CuGenDBv2

Gene ID	Lag0024759
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ubiquitin family protein
Genome location	chr10:5556871..5557182
RNA-Seq Expression	Lag0024759
Synteny	Lag0024759
Gene Ontology terms	GO:0016567 - protein ubiquitination (biological process) GO:0019941 - modification-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0031386 - protein tag (molecular function) GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domains	IPR000626 - Ubiquitin-like domain IPR019956 - Ubiquitin domain IPR029071 - Ubiquitin-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AES82697.1 polyubiquitin 3 [Medicago truncatula]

4.4e-17

62.96

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Query:  ITRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        +T ++ MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  ITRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

CUG38349.1 ubiquitin, putative [Bodo saltans]

2.6e-17

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT+  T+ +EVE+SDTI ++ AKI+  EGIPP QQRLIF G+QLEEG+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

KAG8381082.1 hypothetical protein BUALT_Bualt06G0085300 [Buddleja alternifolia]

4.4e-17

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Query:  TRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        TR + MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  TRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

KZV23957.1 hypothetical protein F511_26659 [Dorcoceras hygrometricum]

2.0e-17

70.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVKSLT   T+M+EVESSDTI +L AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

SCV70830.1 BQ2448_3592 [Microbotryum intermedium]

4.4e-17

65.82

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Query:  RKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        R L MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  RKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

TrEMBL top hits

e value

%identity

Alignment

A0A0S4J107 Ubiquitin, putative

1.2e-17

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT+  T+ +EVE+SDTI ++ AKI+  EGIPP QQRLIF G+QLEEG+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

A0A287TMY8 Uncharacterized protein

1.2e-17

65.82

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Query:  RKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        R+L MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  RKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

A0A287TN88 Uncharacterized protein

1.2e-17

65.82

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Query:  RKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        R+L MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  RKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

A0A2Z7AXD5 Uncharacterized protein

9.5e-18

70.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVKSLT   T+M+EVESSDTI +L AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

A0A453NEQ8 Uncharacterized protein

5.6e-18

62.65

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Query:  VVITRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        +V+  +  MQIFVK+LT  TT+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  VVITRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

SwissProt top hits

e value

%identity

Alignment

P51431 Ubiquitin-40S ribosomal protein S27a-2

6.3e-19

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

P59232 Ubiquitin-40S ribosomal protein S27a-2

6.3e-19

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

P59271 Ubiquitin-40S ribosomal protein S27a-1

6.3e-19

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

Q3E7K8 Polyubiquitin 12

2.8e-19

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI +L AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

Q9ARZ9 Ubiquitin-40S ribosomal protein S27a-1

6.3e-19

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

Arabidopsis top hits

e value

%identity

Alignment

AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein

4.5e-20

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

AT1G31340.1 related to ubiquitin 1

4.5e-20

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

AT1G55060.1 ubiquitin 12

2.0e-20

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI +L AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

AT1G65350.1 ubiquitin 13

4.5e-20

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

AT2G47110.1 ubiquitin 6

4.5e-20

66.67

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Query:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR
        MQIFVK+LT   T+ +EVESSDTI ++ AKI+  EGIPP QQRLIF G+QLE+G+T A YNI  +ST+HLVLRLR
Subjt:  MQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLR

Sequences

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CDS sequence

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ATGATAGCTATAAATTCAGAGTTACCAGCCATAGTTTTGTTGAGAATTGAATTTGTGGTGGTGATAACCCGTAAGCTAAGTATGCAAATCTTTGTTAAGTCCCTTACCAA
TACGACAACCATGATGATGGAGGTGGAGTCTTCCGACACCATTGGCAGCTTGATGGCGAAGATCGAGGCAACGGAAGGAATCCCTCCGAGGCAGCAACGATTGATCTTCG
TCGGAAGGCAACTTGAGGAAGGTCAAACCTTTGCCTACTACAACATCTCCGATCAATCAACTATTCATCTTGTACTACGTCTTCGTCCCTAG

mRNA sequence

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Protein sequence

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MIAINSELPAIVLLRIEFVVVITRKLSMQIFVKSLTNTTTMMMEVESSDTIGSLMAKIEATEGIPPRQQRLIFVGRQLEEGQTFAYYNISDQSTIHLVLRLRP

Lag0024759 (gene) of Sponge gourd (AG-4) v1 genome