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Lag0024714 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024714
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr10:5193575..5193967
RNA-Seq ExpressionLag0024714
SyntenyLag0024714
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137641.1 pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus]5.3e-0445.35Show/hide
Query:  MKIHRFSLSSALNIKRPLYLWNLTNRSSVNGGFFDRQSSQNLLIYAALWNSWQQFSLFLSSLRLVPILLQSVMAQCSTLTSSMSGS
        M+IHRFS SS L  K+PLYLWNLT RSSVNGGFF    +Q+L  Y+ + +S    + F       P+LL++    C+ L S   G+
Subjt:  MKIHRFSLSSALNIKRPLYLWNLTNRSSVNGGFFDRQSSQNLLIYAALWNSWQQFSLFLSSLRLVPILLQSVMAQCSTLTSSMSGS
TrEMBL top hitse value%identityAlignment
A0A0A0LT91 Uncharacterized protein2.6e-0445.35Show/hide
Query:  MKIHRFSLSSALNIKRPLYLWNLTNRSSVNGGFFDRQSSQNLLIYAALWNSWQQFSLFLSSLRLVPILLQSVMAQCSTLTSSMSGS
        M+IHRFS SS L  K+PLYLWNLT RSSVNGGFF    +Q+L  Y+ + +S    + F       P+LL++    C+ L S   G+
Subjt:  MKIHRFSLSSALNIKRPLYLWNLTNRSSVNGGFFDRQSSQNLLIYAALWNSWQQFSLFLSSLRLVPILLQSVMAQCSTLTSSMSGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTCATAGGTTCTCTCTATCTTCTGCATTGAATATTAAAAGACCTCTTTATCTATGGAACTTGACTAATCGAAGTTCCGTCAATGGTGGATTCTTCGATCGCCA
AAGCTCTCAAAACCTACTCATTTATGCGGCACTCTGGAATTCATGGCAACAATTTTCACTTTTCCTCTCCTCCTTAAGGCTTGTGCCAATCTTGCTTCAATCGGTGATGG
CACAATGCTCCACACTCACCTCATCCATGTCGGGTTCGAATAAGACATCTTTGTTCAAACCTCGCTCGTCAACATGTACTCAAAGTGCTTTGACTTGGCTTCTGCATGCC
AAGTGTTCAACGAAATGTCTACAAGAAGTGTCATCTCGTAGTTTCGTGTTAATGAACCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTCATAGGTTCTCTCTATCTTCTGCATTGAATATTAAAAGACCTCTTTATCTATGGAACTTGACTAATCGAAGTTCCGTCAATGGTGGATTCTTCGATCGCCA
AAGCTCTCAAAACCTACTCATTTATGCGGCACTCTGGAATTCATGGCAACAATTTTCACTTTTCCTCTCCTCCTTAAGGCTTGTGCCAATCTTGCTTCAATCGGTGATGG
CACAATGCTCCACACTCACCTCATCCATGTCGGGTTCGAATAAGACATCTTTGTTCAAACCTCGCTCGTCAACATGTACTCAAAGTGCTTTGACTTGGCTTCTGCATGCC
AAGTGTTCAACGAAATGTCTACAAGAAGTGTCATCTCGTAGTTTCGTGTTAATGAACCGTTAA
Protein sequenceShow/hide protein sequence
MKIHRFSLSSALNIKRPLYLWNLTNRSSVNGGFFDRQSSQNLLIYAALWNSWQQFSLFLSSLRLVPILLQSVMAQCSTLTSSMSGSNKTSLFKPRSSTCTQSALTWLLHA
KCSTKCLQEVSSRSFVLMNR