CuGenDBv2

Gene ID	Lag0024340
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	chr10:2249806..2250463
RNA-Seq Expression	Lag0024340
Synteny	Lag0024340
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6584313.1 hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-91

93.19

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKTT APALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GN VDLEGVV+ADQQRNGR+LFADGRVLPPAQT+E+ SAAGALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]

5.5e-90

92.15

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGN VDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]

7.7e-92

93.72

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKTT APALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GN VDLEGVV+ADQQRNGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

1.7e-91

93.19

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH+AA AAA   GGGSRKSKKPKRKTT APALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GN VDLEGVV+ADQQRNGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

XP_038895169.1 uncharacterized protein At3g17950 [Benincasa hispida]

3.2e-90

92.15

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA AAA   GGGSRKSKK KRKT+TAPALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGN VDLEGVVA DQQRNGR+LFADGRVLPPA+TE++ SAAGALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

2.7e-90

92.15

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGN VDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

2.7e-90

92.15

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGN VDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

A0A5D3BLI7 Putative nuclease HARBI1

2.7e-90

92.15

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA   A   GGGSRKSKK KRKTTTAPALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAFYGN VDLEGVV ADQQRNGR+LFADGRVLPPAQTEE+ SA GALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

A0A6J1E8Y2 uncharacterized protein At3g17950

3.7e-92

93.72

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Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAA AAA   GGGSRKSKKPKRKTT APALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAF+GN VDLEGVV+ADQQRNGR+LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

A0A6J1KNQ0 uncharacterized protein At3g17950-like

7.7e-90

92.15

Show/hide

Query:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR
        MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQH AA  AA   GGGSRKSKKPKRKTT APALVADRKR
Subjt:  MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKR

Query:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG
        RWWRLCRDDGVKPASLG+FLEVERRFGDGAF+ N VDLEGVV+ADQQRNGR LFADGRVLPPAQTEE+ SAAGALCRFSVSLTGICSGGAG
Subjt:  RWWRLCRDDGVKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

4.7e-36

50.49

Show/hide

Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVP--SQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A T  +P  + +R   + + A + A    +R++ + KR  + +      R+R+WWR CRDD
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVP--SQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD

Query:  -------GV-------KPASLGDFLEVERRFGDGAFYGNG-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGI
               G+       K +SLG++LEVERRFGD A Y +   +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGI
Subjt:  -------GV-------KPASLGDFLEVERRFGDGAFYGNG-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGI

Query:  CSGGAG
        CSGG G
Subjt:  CSGGAG

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

3.4e-37

50.49

Show/hide

Query:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVP--SQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD
        PSSPT SS+SSSDLDTESTGSFFHDRS +LGTLMG SF A T  +P  + +R   + + A + A    +R++ + KR  + +      R+R+WWR CRDD
Subjt:  PSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVP--SQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD

Query:  -------GV-------KPASLGDFLEVERRFGDGAFYGNG-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGI
               G+       K +SLG++LEVERRFGD A Y +   +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGI
Subjt:  -------GV-------KPASLGDFLEVERRFGDGAFYGNG-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGI

Query:  CSGGAG
        CSGG G
Subjt:  CSGGAG

AT3G17950.2 unknown protein

8.9e-22

43.35

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Query:  MGVSFPAITFRVP--SQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFGD
        MG SF A T  +P  + +R   + + A + A    +R++ + KR  + +      R+R+WWR CRDD       G+       K +SLG++LEVERRFGD
Subjt:  MGVSFPAITFRVP--SQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDD-------GV-------KPASLGDFLEVERRFGD

Query:  GAFYGNG-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG
         A Y +   +LE  V A   DQQ     R LFADGRVLPPA  E    E    A +LCRF VSLTGICSGG G
Subjt:  GAFYGNG-VDLEGVVAA---DQQ--RNGRNLFADGRVLPPAQTE----EEASAAGALCRFSVSLTGICSGGAG

AT5G02440.1 unknown protein

4.4e-05

52.73

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Query:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQHAAA
        SP+ SS SSSDLD++S GSFF DRS +LG L+G+ SF  ++ R      DQ  AA
Subjt:  SPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGV-SFPAITFRVPSQNRDQHAAA

Sequences

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CDS sequence

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ATGTTGAATCCGGCGAACGATCTGTTACCGCCGCCGTCTTCTCCGACCAATTCATCCATTTCCTCCTCCGATCTCGACACTGAGTCTACAGGTTCGTTCTTCCATGACAG
GAGCACGAGCTTGGGGACTCTAATGGGGGTGAGCTTCCCGGCGATTACCTTCCGAGTGCCCTCACAGAACCGAGACCAACACGCCGCTGCAAACGCCGCCGCGGCAGCCG
GCGGGGGCGGTTCGCGGAAGAGCAAGAAGCCCAAGAGAAAAACGACGACGGCGCCAGCACTGGTCGCAGATCGAAAGCGGAGGTGGTGGCGGCTGTGCAGAGACGACGGC
GTTAAGCCGGCATCTCTCGGTGATTTTCTCGAGGTGGAACGGAGATTTGGGGACGGTGCCTTTTATGGCAACGGGGTGGATCTGGAAGGCGTGGTTGCGGCGGATCAACA
GAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGTTCTACCGCCGGCGCAAACGGAGGAAGAAGCCTCGGCGGCGGGGGCTCTATGCCGATTTTCCGTATCGCTCACCG
GAATTTGCAGCGGCGGTGCCGGCTAA

mRNA sequence

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Protein sequence

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MLNPANDLLPPPSSPTNSSISSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRVPSQNRDQHAAANAAAAAGGGGSRKSKKPKRKTTTAPALVADRKRRWWRLCRDDG
VKPASLGDFLEVERRFGDGAFYGNGVDLEGVVAADQQRNGRNLFADGRVLPPAQTEEEASAAGALCRFSVSLTGICSGGAG

Lag0024340 (gene) of Sponge gourd (AG-4) v1 genome