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Lag0024583 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024583
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRPM1-interacting protein 4 (RIN4) family protein
Genome locationchr10:4183463..4183873
RNA-Seq ExpressionLag0024583
SyntenyLag0024583
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152507.2 protein NOI4 [Cucumis sativus]8.3e-2479.71Show/hide
Query:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +  QDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTGTAANMV  ++NE  +NNE YPQYPPPK
Subjt:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]3.7e-2479.71Show/hide
Query:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +  QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  ++NE  +NNE YPQYPPPK
Subjt:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

XP_022137179.1 uncharacterized protein LOC111008714 isoform X1 [Momordica charantia]1.2e-2577.03Show/hide
Query:  VDIIALLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +++++  +QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQ+NE+ YNNE +PQY PPK
Subjt:  VDIIALLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

XP_022137180.1 uncharacterized protein LOC111008714 isoform X2 [Momordica charantia]2.2e-2484.85Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQ+NE+ YNNE +PQY PPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

XP_022954832.1 RPM1-interacting protein 4-like [Cucurbita moschata]2.2e-2486.36Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ ANMVS Q NE  YNNE +PQ PPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

TrEMBL top hitse value%identityAlignment
A0A0A0LRE5 AvrRpt-cleavage domain-containing protein4.0e-2479.71Show/hide
Query:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +  QDKGR LPKFG+WDVNNPASAEGFTVIFNKAR+EKKTTGTAANMV  ++NE  +NNE YPQYPPPK
Subjt:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

A0A1S3AZ04 RPM1-interacting protein 4 isoform X11.8e-2479.71Show/hide
Query:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +  QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG AANMV  ++NE  +NNE YPQYPPPK
Subjt:  LLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

A0A6J1C5Z3 uncharacterized protein LOC111008714 isoform X21.1e-2484.85Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +D+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQ+NE+ YNNE +PQY PPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

A0A6J1C6I4 uncharacterized protein LOC111008714 isoform X15.6e-2677.03Show/hide
Query:  VDIIALLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        +++++  +QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAA+ VSPQ+NE+ YNNE +PQY PPK
Subjt:  VDIIALLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

A0A6J1GRZ4 RPM1-interacting protein 4-like1.1e-2486.36Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ ANMVS Q NE  YNNE +PQ PPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.9e-1658.23Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPPK--VCSIEDPRIN
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G      SP K+   +  +  G P  P PK  +C ++ P ++
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPPK--VCSIEDPRIN

Q8GYN5 RPM1-interacting protein 41.1e-0555.56Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT
        +K   +PKFG+WD NNP+SA+G+T IFNK R+E+ +
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein8.9e-1664.62Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK
        DKGRPLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK  G +    SP K+E  YN  G     P K
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPK

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.5e-1565.15Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPP
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G      SP K+   +  +  G P  P P
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPP

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.2e-1564.18Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPP
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G      SP K+   +  +  G P  P P
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPP

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.1e-1757.5Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPPK--VCSIEDPRIN
        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G      SP K+   +  +  G P  P PK  +C ++ P ++
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDY--NNEGYPQYPPPK--VCSIEDPRIN

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein6.1e-1761.64Show/hide
Query:  LQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGTAAN-MVSPQKNE-TDYNNEGYPQYPPPK
        + ++KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   +G   N +VSPQ+N+ +D NN    Q P  K
Subjt:  LQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGTAAN-MVSPQKNE-TDYNNEGYPQYPPPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTAGCATGCTTAATAAAGTCTCATGTAGATATCATTGCATTGTTGCAGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTCAATAATCCTGC
ATCTGCAGAAGGATTTACGGTAATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAACTGCTGCTAATATGGTTTCACCACAAAAAAATGAAACTGACTATAACA
ATGAAGGTTATCCTCAGTATCCTCCACCGAAGGTCTGTTCAATAGAAGACCCGAGAATCAATTTCGTTCTAGATATCTCAAGTCTAATCTATTTTTTGGTATTTGGATGC
AGAAGAGGTGGTTTTGCTGTGTTTGAAGCCACAGTGGTTTCAGGATCTAGAATTTGTGTAATCTATTGTGAAAGTGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTAGCATGCTTAATAAAGTCTCATGTAGATATCATTGCATTGTTGCAGCAGGACAAGGGTCGTCCATTGCCAAAGTTTGGTGAATGGGATGTCAATAATCCTGC
ATCTGCAGAAGGATTTACGGTAATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAACTGCTGCTAATATGGTTTCACCACAAAAAAATGAAACTGACTATAACA
ATGAAGGTTATCCTCAGTATCCTCCACCGAAGGTCTGTTCAATAGAAGACCCGAGAATCAATTTCGTTCTAGATATCTCAAGTCTAATCTATTTTTTGGTATTTGGATGC
AGAAGAGGTGGTTTTGCTGTGTTTGAAGCCACAGTGGTTTCAGGATCTAGAATTTGTGTAATCTATTGTGAAAGTGCGTAA
Protein sequenceShow/hide protein sequence
MLVACLIKSHVDIIALLQQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAANMVSPQKNETDYNNEGYPQYPPPKVCSIEDPRINFVLDISSLIYFLVFGC
RRGGFAVFEATVVSGSRICVIYCESA