; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024280 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024280
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncleavage stimulating factor 64
Genome locationchr10:1834127..1837318
RNA-Seq ExpressionLag0024280
SyntenyLag0024280
Gene Ontology termsGO:0009749 - response to glucose (biological process)
GO:0031124 - mRNA 3'-end processing (biological process)
GO:0035194 - posttranscriptional gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR025742 - Cleavage stimulation factor subunit 2, hinge domain
IPR026896 - Transcription termination and cleavage factor, C-terminal domain
IPR038192 - Transcription termination and cleavage factor, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458086.1 PREDICTED: extensin [Cucumis melo]2.6e-18789Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+ S+QPSASQHSQPST  TQQSN+QPTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
         QISLQEQTSAPPLAPPRKQYQNQPSMPISST  PT NIQP+  PL+PLQ PQHPKGF++PQANPISVPQPSQIPSV PILPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQ-PPPQSMYQAGGSK
        Q+QQPLQ+AE+ HLP QAPLPPHSR PTGPNFHQHYPPQMGHNMNYQP G+PQHVSQPMFHSG  TK PPG+GNSFPQGQS LPSQ PPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQ-PPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIP-GQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPPP+PS+P GQMGP+NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIP-GQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

XP_022137042.1 RNA-binding protein 33 isoform X1 [Momordica charantia]2.3e-19190.73Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI S+QPS S HSQPSTHTT QSNIQPTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
        GQISLQEQT+APPLAPPRKQYQNQPSMPISST  PTVN+QPQSAPL+PLQ PQHPKGFEM QANPISVPQPSQ+PSVPP+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK
        Q+QQPLQ+AEIPHLPLQAPLPP SRAPTGPNFHQHYP Q+GHNMNYQPAG+PQHVSQPMFHSG  TK PPGIGNSF PQGQSA+PSQPPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPP  PS+PGQMGP NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

XP_022137043.1 RNA-binding protein 33 isoform X2 [Momordica charantia]1.1e-19090.48Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI S+QPS S HSQPSTHTT QSNIQPTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
        GQISLQEQT+APPLAPPRKQYQNQPSMPISST  PTVN+QPQSAPL+PLQ PQHPKGFEM QANPISVPQPSQ+PSVPP+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK
        Q+QQPLQ+AEIPHLPLQAPLPP SRAPTGPNFHQHYP Q+GHNMNYQPAG+PQHVSQPMFH G  TK PPGIGNSF PQGQSA+PSQPPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPP  PS+PGQMGP NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

XP_023519984.1 cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]1.1e-18588.19Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQV G GLPESIAGMSKNQLY+IMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI SV PSASQHSQPSTHTTQQSNIQPTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
         QI+LQEQTS PPLAPPRKQYQNQPSMP+SST  PT NIQP+SAPL+PLQ PQHPKGF+MPQANP S PQPSQIP+VPPILPSAAQPPLLHQP ISTASI
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKV
        Q+QQPLQ+AEIPHLP  APLP HSRAPTGPNFHQHYPPQMGHNMNYQP G+PQHVSQP+FHSG  TK PPG+GNSFP GQSALPSQPPPQSMYQAGGSK+
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKV

Query:  GSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        G+EFMNQVG+SKPADRGPWMPGPPENPT P QL+GPPP+PS+ GQM P NQPR APPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Subjt:  GSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

XP_038894222.1 cleavage stimulating factor 64 [Benincasa hispida]2.6e-18788.94Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI S+QPSASQHSQPST  TQQSNIQPTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
         QISLQEQTSAP LAP RKQYQNQPSMPISST  PTVNIQP+S PL+PLQ PQHPKGF++PQ+NPISVPQPSQIPSV P+LPS+AQPPLLHQP +STAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKV
        Q+QQPLQ+AEI HLP QAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQP G+PQHVSQPMFHSG  TK PPG+GNSF QGQS LPSQPPPQSMYQAGGSK+
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKV

Query:  GSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPPP+PS+PG MGP+NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Subjt:  GSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LQD8 Uncharacterized protein7.0e-18688.75Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+ S+QPSASQHSQPST  TQQSN+QPTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
         QISLQEQTSAPPLAP RKQYQNQPSMPISST  PT NIQP+  PL+PLQ PQHPKGF++PQANPISVPQPSQIPSV PILPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQ-PPPQSMYQAGGSK
        Q+QQPLQ+AEI HLP QA LPPHSR PTGPNFHQHYPPQMGHNMNYQP G+PQHVSQPMFHSG  TK PPG+GNSFPQGQS LPSQ PPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQ-PPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIP-GQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPPP+PS+P GQMGP+NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIP-GQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

