; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024766 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024766
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr10:5590700..5591908
RNA-Seq ExpressionLag0024766
SyntenyLag0024766
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY85402.1 hypothetical protein Acr_04g0001400 [Actinidia rufa]4.4e-5746.4Show/hide
Query:  SSQPFYPPPTGFFQPYYSLNHTRPQY---PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQS
        S+ P  PPPT    P  S+ +  PQ     PLP               PS+ QPL+VKL D N+++WK QLLN+V+ANGL  FLDGS   PP+FLD QQ 
Subjt:  SSQPFYPPPTGFFQPYYSLNHTRPQY---PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQS

Query:  QPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDH
        Q NP+F +W+RYNR +M W+Y+S++E  +G+IV   +AS+IW +L+R Y + + A +  L+T LQ I+K+GL+   Y+ + + + +  ++IGEP++Y DH
Subjt:  QPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDH

Query:  LAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDT
        L + L GLG +YN FVTSIQ++A  P++E+V SLLL+Y+ARLE+Q++ DT
Subjt:  LAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDT

PON47862.1 hypothetical protein TorRG33x02_321990 [Trema orientale]3.5e-5442.61Show/hide
Query:  SNPYSSQP-FYPPPTGFFQPYYSLNHTRPQYPPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQ
        +NP +  P    PPT        +   +P  PPLP               PS+ QP ++KL   N+L+WKNQLLNV++ANGL  F+DGS P PP+F D  
Subjt:  SNPYSSQP-FYPPPTGFFQPYYSLNHTRPQYPPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQ

Query:  QSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYR
        +   N +++ W+R+NR IM W+Y+SL++  MG+IV   +A EIW +L + Y S + A+I  L+ +LQ +RKDGL+  +Y+ + K+I +  +A+GEP+S +
Subjt:  QSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYR

Query:  DHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRP
        DHL ++  GL  EYNAFVTSI  R DN  LE++ SLLL+YE RLE QN+   L+  QANLA L+++        +P   NF  P
Subjt:  DHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRP

RVW69807.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.9e-5247.7Show/hide
Query:  YPPLPQA--------PQTPQPHFAPN--PYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMC
        +PP P +         Q P P       P PSL Q LS+KL ++N LL K+QLLNV++ANGL  F+D    +PPK+LDA   Q NP+F+ W+R N+ +M 
Subjt:  YPPLPQA--------PQTPQPHFAPN--PYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMC

Query:  WMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTS
        W+YSSL+   +G+IV   TA +IW SL   Y+S + A +M L +QLQRI+K  + +S+YLS++K + D+F+ IGEP+SYRD L  IL+GL  EY+ FVTS
Subjt:  WMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTS

Query:  IQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQAN
        I NR+D P+L++V SLL  YE RL +++    LN  QAN
Subjt:  IQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQAN

RVX14312.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]5.8e-4941.11Show/hide
Query:  PQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETA
        P   FA +  PSL Q  +V L  SN+LLW+ Q+LN+++ANGL   + G IPAP +FL       NP++  W+R NR +MCW+YSSL+E  M +I+ L+TA
Subjt:  PQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETA

Query:  SEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAY
        SEIW +L++ + + + ARIM L+ QLQ  +K GLS+ +YL +IK I D   AIGE I+ +D + ++L GLG+EYN+FV ++ +  +  +LE++ S+LL +
Subjt:  SEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAY

Query:  EARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSS
        E +LE+Q+  +  NL QAN+ ++++  +++++          R  FN   +SS
Subjt:  EARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSS

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]4.4e-9763.92Show/hide
Query:  PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKM
        PP P     P   F+ NP+P+LPQPL+VKL D+NFLLWKNQLLN V+ANGL G+LDG+I  PP+FLD  Q QPNP +  WERYNR +MCW+YSSLSEEKM
Subjt:  PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKM

Query:  GEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALE
        GE+V+LET  +IW+SL R YDSKTTARIMGLKT+LQ +RKDG SVSQYL++IK+I DKF+A+GEP+SYRDHLAH+LDGLGSEYNAFVTSI NRAD+P+LE
Subjt:  GEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALE

Query:  DVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSSSPMTSTVFPLVFLVSLKPNPSKNGLLVQI
        DVRSLLLAYEARL+KQN+VD LN+AQANL +LSL +NS+R  P+ S  N  +  F   P S++   S +     +    P PS + +  QI
Subjt:  DVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSSSPMTSTVFPLVFLVSLKPNPSKNGLLVQI

