CuGenDBv2

Gene ID	Lag0024469
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	D-ribose-binding periplasmic protein
Genome location	chr10:3333280..3333959
RNA-Seq Expression	Lag0024469
Synteny	Lag0024469
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584235.1 hypothetical protein SDJN03_20167, partial [Cucurbita argyrosperma subsp. sororia]

7.5e-67

80.92

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDRFYWPVNA EIMKSNPGHYVALLISTKIC S++T+    RRRH   QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS
        VT QDVLQGL+AKQEAK+K+NS+DFE   GNLEKGSEGE NQ MKCE+NR VS+AAKSR WQPSLQSISE GS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS

XP_004152463.1 uncharacterized protein LOC101220404 [Cucumis sativus]

3.4e-67

79.89

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDR YWPVNA EIMK+NPGHYVALLISTK+C SETTS+HHRRR +D  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS
        VTTQDVLQGL+AKQEAK K+N L+FE   GN EKGSEGE NQ MK ERNR       VSTAAKSR WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS

XP_008438114.1 PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo]

3.4e-67

79.89

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDR YWPVNA EIMK+NPGHYVALLISTK+C SETTS+HHRRR ++  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS
        VTTQDVLQGL+AKQEAK K+N LDFE   GN EKGSEGE NQ MK ERNR       VSTAAKSR WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS

XP_022923864.1 uncharacterized protein LOC111431455 [Cucurbita moschata]

3.7e-66

81.5

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDRFYWPVNA EIMKSNPGHYVALLISTKIC S++T+   RRR HD  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS
        VT QDVLQGL+AKQEAK+K+NS+DFE   GNLEKGSEGE NQ MKCE+NR VS+AAKSR WQPSLQSISE GS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS

XP_023519579.1 uncharacterized protein LOC111782953 [Cucurbita pepo subsp. pepo]

2.2e-66

82.08

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDRFYWPVNA EIMKSNPGHYVALLISTKIC S++T+   RRR HD  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS
        VT QDVLQGL+AKQEAK+K+NSLDFE   GNLEKGSEGE NQ MKCE+NR VS+AAKSR WQPSLQSISE GS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LU27 Uncharacterized protein

1.6e-67

79.89

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDR YWPVNA EIMK+NPGHYVALLISTK+C SETTS+HHRRR +D  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS
        VTTQDVLQGL+AKQEAK K+N L+FE   GN EKGSEGE NQ MK ERNR       VSTAAKSR WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS

A0A1S3AV95 uncharacterized protein LOC103483316

1.6e-67

79.89

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDR YWPVNA EIMK+NPGHYVALLISTK+C SETTS+HHRRR ++  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS
        VTTQDVLQGL+AKQEAK K+N LDFE   GN EKGSEGE NQ MK ERNR       VSTAAKSR WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS

A0A5D3BH89 Uncharacterized protein

1.6e-67

79.89

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDR YWPVNA EIMK+NPGHYVALLISTK+C SETTS+HHRRR ++  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS
        VTTQDVLQGL+AKQEAK K+N LDFE   GN EKGSEGE NQ MK ERNR       VSTAAKSR WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-------VSTAAKSRAWQPSLQSISEGGS

A0A6J1E7K0 uncharacterized protein LOC111431455

1.8e-66

81.5

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDRFYWPVNA EIMKSNPGHYVALLISTKIC S++T+   RRR HD  QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS
        VT QDVLQGL+AKQEAK+K+NS+DFE   GNLEKGSEGE NQ MKCE+NR VS+AAKSR WQPSLQSISE GS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS

A0A6J1KF34 uncharacterized protein LOC111495231

1.8e-66

80.92

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA+DTASLIIQHP GKVDRFYWPVNA EIMKSNPGHYVALLISTKIC S++T+    RRR    QTN ++ NSVRLTRIKLLKPTDSLVLGQIYRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS
        VT QDVLQGL+AKQEAK+K+NSLDFE   GNLEKGSEGE NQ MKCE+NR VS+AAKSR WQPSLQSISE GS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFE---GNLEKGSEGENNQVMKCERNR-VSTAAKSRAWQPSLQSISEGGS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10530.1 unknown protein

