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Lag0024417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein PXR1
Genome locationchr10:2915210..2915914
RNA-Seq ExpressionLag0024417
SyntenyLag0024417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584261.1 hypothetical protein SDJN03_20193, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1671Show/hide
Query:  MGETSEEKHEEKVEKKE-KKDKEKHEGDEE-----------------KKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPP
        MG TSEEKHE KVEKKE KKDKEKHE +EE                 +KKEKKKKDPAD KDP KLRQKLEKLE KMQALAVKKEE+LKL+HEAEQNA P
Subjt:  MGETSEEKHEEKVEKKE-KKDKEKHEGDEE-----------------KKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPP

KAG7012203.1 Protein QUIRKY, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-1874.75Show/hide
Query:  QINIMGETSEEKHEEKVEKKEKKDKEKHEGDEEK---------KKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQN---APPP
        ++NIMG  SEEKHE+KVEKKEKK +E  EGDE+K         KKEKK KDPADKKDPTKLRQKLEKLE KMQALAVKKEE+LKLLHEAEQN   APPP
Subjt:  QINIMGETSEEKHEEKVEKKEKKDKEKHEGDEEK---------KKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQN---APPP

XP_008437610.1 PREDICTED: protein PXR1 [Cucumis melo]1.3e-2289.53Show/hide
Query:  MGETSEEKHEEKVEKKEKKDKEKH-EG-DEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS
        MGETSEEKHE KVEKKEKKDKEKH EG DEEKKK+KK+K+PADKKDPTKLRQKLEKLE KMQALAVKKEE+LKLLHEAEQN PPPS
Subjt:  MGETSEEKHEEKVEKKEKKDKEKH-EG-DEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS

XP_022923831.1 protein PXR1 [Cucurbita moschata]2.9e-1758.96Show/hide
Query:  LQTNNCTTIYSVCLQFCHKRATADTTSLQFQINIMGETSEEKHEEKVEKKE-KKDKEKHEGDEE-----------------KKKEKKKKDPADKKDPTKL
        L  NNC TI+   +QF        T         MG TSEEKHE KVEKKE KKDKEKHE +E+                 +KKEKKKKDPAD KDP KL
Subjt:  LQTNNCTTIYSVCLQFCHKRATADTTSLQFQINIMGETSEEKHEEKVEKKE-KKDKEKHEGDEE-----------------KKKEKKKKDPADKKDPTKL

Query:  RQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPP
        RQKLEKLE KMQALAVKKEE+LKL+HEAEQNA P
Subjt:  RQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPP

XP_022994123.1 protein PXR1 [Cucurbita maxima]1.4e-1671.29Show/hide
Query:  MGETSEEKHEEKVEKKEKKDKEK--------------HEGDEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQN---APPP
        MG  SEEKHE+KVEKKEKK +E+               EG E +KKEKK KDPADKKDPTKLRQKLEKLE KMQALAVKKEEVLKLLHEAEQN   APPP
Subjt:  MGETSEEKHEEKVEKKEKKDKEK--------------HEGDEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQN---APPP

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A0A0LQQ8 Uncharacterized protein2.3e-2081.32Show/hide
Query:  MGETSEEKHE---EKVEKKEKKDKEKH----EGDEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS
        MGETSEEKHE   EK EKKEKKDKEKH    E +E+KKK+KK+KDPADKKDPTKLRQKLEKLE KMQALAVKKEE+LKLLHEAEQN PP S
Subjt:  MGETSEEKHE---EKVEKKEKKDKEKH----EGDEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS

A0A1S3AV24 protein PXR16.4e-2389.53Show/hide
Query:  MGETSEEKHEEKVEKKEKKDKEKH-EG-DEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS
        MGETSEEKHE KVEKKEKKDKEKH EG DEEKKK+KK+K+PADKKDPTKLRQKLEKLE KMQALAVKKEE+LKLLHEAEQN PPPS
Subjt:  MGETSEEKHEEKVEKKEKKDKEKH-EG-DEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS

A0A6J1C8D9 nucleolar protein 583.4e-1674.75Show/hide
Query:  MGETSEEKHE----EKVEKKEKKDKEKHE----GDEEK---KKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNA----PPPS
        MGE SEEKHE    EK EKKEKKDKEKHE    G+ EK   KKEKKKK+P DKKDPTKLRQKLEKLETKM+ LA+KKEEVLKLL EAEQNA    PPPS
Subjt:  MGETSEEKHE----EKVEKKEKKDKEKHE----GDEEK---KKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNA----PPPS

