; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024774 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024774
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr10:5672234..5673157
RNA-Seq ExpressionLag0024774
SyntenyLag0024774
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.1e-2935.71Show/hide
Query:  VRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQR-----------------------
        V  R R +P    LT+KQ   ESL+D + RF  E LQVEG  D V+L A +SG++DE L  S  K +P   +EA  R                       
Subjt:  VRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQR-----------------------

Query:  ----------------PRSHRAVRNQEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY
                         R   + ++   +F +YTP T   EQVL  I+D  LLK PE++++   +R+K +YC+FH DHGHAT++C  L++E+E LIR+GY
Subjt:  ----------------PRSHRAVRNQEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY

Query:  PKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSE
         K +V     + P     G+   +P  EI+TI+GG  E
Subjt:  PKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSE

XP_030930730.1 uncharacterized protein LOC115956518 [Quercus lobata]3.7e-2631.14Show/hide
Query:  KFAAKDNVRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE----------------ANQR
        K    + +R +  ++   + LT++QG  ESL+  I RF  E L V+  DD + L A  +G+  +  ++ + +  P   AE                A +R
Subjt:  KFAAKDNVRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE----------------ANQR

Query:  PRSHR----AVRNQE------------------------ARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQL
         R+ R      R+ E                         R   YTPL A  +QVL  I+D   LK PEK++ DP++RNKNKYC FH DHGH   EC  L
Subjt:  PRSHR----AVRNQE------------------------ARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQL

Query:  RDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        + +IE LIR+G  + F+G D     L     +    PL EI+ I+GG+S       G+   S++ Y   + N+
Subjt:  RDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030932814.1 uncharacterized protein LOC115958537 [Quercus lobata]1.6e-2633.6Show/hide
Query:  LTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKA-----------------------------------EANQRP
        LT++QG  ESL+  I RF  E L V+  DD + L A  +G+  +  ++ + +  P   A                                   E   RP
Subjt:  LTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKA-----------------------------------EANQRP

Query:  RSHRAVRNQE---------ARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND
        +  RA   +E          R   YTPL A  +QVL  I+D   LK PEK++ DP++RNKNKYC FH DHGH T EC  L+ +IE LIR+G  + FVG D
Subjt:  RSHRAVRNQE---------ARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND

Query:  KSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
             L     +    PL EI  I+GG+S       G+   S++ Y  A+ N+
Subjt:  KSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030955724.1 uncharacterized protein LOC115977839 [Quercus lobata]1.3e-2833.2Show/hide
Query:  KFAAKDNVRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQ-----------------
        K    + +  +  ++   + LT++QG  ESL+  I RF  E L V+  DD + L A  +G+  +  ++ + +  P   AE  +                 
Subjt:  KFAAKDNVRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQ-----------------

Query:  -RPRSHRAVRNQE---------ARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFV
         RP+  R    +E          R   YTPL A   QVL  I+D   LK PEK++ DP++RNKNKYC FH DHGH T EC  L+ +IE LIR+G  K FV
Subjt:  -RPRSHRAVRNQE---------ARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFV

Query:  GNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI
        G D++   L     +    PL EI+ I+GG+        G+   S++ Y  A+ N+
Subjt:  GNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNI

XP_030970531.1 uncharacterized protein LOC115990904 [Quercus lobata]3.7e-2632.01Show/hide
Query:  DNVRARNRQKPQINS-LTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE----------------ANQRPRSH
        +N     R K  ++S LT++QG  ESL+  I RF  E L V+  DD + L A  +G+  +  ++ + +  P   AE                A +R RS 
Subjt:  DNVRARNRQKPQINS-LTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE----------------ANQRPRSH

Query:  RAVRN----------------------------QEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI
        R   N                               R  +YTPL A  EQVL  I+D   LK P+K++ DP++RN+NKYC FH DHGH T EC  L+ +I
Subjt:  RAVRN----------------------------QEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEI

Query:  EALIRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSA
        E LIR+G  +GF+G D+          +    PL EI+ I+GGSS       G+   S++ Y   + +I    ++  A
Subjt:  EALIRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSA

TrEMBL top hitse value%identityAlignment
A0A2N9FPT8 Reverse transcriptase domain-containing protein1.6e-2736.97Show/hide
Query:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQRPRSHRAVRNQEARFNRYTPLTASFEQVLAA
        +P  + L V+Q   E+L+  + RF  E L V+G DD V LTA ISGLQ    L S+ K  P   +E  +R   +R  R    RFN +TPL A  +++   
Subjt:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQRPRSHRAVRNQEARFNRYTPLTASFEQVLAA

Query:  IQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND---------KSKRPLPADQGKGGANPLFEIQTILGGSS
        I+D   L+ P KL ++PD+R K+KYC FH DHGH T +C  L+ +IE LI++G  + FV  D         + +RP   D+ +    P+ EI  I GG  
Subjt:  IQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND---------KSKRPLPADQGKGGANPLFEIQTILGGSS

Query:  EEGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD
            AA G  + SR+ Y   + N  + +KA  T    D
Subjt:  EEGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD

A0A2N9HHE1 Ribonuclease H1.6e-2737.5Show/hide
Query:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE-ANQ-RPRSHRAVRNQEARFNRYTPLTASFEQVL
        +P  + L V+Q   E+L+  + RF  E L V+G DD V LTA ISGLQ    L S+ K  P   +E  NQ + R  R  R    RFN +TPL A  +++ 
Subjt:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE-ANQ-RPRSHRAVRNQEARFNRYTPLTASFEQVL

Query:  AAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSK------RPLPADQGKGGANPLFEIQTILGGSSE
          I+D   L+ P KL ++PDRR K+KYC FH DHGH T +C  L+ +IE LI++G  + FV  D+ +      RP           P+ EI  I GG + 
Subjt:  AAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSK------RPLPADQGKGGANPLFEIQTILGGSSE

Query:  EGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD-----GRGRAFEGSS-YPL
            A G  + SR+ Y   + N  + +KA  T    D         A EG+S YPL
Subjt:  EGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD-----GRGRAFEGSS-YPL

A0A2N9I7L6 Uncharacterized protein4.7e-2736.84Show/hide
Query:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE--ANQ-------RPRSHRAVRNQEARFNRYTPLT
        +P  + L V+Q   E+L+  + RF  E L V+G DD V LTA ISGLQ    L S+ K  P   +E   NQ       R R  R  R    RFN +TPL 
Subjt:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE--ANQ-------RPRSHRAVRNQEARFNRYTPLT

Query:  ASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND---------KSKRPLPADQGKGGANPLFE
        A  +++   I+D   L+ P KL ++PD+R K+KYC FH DHGH T +C  L+ +IE LI++G  + FV  D         + +RP   D+ +    P+ E
Subjt:  ASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND---------KSKRPLPADQGKGGANPLFE

Query:  IQTILGGSSEEGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD
        I  I GG      AA G  + SR+ Y   + N  + +KA  T    D
Subjt:  IQTILGGSSEEGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD

A0A2N9IAR9 Ribonuclease H7.2e-2837.92Show/hide
Query:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE-ANQ-RPRSHRAVRNQEARFNRYTPLTASFEQVL
        +P  + L V+Q   E+L+  + RF  E L V+G DD V LTA ISGLQ    L S+ K  P   +E  NQ + R  R  R    RFN +TPL A  +++ 
Subjt:  KPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAE-ANQ-RPRSHRAVRNQEARFNRYTPLTASFEQVL

Query:  AAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND---------KSKRPLPADQGKGGANPLFEIQTILGG
          I+D   L+ P KL ++PDRR K+KYC FH DHGH T +C  L+ +IE LI++G  + FV  D         + +RP   D+ +    P+ EI  I GG
Subjt:  AAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGND---------KSKRPLPADQGKGGANPLFEIQTILGG

