CuGenDBv2

Gene ID	Lag0024476
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	1-deoxy-D-xylulose-5-phosphate synthase
Genome location	chr10:3377263..3381913
RNA-Seq Expression	Lag0024476
Synteny	Lag0024476
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7019828.1 hypothetical protein SDJN02_18792 [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-136

90.7

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALM+LSDG+FSPHH LIYTINAFFGPDIGSFS+WLSSVLGFSGSS+PDAIHHP+FYILILGLPLCLFY+WLSSVLL KGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLNRRQC  LISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAV+V+GFLCTCLIGGFVYINRVKSAKSI +QSYQSVKL++VVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWA+PRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKDLEIR LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

XP_004152468.1 uncharacterized protein LOC101221499 isoform X1 [Cucumis sativus]

2.7e-134

89.92

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMAL TLSDG+FSPHH L YTINAFFGPDIGSFSDWLSSVLGFS SS+PD IHHP+FYILILGLPLCLFYSWLSS LLHKGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLNRRQC LLISAGSFSHFFLDHLFEENGHSS YTWILSTGWW NRA INPDAV+V+GFLCTCLIGGFVYINRVKS KSIS+QSYQSVKL+VVVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWASPRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKD E + LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

XP_022137675.1 uncharacterized protein LOC111009054 [Momordica charantia]

9.7e-137

91.86

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALMTLSDG+FSPHH L+YTINAFFGPDIGSFS+WL+S+LGFSGSSIPDAIHHPLFYILILGLPLCLFYS+LSSVLL KG LD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLN RQC LLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAVV++GFLC CLIGGFVYINRVKSAKSI +QSYQSVKL+VVVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWASPRRPAVGEEADLGVLVFLA YFFLPHYLCIKSMHPKDLEIRQLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

XP_022923863.1 uncharacterized protein LOC111431454 [Cucurbita moschata]

9.7e-137

91.09

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALM+LSDG+FSPHH LIYTINAFFGPDIGSFS+WLSSVLGFSGSS+PDAIHHP+FYILILGLPLCLFY+WLSSVLL KGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLNRRQC LLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAV+V+GFLCTCLIGGFVYINRVKSAKSI +QSYQSVKL++VVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWA+PRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKDLEIR LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

XP_023519820.1 uncharacterized protein LOC111783152 [Cucurbita pepo subsp. pepo]

2.6e-137

91.47

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALM+LSDG+FSPHH LIYTINAFFGPDIGSFS+WLSSVLGFSGSS+PDAIHHP+FYILILGLPLCLFY+WLSSVLLHKGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLNRRQC LLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAV+VIGFLCTCLIGGFVYINRVKSAKSI +QSYQSVKL++VVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYW +PRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKDLEIR LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LR72 Uncharacterized protein

1.3e-134

89.92

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMAL TLSDG+FSPHH L YTINAFFGPDIGSFSDWLSSVLGFS SS+PD IHHP+FYILILGLPLCLFYSWLSS LLHKGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLNRRQC LLISAGSFSHFFLDHLFEENGHSS YTWILSTGWW NRA INPDAV+V+GFLCTCLIGGFVYINRVKS KSIS+QSYQSVKL+VVVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWASPRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKD E + LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

A0A1S3AWH9 uncharacterized protein LOC103483387 isoform X1

3.6e-129

86.82

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMAL TL+DG+FSPHH L Y+INAFFGPDIGSFSDWLSSVLGF  SS+PDAIHHP+FYILILGLPLCLFYSWLSS LL KGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
         GVSLNRRQC LLISAGSFSHFFLDHLFEENGHSS YTWILSTGWW NRA INPDAV V+GFLC CLIGGFVYINRVKS KSIS+Q +QSVKL+VVVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWASPRRPAVGEEAD GVLVFL  YFFLPHYLCIKSM PKD E + LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

A0A6J1C7B1 uncharacterized protein LOC111009054

4.7e-137

91.86

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALMTLSDG+FSPHH L+YTINAFFGPDIGSFS+WL+S+LGFSGSSIPDAIHHPLFYILILGLPLCLFYS+LSSVLL KG LD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLN RQC LLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAVV++GFLC CLIGGFVYINRVKSAKSI +QSYQSVKL+VVVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWASPRRPAVGEEADLGVLVFLA YFFLPHYLCIKSMHPKDLEIRQLPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