A0A1S3C700 extensin1.3e-18789Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQV+GAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQ+ S+QPSASQHSQPST  TQQSN+QPTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
         QISLQEQTSAPPLAPPRKQYQNQPSMPISST  PT NIQP+  PL+PLQ PQHPKGF++PQANPISVPQPSQIPSV PILPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQ-PPPQSMYQAGGSK
        Q+QQPLQ+AE+ HLP QAPLPPHSR PTGPNFHQHYPPQMGHNMNYQP G+PQHVSQPMFHSG  TK PPG+GNSFPQGQS LPSQ PPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQ-PPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIP-GQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPPP+PS+P GQMGP+NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIP-GQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

A0A6J1C742 RNA-binding protein 33 isoform X11.1e-19190.73Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI S+QPS S HSQPSTHTT QSNIQPTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
        GQISLQEQT+APPLAPPRKQYQNQPSMPISST  PTVN+QPQSAPL+PLQ PQHPKGFEM QANPISVPQPSQ+PSVPP+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK
        Q+QQPLQ+AEIPHLPLQAPLPP SRAPTGPNFHQHYP Q+GHNMNYQPAG+PQHVSQPMFHSG  TK PPGIGNSF PQGQSA+PSQPPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPP  PS+PGQMGP NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

A0A6J1C968 RNA-binding protein 33 isoform X25.6e-19190.48Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQVAG GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI S+QPS S HSQPSTHTT QSNIQPTQTPA
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
        GQISLQEQT+APPLAPPRKQYQNQPSMPISST  PTVN+QPQSAPL+PLQ PQHPKGFEM QANPISVPQPSQ+PSVPP+LPSAAQPPLLHQP ISTAS+
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK
        Q+QQPLQ+AEIPHLPLQAPLPP SRAPTGPNFHQHYP Q+GHNMNYQPAG+PQHVSQPMFH G  TK PPGIGNSF PQGQSA+PSQPPPQSMYQAGGSK
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSF-PQGQSALPSQPPPQSMYQAGGSK

Query:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        +G+EFMNQVGTSKPADRGPWMPGPPENPTLP QLSGPP  PS+PGQMGP NQPRPAPPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQV QLQKILRQ
Subjt:  VGSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

A0A6J1E818 proline-rich protein 36-like5.4e-18688.44Show/hide
Query:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA
        MAGKQV G GLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQI SV PSASQHSQP THTTQQSNIQPTQT A
Subjt:  MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPA

Query:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI
         QISLQEQTS PPLAPPRKQYQNQPSMP+SST  PT NIQP+SAPL+PLQ PQHPKGF+MPQANP S PQPSQIP+VPPILPSAAQPPLLHQP ISTASI
Subjt:  GQISLQEQTSAPPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASI

Query:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKV
        Q+QQPLQ+AEIPHLP  APLP HSRAPTGPNFHQHYPPQ+GHNMNYQP G+PQHVSQP+FHSG  TK PPG+GNSFP GQSALPSQP PQSMYQAGGSK+
Subjt:  QMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKV

Query:  GSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
        G+EFMNQVG+SKPADRGPWMPGPPENPT P QLSGPPP+PS+ GQMGP NQPR APPLS+EMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
Subjt:  GSEFMNQVGTSKPADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

SwissProt top hitse value%identityAlignment
Q9M9G6 Cleavage stimulating factor 646.0e-0927.79Show/hide
Query:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPAGQISLQEQTSAPPL
        +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P  + S         Q  +H T  S+IQ  Q       L  Q   PPL
Subjt:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPAGQISLQEQTSAPPL

Query:  APPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASIQMQQPLQSAEIPHL
        A        Q S  +S  PH    +Q QS+     Q PQ              V QP          PS+  PP   Q  +  A  Q QQ + ++     
Subjt:  APPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASIQMQQPLQSAEIPHL

Query:  PLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPA-GMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKVGSEFMNQVGTSKP
                                    N+ Y     +P +  QP                      S +P Q  P S+ Q GG  V   F  ++    P
Subjt:  PLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPA-GMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKVGSEFMNQVGTSKP

Query:  ADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
              M  P +   +  + +   P   +   M P+    P   +S +++  LLQQVM+LTPEQ+ LL PEQ+ +VL+LQ+ L+Q
Subjt:  ADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

