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Lag0024753 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024753
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein VTE6, chloroplastic
Genome locationchr10:5459160..5464267
RNA-Seq ExpressionLag0024753
SyntenyLag0024753
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002794 - Protein of unknown function DUF92, TMEM19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137222.1 protein VTE6, chloroplastic isoform X1 [Cucumis sativus]1.2e-3497.53Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

XP_022142893.1 protein VTE6, chloroplastic isoform X1 [Momordica charantia]2.0e-3496.3Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL+FVGCLLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

XP_022142894.1 protein VTE6, chloroplastic isoform X2 [Momordica charantia]7.8e-3495.06Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL+FVGCLLG+
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

XP_031740533.1 protein VTE6, chloroplastic isoform X2 [Cucumis sativus]1.2e-3497.53Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

XP_038876750.1 protein VTE6, chloroplastic [Benincasa hispida]1.6e-3497.53Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFV CLLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

TrEMBL top hitse value%identityAlignment
A0A0A0KVG7 Uncharacterized protein5.8e-3597.53Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVT FKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

A0A6J1CMR6 protein VTE6, chloroplastic isoform X23.8e-3495.06Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL+FVGCLLG+
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

A0A6J1CPE4 protein VTE6, chloroplastic isoform X19.9e-3596.3Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIAL+FVGCLLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

A0A6J1FX48 protein VTE6, chloroplastic1.9e-3395.06Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD
        +KVGG+ FAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVG LLGD
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGD

A0A6J1J8Q4 protein VTE6, chloroplastic-like9.3e-3387.06Show/hide
Query:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGDDSDS
        + +GGEAF QLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTF++VPRGTEGAVSLEGTFAGLLAA  LAFVGCLLGD + S
Subjt:  SKVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGDDSDS

SwissProt top hitse value%identityAlignment
P73555 Uncharacterized membrane protein sll08756.2e-1865.28Show/hide
Query:  QLW-RLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG
        QLW  LG+VASF TKLSDT +SE+GKAYG+ T+L+TT + VPRGTEGAVS+EGT AG  A +ALA +G  +G
Subjt:  QLW-RLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG

Q58343 Uncharacterized membrane protein MJ09331.0e-0742.03Show/hide
Query:  LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGDD
        +G+++S     SDT SSE+G        L+TTF+VV +GT+GA+++ GT AG+L A  +   G LL  D
Subjt:  LGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGDD

Q9SYM0 Protein VTE6, chloroplastic1.7e-2878.48Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTFK+VPRGTEGA+SLEGT AGLLA+  LA VGC LG
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG

Arabidopsis top hitse value%identityAlignment
AT1G78620.1 Protein of unknown function DUF92, transmembrane1.2e-2978.48Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTFK+VPRGTEGA+SLEGT AGLLA+  LA VGC LG
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG

AT1G78620.2 Protein of unknown function DUF92, transmembrane1.2e-2978.48Show/hide
Query:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG
        +VGG AF+QL+RLGFV+SFCTK+SDTVSSEIGKAYG+ TYL TTFK+VPRGTEGA+SLEGT AGLLA+  LA VGC LG
Subjt:  KVGGEAFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCGGCAATTTGTTGAAGAAGAAGAATGAAGAAGTTGAAGAAGAGCTAGACGTTTTGATCGGGTATGAGGTTCAAATCGAGGATCATTTTCGGATCCCTGATTG
GGGACGAGACGGGGATGGAGATGGTGATGGATCCAACAATTCAAGTTCCTCAGTGTTAGAGTCTGAATCCTGCAAGACCACATTAGGACAAAAATTGAGCAATCTGTTAA
TACTTAAGCCGATAGTCATTTTTTTTGCACAAGAACTAGCACTTGATCTTCCCAAAGTCCAAGCCACTGTCAATGCAAACCAACAAGGTATTCAATATGTGAGCCAAGAT
GAAGAACAAATCGCCACAGCTCCCTTCACCAATCTTTTTCAACGTTCGGTTGTTTGGACTCTTCGCCGCAGATTCCTCTCTTCCCGAAGGCGGCGACTGGACGACAGTGG
TAAGGCGGCACCAAACCTCGTTCGGCTATTCCGACTCGTTTGCAAGGCGGCGACTGGTAAGGCGGCACCAAACCTCAGCGACGGAGCAAGGCGACGACTAGCAGCGTGGG
TTTCGACCGAAGGCGGCGACCGGACCAAAAATATCCGACTCGTTGCGTTTCAACCTCAGCAAGGCGCCGACTGGACCAAAAAAAGTATTCATTCCAAAGTTGGGGGAGAA
GCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCGTATGGTAGAATAACGTACCTGGT
GACAACATTTAAGGTCGTTCCTCGGGGAACCGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTGGACTCTTAGCAGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGG
GTGATGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGTCATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAA
GATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCACCGGCAATTTGTTGAAGAAGAAGAATGAAGAAGTTGAAGAAGAGCTAGACGTTTTGATCGGGTATGAGGTTCAAATCGAGGATCATTTTCGGATCCCTGATTG
GGGACGAGACGGGGATGGAGATGGTGATGGATCCAACAATTCAAGTTCCTCAGTGTTAGAGTCTGAATCCTGCAAGACCACATTAGGACAAAAATTGAGCAATCTGTTAA
TACTTAAGCCGATAGTCATTTTTTTTGCACAAGAACTAGCACTTGATCTTCCCAAAGTCCAAGCCACTGTCAATGCAAACCAACAAGGTATTCAATATGTGAGCCAAGAT
GAAGAACAAATCGCCACAGCTCCCTTCACCAATCTTTTTCAACGTTCGGTTGTTTGGACTCTTCGCCGCAGATTCCTCTCTTCCCGAAGGCGGCGACTGGACGACAGTGG
TAAGGCGGCACCAAACCTCGTTCGGCTATTCCGACTCGTTTGCAAGGCGGCGACTGGTAAGGCGGCACCAAACCTCAGCGACGGAGCAAGGCGACGACTAGCAGCGTGGG
TTTCGACCGAAGGCGGCGACCGGACCAAAAATATCCGACTCGTTGCGTTTCAACCTCAGCAAGGCGCCGACTGGACCAAAAAAAGTATTCATTCCAAAGTTGGGGGAGAA
GCATTCGCGCAACTCTGGCGACTTGGTTTTGTTGCCAGTTTTTGTACTAAACTGAGTGATACTGTCTCAAGTGAAATAGGGAAGGCGTATGGTAGAATAACGTACCTGGT
GACAACATTTAAGGTCGTTCCTCGGGGAACCGAAGGGGCTGTCAGTCTCGAGGGAACCTTTGCTGGACTCTTAGCAGCAATCGCTCTTGCATTCGTTGGCTGTCTTTTGG
GTGATGATTCAGACTCTAACACTGAGGAACTTGAATTGTTGGATCCATCACCTGCATTAAATTTTTGTGTCATGTTTTGTCGAGGTTCTTCAAGTTTGATGTACGAGCAA
GATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAG
Protein sequenceShow/hide protein sequence
MTTGNLLKKKNEEVEEELDVLIGYEVQIEDHFRIPDWGRDGDGDGDGSNNSSSSVLESESCKTTLGQKLSNLLILKPIVIFFAQELALDLPKVQATVNANQQGIQYVSQD
EEQIATAPFTNLFQRSVVWTLRRRFLSSRRRRLDDSGKAAPNLVRLFRLVCKAATGKAAPNLSDGARRRLAAWVSTEGGDRTKNIRLVAFQPQQGADWTKKSIHSKVGGE
AFAQLWRLGFVASFCTKLSDTVSSEIGKAYGRITYLVTTFKVVPRGTEGAVSLEGTFAGLLAAIALAFVGCLLGDDSDSNTEELELLDPSPALNFCVMFCRGSSSLMYEQ
DYGDRNESGMYENFCFLV