A0A6J1E7S6 protein PXR11.4e-1758.96Show/hide
Query:  LQTNNCTTIYSVCLQFCHKRATADTTSLQFQINIMGETSEEKHEEKVEKKE-KKDKEKHEGDEE-----------------KKKEKKKKDPADKKDPTKL
        L  NNC TI+   +QF        T         MG TSEEKHE KVEKKE KKDKEKHE +E+                 +KKEKKKKDPAD KDP KL
Subjt:  LQTNNCTTIYSVCLQFCHKRATADTTSLQFQINIMGETSEEKHEEKVEKKE-KKDKEKHEGDEE-----------------KKKEKKKKDPADKKDPTKL

Query:  RQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPP
        RQKLEKLE KMQALAVKKEE+LKL+HEAEQNA P
Subjt:  RQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPP

A0A6J1K499 protein PXR16.9e-1771.29Show/hide
Query:  MGETSEEKHEEKVEKKEKKDKEK--------------HEGDEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQN---APPP
        MG  SEEKHE+KVEKKEKK +E+               EG E +KKEKK KDPADKKDPTKLRQKLEKLE KMQALAVKKEEVLKLLHEAEQN   APPP
Subjt:  MGETSEEKHEEKVEKKEKKDKEK--------------HEGDEEKKKEKKKKDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQN---APPP

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62750.1 unknown protein1.3e-0744.64Show/hide
Query:  ETSEEKHE--EKVEKKE-KKDKEK------------HEGDEEKKKEKKK-------KDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQ--
        +  EE+H   EK EKKE KKDK+K             EG++++KK KKK       K+P DKKDP KL+ KL+K+E K+QA+ +KK+E++KL+H+AEQ  
Subjt:  ETSEEKHE--EKVEKKE-KKDKEK------------HEGDEEKKKEKKK-------KDPADKKDPTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQ--

Query:  ------NAPPPS
              +APPP+
Subjt:  ------NAPPPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAAAAAAGGAATTACCAAGTCTTGTGGCTGAATTCTCGGCAACCCACATCAATTTCTGGCCATTGGGTTGCCATATTTATGTAGACGAGTTGCAGACCAATAA
TTGCACAACAATTTATTCAGTTTGCCTTCAATTCTGTCACAAAAGAGCAACTGCTGATACAACCTCTCTGCAATTTCAGATAAACATAATGGGAGAGACCTCAGAAGAGA
AGCACGAGGAAAAGGTTGAGAAGAAGGAGAAGAAAGATAAAGAGAAGCACGAAGGAGATGAAGAGAAAAAGAAGGAAAAGAAGAAGAAGGATCCTGCGGATAAGAAAGAC
CCAACAAAACTGAGACAGAAGCTGGAGAAGCTTGAAACCAAAATGCAGGCTTTGGCTGTGAAGAAAGAAGAGGTATTGAAACTGCTCCATGAAGCTGAACAGAATGCTCC
GCCTCCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAAAAAAGGAATTACCAAGTCTTGTGGCTGAATTCTCGGCAACCCACATCAATTTCTGGCCATTGGGTTGCCATATTTATGTAGACGAGTTGCAGACCAATAA
TTGCACAACAATTTATTCAGTTTGCCTTCAATTCTGTCACAAAAGAGCAACTGCTGATACAACCTCTCTGCAATTTCAGATAAACATAATGGGAGAGACCTCAGAAGAGA
AGCACGAGGAAAAGGTTGAGAAGAAGGAGAAGAAAGATAAAGAGAAGCACGAAGGAGATGAAGAGAAAAAGAAGGAAAAGAAGAAGAAGGATCCTGCGGATAAGAAAGAC
CCAACAAAACTGAGACAGAAGCTGGAGAAGCTTGAAACCAAAATGCAGGCTTTGGCTGTGAAGAAAGAAGAGGTATTGAAACTGCTCCATGAAGCTGAACAGAATGCTCC
GCCTCCCTCTTGA
Protein sequenceShow/hide protein sequence
MEKKKELPSLVAEFSATHINFWPLGCHIYVDELQTNNCTTIYSVCLQFCHKRATADTTSLQFQINIMGETSEEKHEEKVEKKEKKDKEKHEGDEEKKKEKKKKDPADKKD
PTKLRQKLEKLETKMQALAVKKEEVLKLLHEAEQNAPPPS