A0A6J1EAR6 uncharacterized protein LOC111431454

4.7e-137

91.09

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALM+LSDG+FSPHH LIYTINAFFGPDIGSFS+WLSSVLGFSGSS+PDAIHHP+FYILILGLPLCLFY+WLSSVLL KGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGVSLNRRQC LLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAV+V+GFLCTCLIGGFVYINRVKSAKSI +QSYQSVKL++VVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWA+PRRPAVGEEADLGVLVFL  YFFLPHYLCIKSM PKDLEIR LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

A0A6J1KN89 uncharacterized protein LOC111495033

2.2e-134

89.15

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Query:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV
        MPGPGPHMLYAMGSGMALM+LSDG+FSPHH LIYTINAFFGPDIGSFS+WLSSVLGFSGSS+PDAIHHP+FYILILGLPLCLFY+WLSS LL KGLLD V
Subjt:  MPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGFSGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPV

Query:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL
        FGV LN+ QC LLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWW NRA INPDAV+V+GFLCTCLIGGFVYINRVKSAKSI +QSYQSVKL++VVATL
Subjt:  FGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCLIGGFVYINRVKSAKSISRQSYQSVKLLVVVATL

Query:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL
        YSMWCASQIYWA+PRRPA GEEADLGVLVFL  YFFLPHYLCIKSM PKDLEIR LPL
Subjt:  YSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATCTGGTGCTTCGCAGGCAGAATGAGACAGTACAAAAAGGTGGGGCCAGGGATGAGCTGGCAGTCGGAGGATGTGGTTAGAAAAAGAGGCGATGATTTGGGGATAAT
TGTGAAGATCGGAAACTTTGGTACCGGCGGTGATCGTCGAGACGGAACCATGCCCGGACCTGGCCCTCACATGCTCTACGCCATGGGCTCAGGCATGGCTCTGATGACTC
TCAGCGACGGCAAATTCAGCCCTCACCACAACCTCATCTACACCATCAACGCCTTCTTCGGCCCCGACATCGGCTCCTTCTCCGATTGGCTATCTTCTGTTCTCGGCTTC
TCAGGATCTTCAATTCCCGATGCGATCCACCACCCCTTGTTCTACATTCTCATTCTAGGTCTTCCTCTCTGCCTCTTCTACTCCTGGCTCTCCTCTGTTCTACTTCACAA
GGGGCTTCTCGACCCCGTCTTCGGGGTTTCTCTTAATAGGAGGCAATGCTTCTTGTTGATTTCAGCCGGTTCTTTTTCACACTTCTTCCTTGATCATTTATTTGAGGAAA
ACGGGCATTCGTCGATGTACACTTGGATACTGAGCACTGGTTGGTGGGTGAACCGAGCAGCAATCAACCCAGATGCTGTTGTGGTTATTGGATTCTTGTGCACTTGCTTA
ATTGGCGGCTTTGTTTACATTAACAGAGTGAAGTCTGCAAAGTCCATTTCGAGACAATCATATCAGTCGGTAAAGCTTCTTGTAGTAGTAGCTACCCTGTATTCTATGTG
GTGTGCAAGCCAGATATACTGGGCTAGCCCCCGTCGACCAGCGGTCGGTGAAGAGGCCGACCTTGGAGTTCTAGTGTTTCTGGCGGCCTATTTTTTTCTTCCTCATTATC
TTTGTATAAAGTCTATGCACCCAAAAGATCTTGAAATCAGACAACTCCCATTGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MIWCFAGRMRQYKKVGPGMSWQSEDVVRKRGDDLGIIVKIGNFGTGGDRRDGTMPGPGPHMLYAMGSGMALMTLSDGKFSPHHNLIYTINAFFGPDIGSFSDWLSSVLGF
SGSSIPDAIHHPLFYILILGLPLCLFYSWLSSVLLHKGLLDPVFGVSLNRRQCFLLISAGSFSHFFLDHLFEENGHSSMYTWILSTGWWVNRAAINPDAVVVIGFLCTCL
IGGFVYINRVKSAKSISRQSYQSVKLLVVVATLYSMWCASQIYWASPRRPAVGEEADLGVLVFLAAYFFLPHYLCIKSMHPKDLEIRQLPL

Lag0024476 (gene) of Sponge gourd (AG-4) v1 genome