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Lag0024603 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024603
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description4-coumarate-CoA ligase
Genome locationchr10:4322472..4323203
RNA-Seq ExpressionLag0024603
SyntenyLag0024603
Gene Ontology termsGO:0016405 - CoA-ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33954.1 4-coumarate-CoA ligase [Cucumis melo subsp. melo]3.3e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

KAA0055316.1 4-coumarate-CoA ligase [Cucumis melo var. makuwa]3.3e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

TYJ99241.1 4-coumarate-CoA ligase [Cucumis melo var. makuwa]3.3e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

XP_016899600.1 PREDICTED: 4-coumarate--CoA ligase-like 9 [Cucumis melo]3.3e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

XP_023542622.1 4-coumarate--CoA ligase-like 9 [Cucurbita pepo subsp. pepo]1.6e-2275.32Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM++F FE MLRAVEK+ V +IPVSPPL+VA+ KSELV++YDLSSLQIL  GGAPLGKEV+DKFHE  PNVEI+Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

TrEMBL top hitse value%identityAlignment
A0A0A0LTS5 Uncharacterized protein1.4e-2276.62Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEK+ V +IPVSPPL+VA+AKSELV +YDLSSLQ+L  GGAPLGKEVIDKFH+ LP VEI+Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

A0A1S4DV63 4-coumarate--CoA ligase-like 91.6e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

A0A5A7UM03 4-coumarate-CoA ligase1.6e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

A0A5D3BKJ5 4-coumarate-CoA ligase1.6e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

E5GBV5 4-coumarate-CoA ligase1.6e-2377.92Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVLM+RF FE MLRAVEKF V++IPVSPPL+VA+AKS+LV++YDLSSLQIL  GGAPLGKEVIDKFH+ LP+VEI Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

SwissProt top hitse value%identityAlignment
A0A2H5AIX5 4-coumarate-CoA ligase 12.3e-1141.56Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        +VLM++F    ++  VEK+ V   P  PP++V + K+E V  YDLSS++++  G AP+GKE+ +K  E LPN ++ Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

M4IQR7 Probable CoA ligase CCL51.0e-1144.3Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAK--SELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        +V++ +F    ML A+EK+   ++P+ PP+++A+ K  + + ++YDLSSLQ +  GGAPL KEVI+ F E  P V ILQ
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAK--SELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

P31686 4-coumarate--CoA ligase 1 (Fragment)6.7e-1141.56Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        ++LM +F+  ++L  + K  V   PV PP+++AI+KS  + +YDLSS+++L+ GGAPLGKE+ D      PN ++ Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

Q7F1X5 4-coumarate--CoA ligase-like 55.0e-1450Show/hide
Query:  VLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        VLM+RF+F A LRA+E++ V  +P +PP++VA+ K E     DLSSL ++  GGAPLG+EV ++F    PNVE++Q
Subjt:  VLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

Q84P23 4-coumarate--CoA ligase-like 91.1e-1655.84Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVL+ RF  EAM +AVEK+ V  +PVSPPL+VA+ KSEL  +YDL SL+ L  GGAPLGK++ ++F +  P+V+I+Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

Arabidopsis top hitse value%identityAlignment
AT1G20490.1 AMP-dependent synthetase and ligase family protein2.4e-1141.77Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAI--AKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        +V+++RF  + M++AVEK+    + ++PP++VA+     +L ++YDL+SL+ +  GGAPL KEV+D F E  P V I Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAI--AKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

AT1G51680.1 4-coumarate:CoA ligase 12.0e-1036.36Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        +++M +F    +L  +++  V   P+ PP+++AIAKS    +YDLSS+++++ G APLGKE+ D  +   PN ++ Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

AT1G51680.2 4-coumarate:CoA ligase 12.0e-1036.36Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        +++M +F    +L  +++  V   P+ PP+++AIAKS    +YDLSS+++++ G APLGKE+ D  +   PN ++ Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

AT4G05160.1 AMP-dependent synthetase and ligase family protein6.2e-1241.56Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LV M RF  E +L+ +EKF V  + V PP+ +A++K  +V ++DLSSL+ +  G APLGK+++++    +PNV ++Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ

