Query:  NTCIWAAQEGGIYLRLGYFDYYQLIYPWK
        + C+W+AQ+GGI+L  G  + YQL YPWK
Subjt:  NTCIWAAQEGGIYLRLGYFDYYQLIYPWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 68.3e-1339.5Show/hide
Query:  KVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGI
        KV     P    ++ N  D  L  HCKS+DDD G H++  GG Y WMF  N   +TLY+C FS +  K    VF   K    S+RC    C W A+E GI
Subjt:  KVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGI

Query:  YLRLGYFDYYQ---LIYPW
        Y   GY +  +   L Y W
Subjt:  YLRLGYFDYYQ---LIYPW

F4JLQ5 S-protein homolog 22.7e-1131.86Show/hide
Query:  PLSPWEVAILNNMKDS-TLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLR
        P S   V I N++ +  TL+ HCKSKDDDLG   +  G  + + F    +  TLY+C+FS      S  ++   + S   N+C+ + C+W  +  G    
Subjt:  PLSPWEVAILNNMKDS-TLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLR

Query:  LGYFDYYQLIYPW
              + L YPW
Subjt:  LGYFDYYQLIYPW

F4JLS0 S-protein homolog 11.8e-1537.76Show/hide
Query:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL
        +S W+V ++N +    TL  HCKSK+DDLGE  +    ++ W F EN+  +T +WC  +   G  +  VFW +    L +RC    CIW A+  G+YL
Subjt:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL

P0DN92 S-protein homolog 242.5e-0938.64Show/hide
Query:  LNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIY
        + N  D  L  HCKS+DDDLG H++  G  + W F  N   +TLY+C FS   G+    VF   + +    RC    C W A++ GIY
Subjt:  LNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIY

Q2HQ46 S-protein homolog 741.4e-1537.76Show/hide
Query:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL
        +S W+V + N +    TL  HCKSK++DLG+  +    ++ W F EN+  +TL+WC  S   G  + +VFW +    L +RCD   C+W A+  G+YL
Subjt:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family3.6e-1133.33Show/hide
Query:  NMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLRLGYFDYYQLIYP
        N K S L   CKS   D+G+H +  G  Y +   +N W+TTL+WC F       +GQ F  +   +        T  W A+E GIY RL     ++ ++ 
Subjt:  NMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLRLGYFDYYQLIYP

Query:  WK
        WK
Subjt:  WK

AT4G16195.1 Plant self-incompatibility protein S1 family1.9e-1231.86Show/hide
Query:  PLSPWEVAILNNMKDS-TLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLR
        P S   V I N++ +  TL+ HCKSKDDDLG   +  G  + + F    +  TLY+C+FS      S  ++   + S   N+C+ + C+W  +  G    
Subjt:  PLSPWEVAILNNMKDS-TLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYLR

Query:  LGYFDYYQLIYPW
              + L YPW
Subjt:  LGYFDYYQLIYPW

AT4G16295.1 S-protein homologue 11.3e-1637.76Show/hide
Query:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL
        +S W+V ++N +    TL  HCKSK+DDLGE  +    ++ W F EN+  +T +WC  +   G  +  VFW +    L +RC    CIW A+  G+YL
Subjt:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL

AT4G29035.1 Plant self-incompatibility protein S1 family9.7e-1737.76Show/hide
Query:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL
        +S W+V + N +    TL  HCKSK++DLG+  +    ++ W F EN+  +TL+WC  S   G  + +VFW +    L +RCD   C+W A+  G+YL
Subjt:  LSPWEVAILNNM-KDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIYL

AT5G04350.1 Plant self-incompatibility protein S1 family1.9e-1235.48Show/hide
Query:  EVAILNNMKDSTLV-AHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIY
        +V + N ++ S L+  HC+SKDDDLGEH++ +G  Y + F +N+WQTT + C             F   + SW  ++    +C W  +E GIY
Subjt:  EVAILNNMKDSTLV-AHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGTCAGGTTTTGCACAATCCAAGGTACAAGATCCATTGTCCCCATGGGAAGTGGCCATTTTGAATAATATGAAGGATTCAACTCTTGTTGCTCATTGCAAGTC
GAAAGATGACGATTTGGGCGAGCACGTGATCAACGTCGGAGGCAAATACTATTGGATGTTCAGTGAAAATCTTTGGCAAACGACATTGTATTGGTGCAATTTTAGCAGCA
AATATGGGAAAGCTTCTGGCCAGGTTTTCTGGCCAGAAAAGAGAAGCTGGCTTAGTAATCGATGTGATCGTAATACCTGCATTTGGGCTGCTCAAGAGGGTGGGATTTAC
TTGCGTCTTGGTTATTTTGATTACTATCAATTAATATATCCTTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGTCAGGTTTTGCACAATCCAAGGTACAAGATCCATTGTCCCCATGGGAAGTGGCCATTTTGAATAATATGAAGGATTCAACTCTTGTTGCTCATTGCAAGTC
GAAAGATGACGATTTGGGCGAGCACGTGATCAACGTCGGAGGCAAATACTATTGGATGTTCAGTGAAAATCTTTGGCAAACGACATTGTATTGGTGCAATTTTAGCAGCA
AATATGGGAAAGCTTCTGGCCAGGTTTTCTGGCCAGAAAAGAGAAGCTGGCTTAGTAATCGATGTGATCGTAATACCTGCATTTGGGCTGCTCAAGAGGGTGGGATTTAC
TTGCGTCTTGGTTATTTTGATTACTATCAATTAATATATCCTTGGAAATGA
Protein sequenceShow/hide protein sequence
MIKSGFAQSKVQDPLSPWEVAILNNMKDSTLVAHCKSKDDDLGEHVINVGGKYYWMFSENLWQTTLYWCNFSSKYGKASGQVFWPEKRSWLSNRCDRNTCIWAAQEGGIY
LRLGYFDYYQLIYPWK