Query:  SSEEGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD
              AA G  + SR+ Y   + N  + +KA  T    D
Subjt:  SSEEGGAAHGEQKMSRECYFMALGN--IDRKAQATSACGD

A0A6J1DWY0 uncharacterized protein LOC1110252931.0e-2935.71Show/hide
Query:  VRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQR-----------------------
        V  R R +P    LT+KQ   ESL+D + RF  E LQVEG  D V+L A +SG++DE L  S  K +P   +EA  R                       
Subjt:  VRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQR-----------------------

Query:  ----------------PRSHRAVRNQEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY
                         R   + ++   +F +YTP T   EQVL  I+D  LLK PE++++   +R+K +YC+FH DHGHAT++C  L++E+E LIR+GY
Subjt:  ----------------PRSHRAVRNQEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGY

Query:  PKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSE
         K +V     + P     G+   +P  EI+TI+GG  E
Subjt:  PKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCACAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAACGTCAGAGCCCGGAACCGACAGAAGCC
TCAGATCAACTCGTTGACAGTAAAGCAGGGGCTTCGAGAAAGCTTGAAGGATTGTATTAACAGATTTTGTAATGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTG
CCTTGACTGCTATGATTTCAGGTTTGCAGGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCAACCAGAGGCCAAGGAGCCACAGG
GCTGTGCGGAACCAAGAAGCCAGATTCAACAGGTATACACCACTAACAGCTTCCTTTGAACAGGTCTTGGCCGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAA
GTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCC
TAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTACCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACA
ATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAAC
GTCGGCCTGTGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCCTCTTCCAATGAAACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACTCCTCGGCCAATGGCCGAGGCCGAGCAGAAGCCCAATCACAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAACGTCAGAGCCCGGAACCGACAGAAGCC
TCAGATCAACTCGTTGACAGTAAAGCAGGGGCTTCGAGAAAGCTTGAAGGATTGTATTAACAGATTTTGTAATGAAGTTTTGCAGGTAGAAGGCCATGACGATGGAGTTG
CCTTGACTGCTATGATTTCAGGTTTGCAGGATGAAAGACTGCTCAACTCGATCAGCAAGAGCAGTCCTTGGCCAAAGGCCGAGGCCAACCAGAGGCCAAGGAGCCACAGG
GCTGTGCGGAACCAAGAAGCCAGATTCAACAGGTATACACCACTAACAGCTTCCTTTGAACAGGTCTTGGCCGCAATACAGGACACAAATCTGTTGAAACGCCCAGAAAA
GTTGAGATCAGACCCCGATAGGAGGAACAAAAACAAATACTGCATGTTCCACGGAGACCACGGTCATGCAACTCGGGAATGCATACAGTTGAGGGACGAGATAGAAGCCC
TAATCCGAAAAGGTTACCCCAAGGGGTTCGTTGGGAACGACAAAAGCAAGAGGCCACTACCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACA
ATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTCGAGGGAATGTTACTTTATGGCGCTCGGGAACATCGACAGGAAGGCTCAAGCAAC
GTCGGCCTGTGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCCTCTTCCAATGAAACGTTGA
Protein sequenceShow/hide protein sequence
MSTPRPMAEAEQKPNHKKSPQKFAAKDNVRARNRQKPQINSLTVKQGLRESLKDCINRFCNEVLQVEGHDDGVALTAMISGLQDERLLNSISKSSPWPKAEANQRPRSHR
AVRNQEARFNRYTPLTASFEQVLAAIQDTNLLKRPEKLRSDPDRRNKNKYCMFHGDHGHATRECIQLRDEIEALIRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQT
ILGGSSEEGGAAHGEQKMSRECYFMALGNIDRKAQATSACGDGRGRAFEGSSYPLPMKR