TrEMBL top hitse value%identityAlignment
A0A2P5BGF8 Uncharacterized protein1.7e-5442.61Show/hide
Query:  SNPYSSQP-FYPPPTGFFQPYYSLNHTRPQYPPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQ
        +NP +  P    PPT        +   +P  PPLP               PS+ QP ++KL   N+L+WKNQLLNV++ANGL  F+DGS P PP+F D  
Subjt:  SNPYSSQP-FYPPPTGFFQPYYSLNHTRPQYPPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQ

Query:  QSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYR
        +   N +++ W+R+NR IM W+Y+SL++  MG+IV   +A EIW +L + Y S + A+I  L+ +LQ +RKDGL+  +Y+ + K+I +  +A+GEP+S +
Subjt:  QSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYR

Query:  DHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRP
        DHL ++  GL  EYNAFVTSI  R DN  LE++ SLLL+YE RLE QN+   L+  QANLA L+++        +P   NF  P
Subjt:  DHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRP

A0A438GC62 Retrovirus-related Pol polyprotein from transposon RE19.3e-5347.7Show/hide
Query:  YPPLPQA--------PQTPQPHFAPN--PYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMC
        +PP P +         Q P P       P PSL Q LS+KL ++N LL K+QLLNV++ANGL  F+D    +PPK+LDA   Q NP+F+ W+R N+ +M 
Subjt:  YPPLPQA--------PQTPQPHFAPN--PYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMC

Query:  WMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTS
        W+YSSL+   +G+IV   TA +IW SL   Y+S + A +M L +QLQRI+K  + +S+YLS++K + D+F+ IGEP+SYRD L  IL+GL  EY+ FVTS
Subjt:  WMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTS

Query:  IQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQAN
        I NR+D P+L++V SLL  YE RL +++    LN  QAN
Subjt:  IQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQAN

A0A6J1DQX7 uncharacterized protein LOC1110223152.1e-9763.92Show/hide
Query:  PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKM
        PP P     P   F+ NP+P+LPQPL+VKL D+NFLLWKNQLLN V+ANGL G+LDG+I  PP+FLD  Q QPNP +  WERYNR +MCW+YSSLSEEKM
Subjt:  PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKM

Query:  GEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALE
        GE+V+LET  +IW+SL R YDSKTTARIMGLKT+LQ +RKDG SVSQYL++IK+I DKF+A+GEP+SYRDHLAH+LDGLGSEYNAFVTSI NRAD+P+LE
Subjt:  GEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALE

Query:  DVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSSSPMTSTVFPLVFLVSLKPNPSKNGLLVQI
        DVRSLLLAYEARL+KQN+VD LN+AQANL +LSL +NS+R  P+ S  N  +  F   P S++   S +     +    P PS + +  QI
Subjt:  DVRSLLLAYEARLEKQNSVDTLNLAQANLASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSSSPMTSTVFPLVFLVSLKPNPSKNGLLVQI

A0A7J0EGI5 Uncharacterized protein2.1e-5746.4Show/hide
Query:  SSQPFYPPPTGFFQPYYSLNHTRPQY---PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQS
        S+ P  PPPT    P  S+ +  PQ     PLP               PS+ QPL+VKL D N+++WK QLLN+V+ANGL  FLDGS   PP+FLD QQ 
Subjt:  SSQPFYPPPTGFFQPYYSLNHTRPQY---PPLPQAPQTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQS

Query:  QPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDH
        Q NP+F +W+RYNR +M W+Y+S++E  +G+IV   +AS+IW +L+R Y + + A +  L+T LQ I+K+GL+   Y+ + + + +  ++IGEP++Y DH
Subjt:  QPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDH

Query:  LAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDT
        L + L GLG +YN FVTSIQ++A  P++E+V SLLL+Y+ARLE+Q++ DT
Subjt:  LAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDT

A0A803NL56 Uncharacterized protein8.7e-5139.87Show/hide
Query:  TRPQYPPLPQAP----QTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWM
        T  Q P    AP     +  P   PN + S  Q +SVKL D+N+L+W+ Q+ N+++ANGL G++DG++    +F ++  SQ +P F TW RYN+ +M W+
Subjt:  TRPQYPPLPQAP----QTPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWM

Query:  YSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQ
        Y+SLS+  +G+IV   TA+EIW SL+R+Y + + AR    +  LQ ++KD L+ S YL ++K + +  +++G+PIS ++HL ++L+GLG EYNAFVT I 
Subjt:  YSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQ

Query:  NRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQANLASLSL-HNNSRRSSPRPSSVNFPRPPFNP-------LPFSSSPMTSTVFPLVFLVSLKPNPS
         R   P +E+V +LLL+YEARLE+QN+  + +  QAN A+LS      + SS +PSS   PR P +P       +P    P      P   L   +P P 
Subjt:  NRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQANLASLSL-HNNSRRSSPRPSSVNFPRPPFNP-------LPFSSSPMTSTVFPLVFLVSLKPNPS