8.1e-27

40.46

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAV+ A L++QHP G +DR+Y  V+  E+M   PGHYV+L+I   +   E  +     +  D  Q       +VR TR++LL+PT++LVLG  YRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFEGNLEKGSEGENNQVMKCERNRV----STAAKSRAWQPSLQSISEGGS
        +T+Q+V++ LR K+ AK KK+ ++     +K S+ +  +  + ++ RV    ++  KS+ W+PSLQSISE  S
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFEGNLEKGSEGENNQVMKCERNRV----STAAKSRAWQPSLQSISEGGS

AT1G60010.1 unknown protein

1.9e-31

42.93

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLI--STKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIY
        MGNCQAVD A+L++QHP GK+DR+Y PV+ +EIM+  PGHYV+L+I    K   + TT++  +  R             VR TR+KLL+PT++LVLG  Y
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLI--STKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIY

Query:  RLVTTQDVLQGLRAKQEAKLKKNSLD---------FEGNLEKGSEGENNQVMKCERNRV----STAAKSRAWQPSLQSISEGGS
        RL+T+Q+V++ LRAK+ AK KK+  +          E  +++ S+   N   K E+ R     S +++S+ W+PSLQSISE  S
Subjt:  RLVTTQDVLQGLRAKQEAKLKKNSLD---------FEGNLEKGSEGENNQVMKCERNRV----STAAKSRAWQPSLQSISEGGS

AT5G50090.1 unknown protein

4.8e-35

47.7

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAVDTA ++IQHP GK ++   PV+A+ +MK NPGH V+LLIST   SS ++        H  P         +RLTRIKLL+PTD+LVLG +YRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFEGNLE-----KGSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS
        +TT++V++GL AK+ +KLKK S   +  LE       ++ +N   ++ ++     +  SR+WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFEGNLE-----KGSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS

AT5G50090.2 unknown protein

2.1e-35

50.29

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQAVDTA ++IQHP GK ++   PV+A+ +MK NPGH V+LLIST   SS ++        H  P         +RLTRIKLL+PTD+LVLG +YRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDFEGNLEK----GSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS
        +TT++V++GL AK+ +KLKK S   +  LE      S   +N+  + ER+R+     SR+WQPSLQSISEGGS
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDFEGNLEK----GSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS

AT5G62900.1 unknown protein

4.3e-28

39.89

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Query:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL
        MGNCQA + A+ +IQ P GK  RFY  VNA+E++KS+PGH+VALL+S+ +                    +G SL   R+TRIKLL+P+D+L+LG +YRL
Subjt:  MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRL

Query:  VTTQDVLQGLRAKQEAKLKKNSLDF--------------EGNLEKGSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS
        +++++V++G+RAK+  K+KK   +F              E   +K ++   ++  +   N      K RAWQPSLQSISE  S
Subjt:  VTTQDVLQGLRAKQEAKLKKNSLDF--------------EGNLEKGSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAAATTGCCAAGCCGTTGACACAGCATCTCTAATCATACAACACCCGACCGGAAAAGTCGACCGGTTTTACTGGCCAGTAAACGCCGCCGAGATCATGAAGTCAAA
TCCCGGCCACTACGTCGCCCTTCTCATCTCCACCAAAATCTGCTCATCGGAAACCACCTCCAGCCACCACCGCCGCCGCCGCCATGACCACCCCCAAACAAACGGCTCCA
GTCTCAACTCCGTCCGATTGACCCGAATCAAGCTTCTCAAGCCCACCGATTCCCTCGTTCTCGGCCAAATCTACCGCCTCGTCACAACCCAAGATGTTTTGCAGGGTTTG
AGAGCCAAACAGGAAGCGAAATTGAAGAAGAACTCGCTGGATTTCGAGGGAAATTTGGAGAAGGGATCTGAAGGGGAGAATAATCAGGTGATGAAATGTGAAAGAAACAG
AGTGTCTACAGCGGCAAAATCGAGAGCATGGCAGCCTTCTCTGCAAAGCATTTCTGAGGGTGGAAGCTGA

mRNA sequence

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Protein sequence

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MGNCQAVDTASLIIQHPTGKVDRFYWPVNAAEIMKSNPGHYVALLISTKICSSETTSSHHRRRRHDHPQTNGSSLNSVRLTRIKLLKPTDSLVLGQIYRLVTTQDVLQGL
RAKQEAKLKKNSLDFEGNLEKGSEGENNQVMKCERNRVSTAAKSRAWQPSLQSISEGGS

Lag0024469 (gene) of Sponge gourd (AG-4) v1 genome