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Lag0024573 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024573
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpectin methylesterase 44
Genome locationchr10:4066923..4071430
RNA-Seq ExpressionLag0024573
SyntenyLag0024573
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33220.1 pectin methylesterase 443.1e-0445.65Show/hide
Query:  WITGDTGFGTMQSSTFKFNNRGPGADLSGRVKVKWPGFHVLNNPDQ
        W+  +  F        +F N GPG+ LS R  VKWPG+HV NN DQ
Subjt:  WITGDTGFGTMQSSTFKFNNRGPGADLSGRVKVKWPGFHVLNNPDQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCGAAAACGGTCATTGTGGATAACAGGTGACACGGGTTTTGGAACCATGCAATCCTCCACTTTCAAATTTAACAATAGAGGTCCAGGAGCTGATTTAAGTGGAAG
AGTCAAAGTCAAGTGGCCAGGATTTCATGTGCTAAACAATCCAGACCAGGAAGCAACCCAGAGGAAGACCAACCAACGGGCCGGGACAAAATGGCCCGACCCATATGGTC
GGTATCGACCCAAGGCCGAGGTCGAGTTCGTTTGCCTCCGCTCGATCCCTGCCGCCTCTAGCCGCCCCGGTCCAGCCTGGTTCGTCCCGAAACGCCTTCAAACCCTAGGA
GCACGAGCAGCATCAGAGGCGGTGTGGCAAGTACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGTCACGTCTTCCCCCGCTCTCAAACAAATTTACCGTTGGTGGCAC
GGGAAGGTCAGTTCGTGACTCCGAGGATTCTTTAATTATGGTAGGCTGCAAGAAAGTCAAGGAGAGATGGTCGGTCAATGTTTTGGAAACTATGGCTATTAAAGAATGTC
TCTTAAATTACCTGCGTTGGCGACTTTTGATCGTTGAATCGGATTCTGCTGGAAATTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCGAAAACGGTCATTGTGGATAACAGGTGACACGGGTTTTGGAACCATGCAATCCTCCACTTTCAAATTTAACAATAGAGGTCCAGGAGCTGATTTAAGTGGAAG
AGTCAAAGTCAAGTGGCCAGGATTTCATGTGCTAAACAATCCAGACCAGGAAGCAACCCAGAGGAAGACCAACCAACGGGCCGGGACAAAATGGCCCGACCCATATGGTC
GGTATCGACCCAAGGCCGAGGTCGAGTTCGTTTGCCTCCGCTCGATCCCTGCCGCCTCTAGCCGCCCCGGTCCAGCCTGGTTCGTCCCGAAACGCCTTCAAACCCTAGGA
GCACGAGCAGCATCAGAGGCGGTGTGGCAAGTACCACACCGGTGTGCAGGTTTACTCTTTTGCAGGTCACGTCTTCCCCCGCTCTCAAACAAATTTACCGTTGGTGGCAC
GGGAAGGTCAGTTCGTGACTCCGAGGATTCTTTAATTATGGTAGGCTGCAAGAAAGTCAAGGAGAGATGGTCGGTCAATGTTTTGGAAACTATGGCTATTAAAGAATGTC
TCTTAAATTACCTGCGTTGGCGACTTTTGATCGTTGAATCGGATTCTGCTGGAAATTATTAA
Protein sequenceShow/hide protein sequence
MSRKRSLWITGDTGFGTMQSSTFKFNNRGPGADLSGRVKVKWPGFHVLNNPDQEATQRKTNQRAGTKWPDPYGRYRPKAEVEFVCLRSIPAASSRPGPAWFVPKRLQTLG
ARAASEAVWQVPHRCAGLLFCRSRLPPLSNKFTVGGTGRSVRDSEDSLIMVGCKKVKERWSVNVLETMAIKECLLNYLRWRLLIVESDSAGNY