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Lag0024549 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024549
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr10:3858977..3859910
RNA-Seq ExpressionLag0024549
SyntenyLag0024549
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]1.7e-1339.17Show/hide
Query:  YLRDAQYKSSMNASRARDVTWFMSNIGDGMASDICVVADHCEADSHAGNAMHL-----QDGNHVNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELAL
        Y +D      +     +DV+W M  +     +D+ ++ D   A +  GN  ++     +  +   +   CRP DVINYM+  +GVNISYDKAWRG E+AL
Subjt:  YLRDAQYKSSMNASRARDVTWFMSNIGDGMASDICVVADHCEADSHAGNAMHL-----QDGNHVNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELAL

Query:  TAIRGSPEASYALISAFSAA
         +IRG+P+ SYA++SAFS A
Subjt:  TAIRGSPEASYALISAFSAA

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]1.3e-1370.18Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        +NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++SAFS A
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.7e-1371.43Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++SAFS A
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]1.8e-1269.64Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        NDKV CRP DVINYM+  + VNISYDKAW G E+AL +IRG+PE SYA++SAFS A
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]6.3e-1368.42Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        +NDK  CRP DVINYM+  + VNISYDKAWRG E+AL +IRG+PE SYA++SAFS A
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

TrEMBL top hitse value%identityAlignment
A0A1S4E392 uncharacterized protein LOC1079918243.1e-1368.42Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        +NDK  CRP DVINYM+  + VNISYDKAWRG E+AL +IRG+PE SYA++SAFS A
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

A0A5A7TC03 ZnF_PMZ domain-containing protein8.1e-1439.17Show/hide
Query:  YLRDAQYKSSMNASRARDVTWFMSNIGDGMASDICVVADHCEADSHAGNAMHL-----QDGNHVNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELAL
        Y +D      +     +DV+W M  +     +D+ ++ D   A +  GN  ++     +  +   +   CRP DVINYM+  +GVNISYDKAWRG E+AL
Subjt:  YLRDAQYKSSMNASRARDVTWFMSNIGDGMASDICVVADHCEADSHAGNAMHL-----QDGNHVNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELAL

Query:  TAIRGSPEASYALISAFSAA
         +IRG+P+ SYA++SAFS A
Subjt:  TAIRGSPEASYALISAFSAA

A0A5A7V1Z6 CCHC-type domain-containing protein6.2e-1470.18Show/hide
Query:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        +NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++SAFS A
Subjt:  VNDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like8.9e-1367.86Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +I+G+PE SYA++ AFS A
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

A0A5D3E198 MuDRA-like transposase8.1e-1471.43Show/hide
Query:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA
        NDK  CRP DVINYM+  +GVNISYDKAWRG E+AL +IRG+PE SYA++SAFS A
Subjt:  NDKVQCRPRDVINYMRRKNGVNISYDKAWRGWELALTAIRGSPEASYALISAFSAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTGGTTCTATTCAATGGGAGATGAGATGAAAACAATCGGTACAATGGGTTTAAGTCTGACAGTGTGCCAGTACTTGAGGGATGCACAATACAAGAGTTCAATGAA
TGCATCCAGAGCAAGGGATGTTACTTGGTTCATGTCCAACATTGGCGATGGAATGGCTAGCGACATATGCGTTGTGGCTGACCACTGTGAGGCAGATTCACATGCTGGGA
ATGCAATGCATTTACAAGATGGAAATCACGTAAACGACAAGGTCCAGTGTCGCCCCCGTGATGTTATTAACTATATGAGGAGGAAAAACGGTGTCAACATCAGTTATGAC
AAGGCATGGAGGGGTTGGGAACTTGCACTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCTCTGCTTTCTCCGCTGCTGATCGAGAAAAACCCAGGCT
GACGCAAGGAGGATTTTGGGGAGTTGGATTTGTCTACATTCTTTTGGTTCTTCATTTAATTCTTGTGTATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTGGTTCTATTCAATGGGAGATGAGATGAAAACAATCGGTACAATGGGTTTAAGTCTGACAGTGTGCCAGTACTTGAGGGATGCACAATACAAGAGTTCAATGAA
TGCATCCAGAGCAAGGGATGTTACTTGGTTCATGTCCAACATTGGCGATGGAATGGCTAGCGACATATGCGTTGTGGCTGACCACTGTGAGGCAGATTCACATGCTGGGA
ATGCAATGCATTTACAAGATGGAAATCACGTAAACGACAAGGTCCAGTGTCGCCCCCGTGATGTTATTAACTATATGAGGAGGAAAAACGGTGTCAACATCAGTTATGAC
AAGGCATGGAGGGGTTGGGAACTTGCACTTACTGCCATCAGAGGGTCACCCGAAGCGTCGTATGCACTAATCTCTGCTTTCTCCGCTGCTGATCGAGAAAAACCCAGGCT
GACGCAAGGAGGATTTTGGGGAGTTGGATTTGTCTACATTCTTTTGGTTCTTCATTTAATTCTTGTGTATTTTTAA
Protein sequenceShow/hide protein sequence
MWWFYSMGDEMKTIGTMGLSLTVCQYLRDAQYKSSMNASRARDVTWFMSNIGDGMASDICVVADHCEADSHAGNAMHLQDGNHVNDKVQCRPRDVINYMRRKNGVNISYD
KAWRGWELALTAIRGSPEASYALISAFSAADREKPRLTQGGFWGVGFVYILLVLHLILVYF