Query:  K
        +
Subjt:  K

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-0825Show/hide
Query:  DSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGL
        D+ F  W+ ++ ++++  GLH  LD     P    D  +++       W   +      +   LS++ +  I++ +TA  IW  L+  Y SKT    + L
Subjt:  DSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTARIMGL

Query:  KTQLQRIR-KDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRS-LLLAYEARLEKQNSVDTLNLAQANL
        K QL  +   +G +   +L+    +  + + +G  I   D    +L+ L S Y+   T+I +      L+DV S LLL  + R + +N    L       
Subjt:  KTQLQRIR-KDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRS-LLLAYEARLEKQNSVDTLNLAQANL

Query:  ASLSLHNNSRRSSPRPSSVN
        +     NN  RS  R  S N
Subjt:  ASLSLHNNSRRSSPRPSSVN

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-1924.09Show/hide
Query:  KLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQS-QPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTAR
        KLT +N+L+W  Q+  +     L GFLDGS   PP  +    + + NPD+  W+R ++ I   +  ++S      +    TA++IW +L++ Y + +   
Subjt:  KLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQS-QPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKRSYDSKTTAR

Query:  IMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNL---
        +  L+TQL++  K   ++  Y+  +    D+ + +G+P+ + + +  +L+ L  EY   +  I  +   P L ++   LL +E+++   +S   + +   
Subjt:  IMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNL---

Query:  --AQANLASLSLHNNSRRSS
          +  N  + + +NN  R++
Subjt:  --AQANLASLSLHNNSRRSS

Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5.1e-1125.85Show/hide
Query:  PHFAPNPYPSLPQPLSV-KLT--DSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLET
        P++ P P    P   S+ KL+  + N++ WK +  + +      GF+DG++P P  F        +P +  WE+ N  +M W+ +S++++ +  ++  ET
Subjt:  PHFAPNPYPSLPQPLSV-KLT--DSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLET

Query:  ASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDI
        A ++W  L+R +      +I  L+ +L  +R+ G SV +Y  ++  +
Subjt:  ASEIWNSLKRSYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDI

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.8e-1725.71Show/hide
Query:  LSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNP-DFLTWERYNRFIMCWMYSSLSEEKMGEIVNLE-TASEIWNSLKRSYDSK
        +++ L   N+ +W+     + L+ G+ G +DGS            S P P     W+  +  +  W+Y ++++  +  I+ +  TA ++W SL+  +   
Subjt:  LSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNP-DFLTWERYNRFIMCWMYSSLSEEKMGEIVNLE-TASEIWNSLKRSYDSK

Query:  TTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLN
          AR +  + +L+    D LSV +Y  ++K ++D  + +  PIS R  + H+L+GL  +Y+  +  I++++  P+  + RS+LL  E+RL  ++     +
Subjt:  TTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLN

