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Lag0024781 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024781
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGATA transcription factor
Genome locationchr10:5719956..5722015
RNA-Seq ExpressionLag0024781
SyntenyLag0024781
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044768.1 GATA transcription factor 5-like [Cucumis melo var. makuwa]7.6e-1661.62Show/hide
Query:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR
        SS ++S  EEQ E+DGSV      F+  IPV ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIIS+RFE EI VTKK    S S++ R
Subjt:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR

TYK16696.1 GATA transcription factor 5-like [Cucumis melo var. makuwa]7.6e-1661.62Show/hide
Query:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR
        SS ++S  EEQ E+DGSV      F+  IPV ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIIS+RFE EI VTKK    S S++ R
Subjt:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR

XP_004146485.1 GATA transcription factor 5 [Cucumis sativus]3.2e-1457.14Show/hide
Query:  PLLFSSSTKLSATEEQ-PENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSS
        P    SS +++ +EEQ  E+DGSV      F+  IP  ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIISDRFE EI  TKK    S 
Subjt:  PLLFSSSTKLSATEEQ-PENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSS

Query:  SKRQR
        S++ R
Subjt:  SKRQR

XP_008465634.1 PREDICTED: GATA transcription factor 5-like [Cucumis melo]9.0e-1760.58Show/hide
Query:  PLLFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSS
        P L  SS ++S  EEQ E+DGSV      F+  IPV ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIIS+RFE EI VTKK    S S
Subjt:  PLLFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSS

Query:  KRQR
        ++ R
Subjt:  KRQR

XP_038876782.1 GATA transcription factor 5-like [Benincasa hispida]1.6e-1353.98Show/hide
Query:  SPPLHSLSSPLLFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVT
        S P  S     L  SS + +  EEQ E D SV      F+  IPV ARSK  R  GRV CL SPSL+ES S STTSSSSSSPA PW II DRFE EI V+
Subjt:  SPPLHSLSSPLLFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVT

Query:  KKTILSSSSKRQR
        KK    S S++ R
Subjt:  KKTILSSSSKRQR

TrEMBL top hitse value%identityAlignment
A0A0A0KUP5 GATA transcription factor1.5e-1457.14Show/hide
Query:  PLLFSSSTKLSATEEQ-PENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSS
        P    SS +++ +EEQ  E+DGSV      F+  IP  ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIISDRFE EI  TKK    S 
Subjt:  PLLFSSSTKLSATEEQ-PENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSS

Query:  SKRQR
        S++ R
Subjt:  SKRQR

A0A1S3CPB9 GATA transcription factor4.3e-1760.58Show/hide
Query:  PLLFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSS
        P L  SS ++S  EEQ E+DGSV      F+  IPV ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIIS+RFE EI VTKK    S S
Subjt:  PLLFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSS

Query:  KRQR
        ++ R
Subjt:  KRQR

A0A5A7TPF0 GATA transcription factor 5-like3.7e-1661.62Show/hide
Query:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR
        SS ++S  EEQ E+DGSV      F+  IPV ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIIS+RFE EI VTKK    S S++ R
Subjt:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR

A0A5D3D1W9 GATA transcription factor 5-like3.7e-1661.62Show/hide
Query:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR
        SS ++S  EEQ E+DGSV      F+  IPV ARSK  RT GRV CL SPSL++S S STTSSSSSSPA PWLIIS+RFE EI VTKK    S S++ R
Subjt:  SSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEISVTKKTILSSSSKRQR

A0A6J1JC71 GATA transcription factor6.5e-1358Show/hide
Query:  LFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTT-SSSSSSPAGPWLIISDRFESEISVTKKTILSSSSK
        L  SS   +A ++QP N GS+      F+  IPV ARSK  RT GRV CLASPSL+ES SSSTT SSSSSSPA PWLI+ DRFE EI   K    S S K
Subjt:  LFSSSTKLSATEEQPENDGSVFAIGALFQ-DIPVMARSKWARTDGRVSCLASPSLSESFSSSTT-SSSSSSPAGPWLIISDRFESEISVTKKTILSSSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCGCCGCCGCCGCCATCCAACACCTCTCTCTCCTCTCTCCCCCACTTCACTCTCTCTCCTCTCCCCTTCTCTTCTCTTCGTCGACGAAATTGTCTGCCACGGA
GGAGCAACCGGAGAACGACGGTTCTGTTTTCGCCATCGGAGCCCTGTTTCAAGACATTCCGGTCATGGCTCGAAGCAAATGGGCGAGAACCGACGGCCGAGTTTCGTGCC
TCGCTTCACCGTCGTTGAGCGAGTCTTTCTCCAGTTCCACAACGTCCTCCTCTTCCTCGTCGCCGGCGGGTCCTTGGCTTATAATTTCCGACCGATTTGAATCAGAAATT
TCGGTAACCAAGAAAACAATATTATCATCGTCATCGAAGCGGCAGCGACGACGACGGAAAGGGTGGCGACGGGAAGGGAAAGAAGGGAGAAAGAAAGAAGAAAGAAAGAT
AATGGGTACCGTGGGGTGGGGGAGAAGAGAGAGGGAGAGATTTTTTGGGTGGGTAAGAAGAAGAAGAGAGGTGGAGGGTGGAGGGCGGCGGGGGCTATCGTCGGACGCCG
ACGAGGAGGGGAAGGAGGGGTACATGAATGAACCGAAGCCACATCTGAATGAGAGGGATCCTGAGGACATGAAAGTATGGTCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGTCGCCGCCGCCGCCATCCAACACCTCTCTCTCCTCTCTCCCCCACTTCACTCTCTCTCCTCTCCCCTTCTCTTCTCTTCGTCGACGAAATTGTCTGCCACGGA
GGAGCAACCGGAGAACGACGGTTCTGTTTTCGCCATCGGAGCCCTGTTTCAAGACATTCCGGTCATGGCTCGAAGCAAATGGGCGAGAACCGACGGCCGAGTTTCGTGCC
TCGCTTCACCGTCGTTGAGCGAGTCTTTCTCCAGTTCCACAACGTCCTCCTCTTCCTCGTCGCCGGCGGGTCCTTGGCTTATAATTTCCGACCGATTTGAATCAGAAATT
TCGGTAACCAAGAAAACAATATTATCATCGTCATCGAAGCGGCAGCGACGACGACGGAAAGGGTGGCGACGGGAAGGGAAAGAAGGGAGAAAGAAAGAAGAAAGAAAGAT
AATGGGTACCGTGGGGTGGGGGAGAAGAGAGAGGGAGAGATTTTTTGGGTGGGTAAGAAGAAGAAGAGAGGTGGAGGGTGGAGGGCGGCGGGGGCTATCGTCGGACGCCG
ACGAGGAGGGGAAGGAGGGGTACATGAATGAACCGAAGCCACATCTGAATGAGAGGGATCCTGAGGACATGAAAGTATGGTCAAGATAA
Protein sequenceShow/hide protein sequence
MAVAAAAIQHLSLLSPPLHSLSSPLLFSSSTKLSATEEQPENDGSVFAIGALFQDIPVMARSKWARTDGRVSCLASPSLSESFSSSTTSSSSSSPAGPWLIISDRFESEI
SVTKKTILSSSSKRQRRRRKGWRREGKEGRKKEERKIMGTVGWGRRERERFFGWVRRRREVEGGGRRGLSSDADEEGKEGYMNEPKPHLNERDPEDMKVWSR