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Lag0024394 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024394
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr10:2747106..2747814
RNA-Seq ExpressionLag0024394
SyntenyLag0024394
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RID41131.1 hypothetical protein BRARA_J01114 [Brassica rapa]2.4e-0449.33Show/hide
Query:  RAMDESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS
        R  D S GTNFEFVE+ KAN Y   +G  YFITF  K    P D  T  FQAK I    +    I + FCRLKP+
Subjt:  RAMDESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS

XP_022137489.1 uncharacterized protein LOC111008920 isoform X2 [Momordica charantia]5.6e-0630.12Show/hide
Query:  SSPPEFDFPHYFDSD--DEGCSRSSRPPSPIS----------SEEYFEYGIRGTNKEEEEEYSRAMDES----------------------------EGT
        SSP   ++ + FDSD  DE         S +S          S+ Y++ G+R  N+EE   Y +A+ ES                            EG 
Subjt:  SSPPEFDFPHYFDSD--DEGCSRSSRPPSPIS----------SEEYFEYGIRGTNKEEEEEYSRAMDES----------------------------EGT

Query:  NFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS
        +FEFV+++KAN      G  +F+TF+ K  G+P D PTTT QA+ +      D   +V  CR +P+
Subjt:  NFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS

XP_022942206.1 uncharacterized protein LOC111447330 [Cucurbita moschata]1.1e-0433.33Show/hide
Query:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI
        S +E+F+ G     K+EE EY  A++ES+                                              GTNFE V+IVKAN +    G  Y+I
Subjt:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI

Query:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS
        TF  K IG+P ++P+ TFQAK  VYY +   + I+V  CR KPS
Subjt:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS

XP_022975633.1 uncharacterized protein LOC111475320 [Cucurbita maxima]2.4e-0433.33Show/hide
Query:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI
        S +E+F+ G     K+EE EY  A++ES+                                              GTNFE V+IVKAN +    G  Y+I
Subjt:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI

Query:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS
        TF  K IG+ +++P+ TFQAK  VYY +   + IEV  CR KPS
Subjt:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS

XP_023548353.1 UPF0725 protein At1g02770-like [Cucurbita pepo subsp. pepo]1.8e-0447.95Show/hide
Query:  DESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS
        +   GTNFE V+IVKAN +    G  Y+ITF  K IG+  ++P  TFQAK  VYY +   + I+V  CR KPS
Subjt:  DESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS

TrEMBL top hitse value%identityAlignment
A0A6J1C7D4 uncharacterized protein LOC111008920 isoform X22.7e-0630.12Show/hide
Query:  SSPPEFDFPHYFDSD--DEGCSRSSRPPSPIS----------SEEYFEYGIRGTNKEEEEEYSRAMDES----------------------------EGT
        SSP   ++ + FDSD  DE         S +S          S+ Y++ G+R  N+EE   Y +A+ ES                            EG 
Subjt:  SSPPEFDFPHYFDSD--DEGCSRSSRPPSPIS----------SEEYFEYGIRGTNKEEEEEYSRAMDES----------------------------EGT

Query:  NFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS
        +FEFV+++KAN      G  +F+TF+ K  G+P D PTTT QA+ +      D   +V  CR +P+
Subjt:  NFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS

A0A6J1FN74 uncharacterized protein LOC1114473305.1e-0533.33Show/hide
Query:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI
        S +E+F+ G     K+EE EY  A++ES+                                              GTNFE V+IVKAN +    G  Y+I
Subjt:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI

Query:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS
        TF  K IG+P ++P+ TFQAK  VYY +   + I+V  CR KPS
Subjt:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS

A0A6J1IJT3 uncharacterized protein LOC1114753201.1e-0433.33Show/hide
Query:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI
        S +E+F+ G     K+EE EY  A++ES+                                              GTNFE V+IVKAN +    G  Y+I
Subjt:  SSEEYFEYGIRGTNKEEEEEYSRAMDESE----------------------------------------------GTNFEFVEIVKANRYPWPTGPEYFI

Query:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS
        TF  K IG+ +++P+ TFQAK  VYY +   + IEV  CR KPS
Subjt:  TFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS

A0A6J1IL21 uncharacterized protein LOC1114751781.1e-0442.55Show/hide
Query:  YGIRGTNKEEEEEYSRAM---DESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS
        +G  G  KE +   + A+   +   GTNFE V+IVKAN +    G  Y+ITF  K IG+ +++ + TFQAK  VYY +   + IEV  CR KPS
Subjt:  YGIRGTNKEEEEEYSRAM---DESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHN-IEVHFCRLKPS

M4CF01 Uncharacterized protein1.1e-0449.33Show/hide
Query:  RAMDESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS
        R  D S GTNFEFVE+ KAN Y   +G  YFITF  K    P D  T  FQAK I    +    I + FCRLKP+
Subjt:  RAMDESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYYDMHDHNIEVHFCRLKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCCACCTGAATTCGACTTTCCTCATTACTTTGATAGTGATGATGAAGGTTGTTCTCGTTCTTCCCGTCCACCTTCCCCAATTAGTTCTGAAGAATATTTTGA
ATATGGCATCCGTGGAACCAATAAGGAAGAGGAAGAAGAATATTCTCGTGCTATGGATGAATCCGAGGGTACAAATTTTGAATTTGTGGAAATTGTAAAGGCAAATCGAT
ATCCATGGCCAACTGGTCCTGAGTATTTCATAACCTTTGAGGGCAAATATATTGGAAGTCCCTCAGATTACCCTACCACCACCTTCCAAGCTAAAGCTATAGTGTATTAT
GACATGCATGATCATAATATAGAGGTACATTTTTGCAGGCTCAAACCCTCCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCCACCTGAATTCGACTTTCCTCATTACTTTGATAGTGATGATGAAGGTTGTTCTCGTTCTTCCCGTCCACCTTCCCCAATTAGTTCTGAAGAATATTTTGA
ATATGGCATCCGTGGAACCAATAAGGAAGAGGAAGAAGAATATTCTCGTGCTATGGATGAATCCGAGGGTACAAATTTTGAATTTGTGGAAATTGTAAAGGCAAATCGAT
ATCCATGGCCAACTGGTCCTGAGTATTTCATAACCTTTGAGGGCAAATATATTGGAAGTCCCTCAGATTACCCTACCACCACCTTCCAAGCTAAAGCTATAGTGTATTAT
GACATGCATGATCATAATATAGAGGTACATTTTTGCAGGCTCAAACCCTCCACCTAG
Protein sequenceShow/hide protein sequence
MSSPPEFDFPHYFDSDDEGCSRSSRPPSPISSEEYFEYGIRGTNKEEEEEYSRAMDESEGTNFEFVEIVKANRYPWPTGPEYFITFEGKYIGSPSDYPTTTFQAKAIVYY
DMHDHNIEVHFCRLKPST