Query:  LAQANLASLS
        L+  N  SLS
Subjt:  LAQANLASLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAGAAGCCTCCTCCTCATCTTCTTCTTCTGCACCGCTTACCTCACCTGTTCTTTCTCCGTCAACTCCCATCACTACACCGGTTGCTACGCCGATAAACCAGAC
AGCTCAACCACGCCCTGTTTTTCCCCAACTTCACCCAAACTCCACCCCTGTTTTTTCTCACATTCGACCTTCGACTGCTACTCACACTCCTCCTCAGACATATCCATCGA
ACCCATACTCATCTCAGCCGTTTTATCCACCTCCTACTGGTTTCTTCCAACCTTATTACTCTTTAAACCATACACGCCCACAATACCCACCACTGCCGCAAGCTCCTCAA
ACACCTCAGCCTCATTTTGCCCCAAATCCCTACCCGTCTCTACCTCAACCCTTATCAGTTAAACTCACAGATTCGAATTTCTTACTCTGGAAGAATCAATTGCTAAATGT
GGTGCTAGCTAATGGACTTCATGGCTTCCTTGATGGCTCAATACCGGCTCCTCCAAAATTTCTGGATGCTCAACAATCTCAACCAAATCCTGATTTTCTTACTTGGGAAA
GGTATAATCGATTTATTATGTGTTGGATGTATTCCTCGCTTTCTGAAGAAAAAATGGGTGAAATAGTCAATTTGGAAACTGCCTCTGAAATATGGAACTCCCTGAAACGT
TCTTATGATTCTAAGACGACTGCTAGGATAATGGGTCTTAAAACACAACTCCAACGAATTAGGAAGGATGGTCTCTCTGTTAGTCAGTACTTATCTCAGATTAAGGATAT
CACCGATAAATTTTCAGCTATTGGGGAACCCATCTCTTATCGGGATCATTTGGCTCACATCTTAGATGGTCTTGGGAGTGAGTACAATGCGTTTGTTACCTCTATTCAGA
ATCGTGCTGATAATCCTGCTTTAGAGGATGTTCGGAGTCTTTTACTTGCTTATGAGGCTCGGTTAGAGAAACAGAATAGTGTGGATACTCTTAACTTAGCTCAGGCGAAT
CTTGCTAGTCTTAGTCTCCACAATAACAGTCGTCGGTCCTCTCCTCGCCCATCTTCGGTGAATTTTCCTAGACCTCCCTTCAATCCATTGCCTTTTTCCTCTTCTCCCAT
GACTTCCACTGTTTTTCCTCTAGTATTCTTGGTAAGCCTCAAGCCCAACCCTTCCAAAAATGGTCTTCTCGTTCAAATTCTAGTCGCCCCAGTGTCAGATATGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAGAAGCCTCCTCCTCATCTTCTTCTTCTGCACCGCTTACCTCACCTGTTCTTTCTCCGTCAACTCCCATCACTACACCGGTTGCTACGCCGATAAACCAGAC
AGCTCAACCACGCCCTGTTTTTCCCCAACTTCACCCAAACTCCACCCCTGTTTTTTCTCACATTCGACCTTCGACTGCTACTCACACTCCTCCTCAGACATATCCATCGA
ACCCATACTCATCTCAGCCGTTTTATCCACCTCCTACTGGTTTCTTCCAACCTTATTACTCTTTAAACCATACACGCCCACAATACCCACCACTGCCGCAAGCTCCTCAA
ACACCTCAGCCTCATTTTGCCCCAAATCCCTACCCGTCTCTACCTCAACCCTTATCAGTTAAACTCACAGATTCGAATTTCTTACTCTGGAAGAATCAATTGCTAAATGT
GGTGCTAGCTAATGGACTTCATGGCTTCCTTGATGGCTCAATACCGGCTCCTCCAAAATTTCTGGATGCTCAACAATCTCAACCAAATCCTGATTTTCTTACTTGGGAAA
GGTATAATCGATTTATTATGTGTTGGATGTATTCCTCGCTTTCTGAAGAAAAAATGGGTGAAATAGTCAATTTGGAAACTGCCTCTGAAATATGGAACTCCCTGAAACGT
TCTTATGATTCTAAGACGACTGCTAGGATAATGGGTCTTAAAACACAACTCCAACGAATTAGGAAGGATGGTCTCTCTGTTAGTCAGTACTTATCTCAGATTAAGGATAT
CACCGATAAATTTTCAGCTATTGGGGAACCCATCTCTTATCGGGATCATTTGGCTCACATCTTAGATGGTCTTGGGAGTGAGTACAATGCGTTTGTTACCTCTATTCAGA
ATCGTGCTGATAATCCTGCTTTAGAGGATGTTCGGAGTCTTTTACTTGCTTATGAGGCTCGGTTAGAGAAACAGAATAGTGTGGATACTCTTAACTTAGCTCAGGCGAAT
CTTGCTAGTCTTAGTCTCCACAATAACAGTCGTCGGTCCTCTCCTCGCCCATCTTCGGTGAATTTTCCTAGACCTCCCTTCAATCCATTGCCTTTTTCCTCTTCTCCCAT
GACTTCCACTGTTTTTCCTCTAGTATTCTTGGTAAGCCTCAAGCCCAACCCTTCCAAAAATGGTCTTCTCGTTCAAATTCTAGTCGCCCCAGTGTCAGATATGTGGTAA
Protein sequenceShow/hide protein sequence
MSTEASSSSSSSAPLTSPVLSPSTPITTPVATPINQTAQPRPVFPQLHPNSTPVFSHIRPSTATHTPPQTYPSNPYSSQPFYPPPTGFFQPYYSLNHTRPQYPPLPQAPQ
TPQPHFAPNPYPSLPQPLSVKLTDSNFLLWKNQLLNVVLANGLHGFLDGSIPAPPKFLDAQQSQPNPDFLTWERYNRFIMCWMYSSLSEEKMGEIVNLETASEIWNSLKR
SYDSKTTARIMGLKTQLQRIRKDGLSVSQYLSQIKDITDKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRADNPALEDVRSLLLAYEARLEKQNSVDTLNLAQAN
LASLSLHNNSRRSSPRPSSVNFPRPPFNPLPFSSSPMTSTVFPLVFLVSLKPNPSKNGLLVQILVAPVSDMW