Arabidopsis top hitse value%identityAlignment
AT1G71800.1 cleavage stimulating factor 644.3e-1027.79Show/hide
Query:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPAGQISLQEQTSAPPL
        +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V P  + S         Q  +H T  S+IQ  Q       L  Q   PPL
Subjt:  IAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPAGQISLQEQTSAPPL

Query:  APPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASIQMQQPLQSAEIPHL
        A        Q S  +S  PH    +Q QS+     Q PQ              V QP          PS+  PP   Q  +  A  Q QQ + ++     
Subjt:  APPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASIQMQQPLQSAEIPHL

Query:  PLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPA-GMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKVGSEFMNQVGTSKP
                                    N+ Y     +P +  QP                      S +P Q  P S+ Q GG  V   F  ++    P
Subjt:  PLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPA-GMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKVGSEFMNQVGTSKP

Query:  ADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ
              M  P +   +  + +   P   +   M P+    P   +S +++  LLQQVM+LTPEQ+ LL PEQ+ +VL+LQ+ L+Q
Subjt:  ADRGPWMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ

AT1G73840.1 hydroxyproline-rich glycoprotein family protein1.3e-6248.54Show/hide
Query:  MAGKQVAG-AGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIS-SVQPSASQHSQPSTHT-TQQSNIQPTQ
        MAGKQ+ G  GLP ++AGM+K+QLYDIMSQMKTLI+QN QQA++ILI+NPLLTKALFQAQIMLGMV+PPQ++  V+P A Q  Q S  +   + N+Q   
Subjt:  MAGKQVAG-AGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQIS-SVQPSASQHSQPSTHT-TQQSNIQPTQ

Query:  TP-AGQISLQEQTSA-PPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPIL---PSAAQPPLLH-
        +   G  S+ E  +   P AP RK    QP MP+   P P  ++   SA   P  +    +G   P    +S PQ SQ+ + PP     P++ QPP  H 
Subjt:  TP-AGQISLQEQTSA-PPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPIL---PSAAQPPLLH-

Query:  QPPISTASIQMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMP-QHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQ
          P S+  +Q QQP+ S   PH+  Q   P H         HQ+   Q G N  +Q  G P QH+SQPM+HSG   + P   G  FPQGQ  LPSQP   
Subjt:  QPPISTASIQMQQPLQSAEIPHLPLQAPLPPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMP-QHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQ

Query:  SMYQAGGSKVGSEFMNQVGTSKPADRGP-WMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAP-PLSREMEKMLLQQVMSLTPEQINLLPPEQRNQ
          YQ GG   G    NQ+      DRGP WM G  E+  +   L G  P+P  P Q+GP   P P P P+S EMEK LLQQVMSLTPEQINLLPPEQRNQ
Subjt:  SMYQAGGSKVGSEFMNQVGTSKPADRGP-WMPGPPENPTLPPQLSGPPPMPSIPGQMGPSNQPRPAP-PLSREMEKMLLQQVMSLTPEQINLLPPEQRNQ

