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Lag0024745 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024745
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPatatin
Genome locationchr10:5398209..5398598
RNA-Seq ExpressionLag0024745
SyntenyLag0024745
Gene Ontology termsGO:0000162 - tryptophan biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584077.1 hypothetical protein SDJN03_20009, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4484.21Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-SAFDVSESNRLNKISGF
        MAATA VAIGTRGT+GSL+KKEIDYFAKIELERCSS SSQRPQ PDMA+S  SSSPPTFW+SVMSWRRKKKR+ +RFV KIC SAFDVSESN++NKISGF
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-SAFDVSESNRLNKISGF

Query:  SYTILQNDFHSLHM
        +YTILQN+FHSLHM
Subjt:  SYTILQNDFHSLHM

KAG7019678.1 hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-5283.85Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-S
        MQ NKPSTTFCKSH KMAATA VAIGTRGT+GSL+KKEIDYFAKIELERCSS SSQRPQ PDMA+S  SS PPTFW+SVMSWRRKKKR+ +RFV KIC S
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKIC-S

Query:  AFDVSESNRLNKISGFSYTILQNDFHSLHM
        AFDVSESN++NKISGF+YTILQN+FHSLHM
Subjt:  AFDVSESNRLNKISGFSYTILQNDFHSLHM

KGN64543.2 hypothetical protein Csa_013063 [Cucumis sativus]1.0e-3980.53Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGFS
        MAA APVAIGTRGT+GSLVKKEIDYFAKIELE  +S SSQR QGP+MASS   SSPPTFW S+MSWRRK K TSNRFV+K+CS FD S SNR+NKISG S
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGFS

Query:  YTILQNDFHSLHM
        YTILQNDFHSLHM
Subjt:  YTILQNDFHSLHM

XP_016898893.1 PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]1.2e-4079.65Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGFS
        MAATAPVAIGTRGT+GSL+KKEIDYFAKIELE  +S SSQR QGP+MASS   SSPPTFW S+MSWRRKKK TSNRF++K+CS FD S SNR+NKISG S
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGFS

Query:  YTILQNDFHSLHM
        YTILQNDFHSLH+
Subjt:  YTILQNDFHSLHM

XP_022140128.1 uncharacterized protein LOC111010862 [Momordica charantia]2.5e-4680Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS
        MQ +KPSTTFCK   +MAATAPVAIGTRGTVGSLVKKEIDYFAKIE ERCS        G DMASSS RSSSPPTFW++VMSWRRKKKR  NRF++KICS
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS

Query:  AFDVSESNRLNKISGFSYTILQNDFHSLHM
        AFDVS SNRLNKISGF+YTILQNDF+SLHM
Subjt:  AFDVSESNRLNKISGFSYTILQNDFHSLHM

TrEMBL top hitse value%identityAlignment
A0A0A0LX43 Uncharacterized protein6.0e-4678.29Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSA
        MQ NKP+ TF KSH  MAA APVAIGTRGT+GSLVKKEIDYFAKIELE  +S SSQR QGP+MASS   SSPPTFW S+MSWRRK K TSNRFV+K+CS 
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSA

Query:  FDVSESNRLNKISGFSYTILQNDFHSLHM
        FD S SNR+NKISG SYTILQNDFHSLHM
Subjt:  FDVSESNRLNKISGFSYTILQNDFHSLHM

A0A1S4DSE9 uncharacterized protein LOC1034854095.9e-4179.65Show/hide
Query:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGFS
        MAATAPVAIGTRGT+GSL+KKEIDYFAKIELE  +S SSQR QGP+MASS   SSPPTFW S+MSWRRKKK TSNRF++K+CS FD S SNR+NKISG S
Subjt:  MAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLNKISGFS

Query:  YTILQNDFHSLHM
        YTILQNDFHSLH+
Subjt:  YTILQNDFHSLHM

A0A5A7UTL1 Uncharacterized protein9.3e-3976.32Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSA
        MQ NKP+ TF KSH  MAATAPVAIGTRGT+GSL+KKEIDYFAKIELE  +S SSQR QGP+MASS   SSPPTFW S+MSWRRKKK TSNRF++K+CS 
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSA

Query:  FDVSESNRLNKISG
        FD S SNR+NKISG
Subjt:  FDVSESNRLNKISG

A0A5N6QB68 Uncharacterized protein5.7e-2857.38Show/hide
Query:  KPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDV
        K S T  K   KM A APVAIGTRGTVGSLV+KEI+YF KIE++RC SS   + Q  D+AS+S RS+S P+FW+ +M+W+RKK+R+S+  +  ICSA +V
Subjt:  KPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDV

Query:  SESNRLNKISGFSYTILQNDFH
        ++SNRLN+I G++Y IL+ND H
Subjt:  SESNRLNKISGFSYTILQNDFH

A0A6J1CHB1 uncharacterized protein LOC1110108621.2e-4680Show/hide
Query:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS
        MQ +KPSTTFCK   +MAATAPVAIGTRGTVGSLVKKEIDYFAKIE ERCS        G DMASSS RSSSPPTFW++VMSWRRKKKR  NRF++KICS
Subjt:  MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSS-RSSSPPTFWYSVMSWRRKKKRTSNRFVSKICS

Query:  AFDVSESNRLNKISGFSYTILQNDFHSLHM
        AFDVS SNRLNKISGF+YTILQNDF+SLHM
Subjt:  AFDVSESNRLNKISGFSYTILQNDFHSLHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein6.7e-1341.44Show/hide
Query:  APVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPD-----MASSSRSSSPPTFWYSVMSWRRKKKRT---SNRFVSKICSAFDVSESNRLNKI
        AP+AIGTRGT+GSLV+KEIDYF       C      R    +          RSSS    W+S   WR+KK++T     +F   +CSA +VS  NR   +
Subjt:  APVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPD-----MASSSRSSSPPTFWYSVMSWRRKKKRT---SNRFVSKICSAFDVSESNRLNKI

Query:  SGFSYTILQND
         GF+Y IL++D
Subjt:  SGFSYTILQND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACGTAATAAACCCAGCACCACATTCTGCAAATCCCATGTCAAAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAA
GGAAATTGATTACTTTGCCAAGATTGAGCTTGAAAGATGCAGCAGCAGCAGCTCACAGAGGCCTCAAGGACCTGATATGGCTTCTTCTAGCCGCAGCAGTTCCCCTCCCA
CTTTCTGGTACTCTGTAATGTCGTGGAGAAGGAAGAAGAAGCGAACCAGCAACCGTTTTGTCTCGAAAATTTGCTCGGCTTTCGATGTTTCAGAAAGCAATCGGCTGAAT
AAGATTTCTGGGTTCAGTTATACCATCCTTCAGAATGATTTCCACAGCTTGCACATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACGTAATAAACCCAGCACCACATTCTGCAAATCCCATGTCAAAATGGCTGCAACTGCTCCTGTTGCCATTGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAA
GGAAATTGATTACTTTGCCAAGATTGAGCTTGAAAGATGCAGCAGCAGCAGCTCACAGAGGCCTCAAGGACCTGATATGGCTTCTTCTAGCCGCAGCAGTTCCCCTCCCA
CTTTCTGGTACTCTGTAATGTCGTGGAGAAGGAAGAAGAAGCGAACCAGCAACCGTTTTGTCTCGAAAATTTGCTCGGCTTTCGATGTTTCAGAAAGCAATCGGCTGAAT
AAGATTTCTGGGTTCAGTTATACCATCCTTCAGAATGATTTCCACAGCTTGCACATGTAG
Protein sequenceShow/hide protein sequence
MQRNKPSTTFCKSHVKMAATAPVAIGTRGTVGSLVKKEIDYFAKIELERCSSSSSQRPQGPDMASSSRSSSPPTFWYSVMSWRRKKKRTSNRFVSKICSAFDVSESNRLN
KISGFSYTILQNDFHSLHM