; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024407 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024407
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBHLH domain-containing protein
Genome locationchr10:2831610..2831964
RNA-Seq ExpressionLag0024407
SyntenyLag0024407
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0040008 - regulation of growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044293 - Transcription factor PRE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573012.1 putative serine/threonine-protein kinase PBL3, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3595.65Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

XP_004152438.1 transcription factor PRE3 [Cucumis sativus]1.1e-3595.65Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

XP_016899225.1 PREDICTED: transcription factor PRE3-like [Cucumis melo]2.2e-3696.74Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+GVRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

XP_022955105.1 transcription factor PRE3-like [Cucurbita moschata]1.1e-3595.65Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

XP_023542851.1 transcription factor PRE3-like [Cucurbita pepo subsp. pepo]1.4e-3594.57Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+ +RISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ1 BHLH domain-containing protein5.3e-3695.65Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

A0A1S4DU40 transcription factor PRE3-like1.1e-3696.74Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+GVRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

A0A5D3BJ22 Transcription factor PRE3-like2.2e-3496.59Show/hide
Query:  SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        SRSRQS+GVRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

A0A6J1GU92 transcription factor PRE3-like5.3e-3695.65Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSGRSRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

A0A6J1K5U5 transcription factor PRE3-like4.5e-3594.57Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSG SRSRQS+ VRISDEQITDLVHKLQQLLPEIR  NRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

SwissProt top hitse value%identityAlignment
A2Z730 Transcription factor ILI73.4e-2470.65Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        MS RSRSR S+  RI+DEQI DLV KLQ LLPE R   R +D+V +A+VLQETC+YIRSLHREVDDLSERL+ELLA +D  TAQAA+IR LL
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL

B8APB5 Transcription factor ILI62.4e-2574.73Show/hide
Query:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        S RSRSRQS   RI+DEQI+DLV KLQ LLPE R   R +D+V +++VLQETCNYIRSLH+EVDDLSERLSELLATSD  +AQAAIIRSLL
Subjt:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL

Q0DUR2 Transcription factor ILI62.4e-2574.73Show/hide
Query:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        S RSRSRQS   RI+DEQI+DLV KLQ LLPE R   R +D+V +++VLQETCNYIRSLH+EVDDLSERLSELLATSD  +AQAAIIRSLL
Subjt:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL

Q8GW32 Transcription factor PRE62.8e-2674.47Show/hide
Query:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+RR  R SDKVSA+KVLQETCNYIR+LHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Subjt:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL

Q9CA64 Transcription factor PRE39.3e-3079.79Show/hide
Query:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSG RSRSRQS+G  RIS++QI DL+ KLQQLLPE+ R++R SDKVSAA+VLQ+TCNYIR+LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Subjt:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

Arabidopsis top hitse value%identityAlignment
AT1G26945.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.0e-2774.47Show/hide
Query:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        MS R  SRSRQS   RISD+QI+DLV KLQ L+PE+RR  R SDKVSA+KVLQETCNYIR+LHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Subjt:  MSGR--SRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL

AT1G74500.1 activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 16.6e-3179.79Show/hide
Query:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        MSG RSRSRQS+G  RIS++QI DL+ KLQQLLPE+ R++R SDKVSAA+VLQ+TCNYIR+LHREVDDLSERLSELLA SDTAQAA+IRSLLTQ
Subjt:  MSG-RSRSRQSAGV-RISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

AT3G28857.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.2e-2163.04Show/hide
Query:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELL--ATSDTAQAAIIRSLL
        MS R   + S   RISD+Q+ DLV KL+Q LPEI    R SDKVSA+KVLQETCNYIR LHREVD+LS+RLS+LL     D+ +AA+IRSLL
Subjt:  MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELL--ATSDTAQAAIIRSLL

AT3G47710.1 BANQUO 33.5e-2465.93Show/hide
Query:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ
        S +SRSRQ+    I+DEQI DLV +L +LLPE+  NNR S KVSA++VLQETC+YIR+L +EVDDLSERLS+LL ++D+AQAA+IRSLL Q
Subjt:  SGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ

AT5G15160.1 BANQUO 21.2e-2162.37Show/hide
Query:  MSGRSRSRQ-SAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL
        MS   RSRQ S+  RISD+QITDL+ KL+Q +PEIR+ NR S+ VSA+KVLQETCNYIR+L++E DDLS+RL++LL + D  + QAA+IRSL+
Subjt:  MSGRSRSRQ-SAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSD--TAQAAIIRSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCAGATCTCGTTCGAGGCAATCAGCTGGTGTTAGAATCAGCGACGAGCAGATCACGGACCTCGTTCACAAGTTGCAACAGCTGCTGCCCGAGATTCGTCGCAA
CAACAGGCACTCTGACAAGGTTTCAGCAGCGAAGGTGTTGCAAGAGACATGCAATTACATTCGAAGTCTACACAGAGAAGTGGATGATCTGAGTGAGAGATTGTCGGAGT
TGTTGGCCACATCGGACACAGCCCAAGCGGCCATTATAAGAAGCTTGCTCACGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCAGATCTCGTTCGAGGCAATCAGCTGGTGTTAGAATCAGCGACGAGCAGATCACGGACCTCGTTCACAAGTTGCAACAGCTGCTGCCCGAGATTCGTCGCAA
CAACAGGCACTCTGACAAGGTTTCAGCAGCGAAGGTGTTGCAAGAGACATGCAATTACATTCGAAGTCTACACAGAGAAGTGGATGATCTGAGTGAGAGATTGTCGGAGT
TGTTGGCCACATCGGACACAGCCCAAGCGGCCATTATAAGAAGCTTGCTCACGCAGTGA
Protein sequenceShow/hide protein sequence
MSGRSRSRQSAGVRISDEQITDLVHKLQQLLPEIRRNNRHSDKVSAAKVLQETCNYIRSLHREVDDLSERLSELLATSDTAQAAIIRSLLTQ