Query:  VLQLQKILRQ
        VLQLQ+ILRQ
Subjt:  VLQLQKILRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAAAGCAAGTTGCCGGCGCCGGTCTGCCGGAGAGCATTGCAGGAATGTCGAAGAACCAACTATATGATATCATGTCTCAAATGAAGACTCTGATCGAACAGAA
TCAGCAGCAGGCCAAACAAATCCTAATCCAAAACCCGCTCTTGACGAAAGCTCTCTTTCAGGCACAGATTATGCTTGGGATGGTACGGCCTCCTCAGATTTCAAGCGTTC
AGCCTTCAGCCTCACAGCATTCTCAGCCATCAACACACACAACTCAACAGTCAAATATTCAGCCTACTCAAACACCAGCAGGTCAAATAAGTTTGCAAGAACAGACAAGT
GCACCACCGTTGGCCCCTCCTAGAAAACAATACCAGAACCAACCATCAATGCCTATCTCATCAACCCCTCATCCTACAGTGAACATACAACCTCAGTCAGCACCTCTGGT
TCCCCTGCAGGCACCACAGCATCCCAAGGGATTTGAGATGCCCCAAGCAAATCCCATTTCTGTCCCACAACCCTCTCAAATTCCAAGTGTACCTCCAATTCTTCCATCTG
CTGCTCAGCCACCTTTACTTCATCAACCCCCCATTTCAACTGCTTCCATACAAATGCAGCAGCCATTACAATCAGCTGAAATTCCCCACCTGCCGTTACAGGCACCATTG
CCCCCACATTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCCTCAAATGGGGCACAATATGAATTACCAACCTGCTGGCATGCCACAGCATGTTTCACA
ACCCATGTTTCATTCAGGTACCAGTACCAAACACCCTCCTGGTATAGGAAATTCCTTTCCCCAGGGACAGTCAGCACTTCCTAGTCAACCACCCCCTCAATCAATGTATC
AGGCTGGAGGTTCTAAAGTAGGTTCAGAATTCATGAATCAAGTTGGAACTTCAAAGCCGGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCTACACTTCCT
CCGCAACTCTCGGGACCACCACCTATGCCATCAATCCCTGGTCAGATGGGCCCTAGCAATCAGCCTCGTCCTGCACCGCCGTTGAGTCGGGAGATGGAGAAGATGCTACT
TCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTTCTGCCTCCAGAGCAAAGGAATCAAGTGCTTCAGCTACAGAAGATACTGCGCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAAAGCAAGTTGCCGGCGCCGGTCTGCCGGAGAGCATTGCAGGAATGTCGAAGAACCAACTATATGATATCATGTCTCAAATGAAGACTCTGATCGAACAGAA
TCAGCAGCAGGCCAAACAAATCCTAATCCAAAACCCGCTCTTGACGAAAGCTCTCTTTCAGGCACAGATTATGCTTGGGATGGTACGGCCTCCTCAGATTTCAAGCGTTC
AGCCTTCAGCCTCACAGCATTCTCAGCCATCAACACACACAACTCAACAGTCAAATATTCAGCCTACTCAAACACCAGCAGGTCAAATAAGTTTGCAAGAACAGACAAGT
GCACCACCGTTGGCCCCTCCTAGAAAACAATACCAGAACCAACCATCAATGCCTATCTCATCAACCCCTCATCCTACAGTGAACATACAACCTCAGTCAGCACCTCTGGT
TCCCCTGCAGGCACCACAGCATCCCAAGGGATTTGAGATGCCCCAAGCAAATCCCATTTCTGTCCCACAACCCTCTCAAATTCCAAGTGTACCTCCAATTCTTCCATCTG
CTGCTCAGCCACCTTTACTTCATCAACCCCCCATTTCAACTGCTTCCATACAAATGCAGCAGCCATTACAATCAGCTGAAATTCCCCACCTGCCGTTACAGGCACCATTG
CCCCCACATTCCAGAGCACCTACGGGTCCAAATTTCCATCAGCACTACCCCCCTCAAATGGGGCACAATATGAATTACCAACCTGCTGGCATGCCACAGCATGTTTCACA
ACCCATGTTTCATTCAGGTACCAGTACCAAACACCCTCCTGGTATAGGAAATTCCTTTCCCCAGGGACAGTCAGCACTTCCTAGTCAACCACCCCCTCAATCAATGTATC
AGGCTGGAGGTTCTAAAGTAGGTTCAGAATTCATGAATCAAGTTGGAACTTCAAAGCCGGCGGACAGAGGGCCTTGGATGCCTGGCCCTCCAGAGAATCCTACACTTCCT
CCGCAACTCTCGGGACCACCACCTATGCCATCAATCCCTGGTCAGATGGGCCCTAGCAATCAGCCTCGTCCTGCACCGCCGTTGAGTCGGGAGATGGAGAAGATGCTACT
TCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTTCTGCCTCCAGAGCAAAGGAATCAAGTGCTTCAGCTACAGAAGATACTGCGCCAATGA
Protein sequenceShow/hide protein sequence
MAGKQVAGAGLPESIAGMSKNQLYDIMSQMKTLIEQNQQQAKQILIQNPLLTKALFQAQIMLGMVRPPQISSVQPSASQHSQPSTHTTQQSNIQPTQTPAGQISLQEQTS
APPLAPPRKQYQNQPSMPISSTPHPTVNIQPQSAPLVPLQAPQHPKGFEMPQANPISVPQPSQIPSVPPILPSAAQPPLLHQPPISTASIQMQQPLQSAEIPHLPLQAPL
PPHSRAPTGPNFHQHYPPQMGHNMNYQPAGMPQHVSQPMFHSGTSTKHPPGIGNSFPQGQSALPSQPPPQSMYQAGGSKVGSEFMNQVGTSKPADRGPWMPGPPENPTLP
PQLSGPPPMPSIPGQMGPSNQPRPAPPLSREMEKMLLQQVMSLTPEQINLLPPEQRNQVLQLQKILRQ