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Lag0024761 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024761
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin family protein
Genome locationchr10:5566626..5568006
RNA-Seq ExpressionLag0024761
SyntenyLag0024761
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0019941 - modification-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8678251.1 Ubiquitin [Hibiscus syriacus]2.8e-1344.44Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRR--IPQLRCSS-PDLAAQRPTETSAKQP
        MQIFV++L  KT + +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI        QK +  +PQ+ CSS P     +  E   +QP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRR--IPQLRCSS-PDLAAQRPTETSAKQP

Query:  LKPTEQTNLRGYLFVTN
        ++  E+  +   L   N
Subjt:  LKPTEQTNLRGYLFVTN
KAF2301374.1 hypothetical protein GH714_023378 [Hevea brasiliensis]1.7e-1357.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L K  IP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
KAF9680291.1 hypothetical protein SADUNF_Sadunf06G0106000 [Salix dunnii]1.7e-1357.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L K  IP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
RVW67137.1 Polyubiquitin-A [Vitis vinifera]1.7e-1357.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L K  IP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
WP_213066039.1 hypothetical protein, partial [Acinetobacter baumannii]3.7e-1356Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R +P
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
TrEMBL top hitse value%identityAlignment
A0A438G4K9 Polyubiquitin-A8.0e-1457.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L K  IP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
A0A446YT58 Uncharacterized protein1.8e-1354.32Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIPQLRCSS
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R +   R SS
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIPQLRCSS
A0A565C736 Uncharacterized protein1.8e-1358.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++MAKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S+++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
A0A6A2XP96 Ubiquitin1.4e-1344.44Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRR--IPQLRCSS-PDLAAQRPTETSAKQP
        MQIFV++L  KT + +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI        QK +  +PQ+ CSS P     +  E   +QP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRR--IPQLRCSS-PDLAAQRPTETSAKQP

Query:  LKPTEQTNLRGYLFVTN
        ++  E+  +   L   N
Subjt:  LKPTEQTNLRGYLFVTN
A0A6A6LK40 Uncharacterized protein8.0e-1457.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L K  IP
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIP
SwissProt top hitse value%identityAlignment
P51431 Ubiquitin-40S ribosomal protein S27a-25.3e-1556.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
P59232 Ubiquitin-40S ribosomal protein S27a-25.3e-1556.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
P59271 Ubiquitin-40S ribosomal protein S27a-15.3e-1556.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
Q3E7K8 Polyubiquitin 122.4e-1558.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ +L AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
Q9ARZ9 Ubiquitin-40S ribosomal protein S27a-15.3e-1556.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein3.8e-1656.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
AT1G31340.1 related to ubiquitin 13.8e-1656.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
AT1G55060.1 ubiquitin 121.7e-1658.33Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ +L AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
AT1G65350.1 ubiquitin 133.8e-1656.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
AT2G47110.1 ubiquitin 63.8e-1656.94Show/hide
Query:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR
        MQIFV++L  KT   +VESSDT+ ++ AKI+  EGIPP  QRLI+ G+QLE+GRTLA YNI   S ++L  R
Subjt:  MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATCTTTGTAAGGTCCCTTCCCAATAAGACAACCGTCTTTCAGGTGGAGTCTTCCGACACCGTTGGCAGCTTAATGGCGAAGATCGAGGCAGCAGAAGGAATCCC
TCCGAGGCACCAACGATTGATCTACATCGGAAGGCAACTTGAGGAAGGTCGAACCCTTGCCTACTACAACATCTTCCCTCGATCAGCTATTAACCTTCAGAAGCGGCGTA
TCCCTCAACTCCGTTGTTCTAGCCCAGATCTGGCTGCACAAAGACCCACTGAAACCAGCGCAAAACAACCCCTAAAACCCACTGAACAAACAAATTTGCGCGGCTATTTG
TTCGTTACGAATAGATCTGGGTTGAAATGGTTGGAACGAAGCAGTCCGTTCGTTCGTGGTCCTCGACCACGACTTCAGGTGAACGACTTCAAATTTTCGTCTGGAACTGC
TACTGCTTTAGATCTCGGGTTCGTGAACGACGATTCCGACGGTGAAAGATCTGTTATTCGTGACCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAATCTTTGTAAGGTCCCTTCCCAATAAGACAACCGTCTTTCAGGTGGAGTCTTCCGACACCGTTGGCAGCTTAATGGCGAAGATCGAGGCAGCAGAAGGAATCCC
TCCGAGGCACCAACGATTGATCTACATCGGAAGGCAACTTGAGGAAGGTCGAACCCTTGCCTACTACAACATCTTCCCTCGATCAGCTATTAACCTTCAGAAGCGGCGTA
TCCCTCAACTCCGTTGTTCTAGCCCAGATCTGGCTGCACAAAGACCCACTGAAACCAGCGCAAAACAACCCCTAAAACCCACTGAACAAACAAATTTGCGCGGCTATTTG
TTCGTTACGAATAGATCTGGGTTGAAATGGTTGGAACGAAGCAGTCCGTTCGTTCGTGGTCCTCGACCACGACTTCAGGTGAACGACTTCAAATTTTCGTCTGGAACTGC
TACTGCTTTAGATCTCGGGTTCGTGAACGACGATTCCGACGGTGAAAGATCTGTTATTCGTGACCAATAG
Protein sequenceShow/hide protein sequence
MQIFVRSLPNKTTVFQVESSDTVGSLMAKIEAAEGIPPRHQRLIYIGRQLEEGRTLAYYNIFPRSAINLQKRRIPQLRCSSPDLAAQRPTETSAKQPLKPTEQTNLRGYL
FVTNRSGLKWLERSSPFVRGPRPRLQVNDFKFSSGTATALDLGFVNDDSDGERSVIRDQ