AT5G63380.1 AMP-dependent synthetase and ligase family protein7.6e-1855.84Show/hide
Query:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ
        LVL+ RF  EAM +AVEK+ V  +PVSPPL+VA+ KSEL  +YDL SL+ L  GGAPLGK++ ++F +  P+V+I+Q
Subjt:  LVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGKEVIDKFHETLPNVEILQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGGGATATTCACCTCCGAATCGCTAATCTGGTAGCGAACCACAAAGAGAGAGCGTCTTCTTCTCGAATTACTTTCAGGAACACCAGCGCTATAATTGCGCGGAG
CACCCTCTGGGAATCCCTCACCGAACCCTCACCGAAATGGTTGGTTCTGATGCAGAGATTCAACTTCGAGGCGATGTTGAGAGCGGTGGAGAAGTTCTGGGTCGTGTTCA
TCCCGGTTTCTCCACCGCTGATGGTGGCGATTGCGAAGTCGGAGCTGGTGTCGGAATACGATCTCAGTTCTCTTCAAATTTTGGAAGGCGGCGGCGCTCCCCTTGGGAAA
GAAGTCATCGATAAATTCCATGAGACGTTGCCCAATGTTGAAATTTTGCAGGTTAGCAATCAACACTTCTGTTTATTAATCTGTTTACCCCAGATAATATTAAATACAAA
TTCACCGCCAAAAGTTGGAGATTCACCACGTGGAAATGGCCAGATCCCACCATATCATCATCTTCAATTTACACTTCTGCAGTTCCCAATGTTGGCACGGAACTCGATAG
ATGGTGGATTGGGTTGTTATCTTTGTTGCGTCATTGGAGATTATCTTGCATTGGAATACGCCATGCACCTCCATAACGATAATCCTCAACGTTCCTATCCTACCCGAAAT
GACCCAGAGAAGTGTGCTGCATATTTATACAGCACCTTAGCTCTACAAAGGCATCGAATAGCTTTCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACGGGATATTCACCTCCGAATCGCTAATCTGGTAGCGAACCACAAAGAGAGAGCGTCTTCTTCTCGAATTACTTTCAGGAACACCAGCGCTATAATTGCGCGGAG
CACCCTCTGGGAATCCCTCACCGAACCCTCACCGAAATGGTTGGTTCTGATGCAGAGATTCAACTTCGAGGCGATGTTGAGAGCGGTGGAGAAGTTCTGGGTCGTGTTCA
TCCCGGTTTCTCCACCGCTGATGGTGGCGATTGCGAAGTCGGAGCTGGTGTCGGAATACGATCTCAGTTCTCTTCAAATTTTGGAAGGCGGCGGCGCTCCCCTTGGGAAA
GAAGTCATCGATAAATTCCATGAGACGTTGCCCAATGTTGAAATTTTGCAGGTTAGCAATCAACACTTCTGTTTATTAATCTGTTTACCCCAGATAATATTAAATACAAA
TTCACCGCCAAAAGTTGGAGATTCACCACGTGGAAATGGCCAGATCCCACCATATCATCATCTTCAATTTACACTTCTGCAGTTCCCAATGTTGGCACGGAACTCGATAG
ATGGTGGATTGGGTTGTTATCTTTGTTGCGTCATTGGAGATTATCTTGCATTGGAATACGCCATGCACCTCCATAACGATAATCCTCAACGTTCCTATCCTACCCGAAAT
GACCCAGAGAAGTGTGCTGCATATTTATACAGCACCTTAGCTCTACAAAGGCATCGAATAGCTTTCACTTGA
Protein sequenceShow/hide protein sequence
MERDIHLRIANLVANHKERASSSRITFRNTSAIIARSTLWESLTEPSPKWLVLMQRFNFEAMLRAVEKFWVVFIPVSPPLMVAIAKSELVSEYDLSSLQILEGGGAPLGK
EVIDKFHETLPNVEILQVSNQHFCLLICLPQIILNTNSPPKVGDSPRGNGQIPPYHHLQFTLLQFPMLARNSIDGGLGCYLCCVIGDYLALEYAMHLHNDNPQRSYPTRN
DPEKCAAYLYSTLALQRHRIAFT