| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 4.6e-86 | 36.29 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NLDW PIS + L +PF E E+ LKS NK+PGPDG+ ++F +KSW +K + +F DF I+N+ VNET I LI K +D+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
SLTT+ ++ AFVK RQIT+AIL+ANE +DFW+ + +IKLDIEKAFDK+NW FID +L+ K
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
Query: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
D D+ ++N I+ FE ASG
Subjt: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
LNIN KS+I +NV D+ IA SWG + HL SYLG PLG P+ ++FW +V++KIQ+ L NW++ +SKGG +T I +TL S+P+ +SVFK P+
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
I + + R F+WNG+S+ NI L+ W+ + +PK GGLG + +N L KWLW+F E PLWKRLI++KY MG+ + S NS
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
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| KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.6e-86 | 36.49 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NLDW PIS + L +PF E E+ LKS NK+PGPDGFT++F +KSW +KH + +F DF N +N+ VNET I LI K +SD+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
SLTT+ + AFVK RQIT+AIL+ANE +DFW+ + +IKLDIEKAFDK+NW FID +L+ K
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
Query: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
D ++ ++N I+ FE ASG
Subjt: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
LNIN KS+I +NV D+ I SWG + L +YLG PLG P+ ++FW ++++KIQ+ L +W++ +SKGG +T I +TL S+P+ LSVFK P+
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
I + + R F+WNG+S+ NI L+ W+ V +PK GGLG + +N L KWLW+F E +PLWKRLI++KY MG R + S NS
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
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| KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 5.0e-85 | 36.09 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ N DW PIS + L +PF E E+ LKS NK+PGPDGFT++F +KSW +KH + +F DF N +N+ VNET I LI K +SD++PI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
SLTT+ + AFVK RQIT+AIL+ANE +DFW+ + +IKLDIEKAFDK+NW FID +L+ K
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
Query: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
D ++ ++N I+ FE ASG
Subjt: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
LNIN KS+I +NV D+ I SWG + L +YLG PLG P+ ++FW ++++KIQ+ L +W++ +SKGG +T I +TL S+P+ LSVFK P+
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
I + + R F+WNG+S+ NI L+ W+ V +PK GGLG + +N L KWLW+F E +PLWKRLI++KY MG R + S NS
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
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| KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 7.0e-87 | 38.7 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NL+W+PI + L PF EDE+ + S+ K+PGPDGF I F+K W LK +M +F DF++ G++N+N+N TYIALIPK S D+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFI---------------------
SLTTS + AFVK+RQITDAIL+ANE VDFWK + I+KLDIEKAFD +NWDFI
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFI---------------------
Query: -----------------------------------------------------------------------DRILLF-KDNDEVLANFFKIIKAFEQASG
D ILLF +DND L N + FE+ASG
Subjt: -----------------------------------------------------------------------DRILLF-KDNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
L IN KS++ +NVS+ + AS WG + L +SYLG PLG NP FWS+V EKIQ+ L NW++ ISKGG LT I++TLSS+P LSVF+AP
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYK
CK++ K R F+W G++S + L+ W V K GGLG + ++N+ L KWLWR+ E + LW+RLI KYK
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYK
|
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| TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 3.6e-83 | 40.83 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NL+W+PI D + L PF+E+E+ +KS NK+PGPDGF I F+K W LK ++ +F DFFE G++N+N+N TYIALI K S D+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDND-----------
SLTTS + AF+K+RQITDAIL+ANE +D+WK + I+KLDIEKAFD +NW+FID L+ K N+
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDND-----------
Query: -------EVLAN-----FFKIIKAFEQASGLNINFRKSSISGVNVSDDKLVYIASSWGCAPCH-LHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRF
++ N K + Q L++ ++ ++ L + G CH L ++YLG PLG NP FW ++ ++IQ+ L NW++
Subjt: -------EVLAN-----FFKIIKAFEQASGLNINFRKSSISGVNVSDDKLVYIASSWGCAPCH-LHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRF
Query: PYISKGGSLTFIQATLSSIPLDMLSVFKAPQSICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLW
+ISKGG LT I++TLSS+P+ LSVF+AP S K++ KL R F+W GS + L+ W +V PK GGLG + +++NQ L KWLWR+Y E LW
Subjt: PYISKGGSLTFIQATLSSIPLDMLSVFKAPQSICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLW
Query: KRLIMAKYK
+RLI KYK
Subjt: KRLIMAKYK
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein | 2.2e-86 | 36.29 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NLDW PIS + L +PF E E+ LKS NK+PGPDG+ ++F +KSW +K + +F DF I+N+ VNET I LI K +D+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
SLTT+ ++ AFVK RQIT+AIL+ANE +DFW+ + +IKLDIEKAFDK+NW FID +L+ K
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
Query: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
D D+ ++N I+ FE ASG
Subjt: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
LNIN KS+I +NV D+ IA SWG + HL SYLG PLG P+ ++FW +V++KIQ+ L NW++ +SKGG +T I +TL S+P+ +SVFK P+
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
I + + R F+WNG+S+ NI L+ W+ + +PK GGLG + +N L KWLW+F E PLWKRLI++KY MG+ + S NS
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
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| A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein | 7.6e-87 | 36.49 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NLDW PIS + L +PF E E+ LKS NK+PGPDGFT++F +KSW +KH + +F DF N +N+ VNET I LI K +SD+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
SLTT+ + AFVK RQIT+AIL+ANE +DFW+ + +IKLDIEKAFDK+NW FID +L+ K
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
Query: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
D ++ ++N I+ FE ASG
Subjt: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
LNIN KS+I +NV D+ I SWG + L +YLG PLG P+ ++FW ++++KIQ+ L +W++ +SKGG +T I +TL S+P+ LSVFK P+
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
I + + R F+WNG+S+ NI L+ W+ V +PK GGLG + +N L KWLW+F E +PLWKRLI++KY MG R + S NS
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
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| A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein | 2.4e-85 | 36.09 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ N DW PIS + L +PF E E+ LKS NK+PGPDGFT++F +KSW +KH + +F DF N +N+ VNET I LI K +SD++PI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
SLTT+ + AFVK RQIT+AIL+ANE +DFW+ + +IKLDIEKAFDK+NW FID +L+ K
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFK--------------
Query: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
D ++ ++N I+ FE ASG
Subjt: -------------------------------------------------------------------------------DNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
LNIN KS+I +NV D+ I SWG + L +YLG PLG P+ ++FW ++++KIQ+ L +W++ +SKGG +T I +TL S+P+ LSVFK P+
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
I + + R F+WNG+S+ NI L+ W+ V +PK GGLG + +N L KWLW+F E +PLWKRLI++KY MG R + S NS
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYKISPMGACWKRSRPSQYNS
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| A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein | 3.4e-87 | 38.7 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NL+W+PI + L PF EDE+ + S+ K+PGPDGF I F+K W LK +M +F DF++ G++N+N+N TYIALIPK S D+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFI---------------------
SLTTS + AFVK+RQITDAIL+ANE VDFWK + I+KLDIEKAFD +NWDFI
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFI---------------------
Query: -----------------------------------------------------------------------DRILLF-KDNDEVLANFFKIIKAFEQASG
D ILLF +DND L N + FE+ASG
Subjt: -----------------------------------------------------------------------DRILLF-KDNDEVLANFFKIIKAFEQASG
Query: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
L IN KS++ +NVS+ + AS WG + L +SYLG PLG NP FWS+V EKIQ+ L NW++ ISKGG LT I++TLSS+P LSVF+AP
Subjt: LNINFRKSSISGVNVSDDKLVYIASSWGCAPCHLHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQ
Query: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYK
CK++ K R F+W G++S + L+ W V K GGLG + ++N+ L KWLWR+ E + LW+RLI KYK
Subjt: SICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLWKRLIMAKYK
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| A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein | 1.7e-83 | 40.83 | Show/hide |
Query: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
+ NL+W+PI D + L PF+E+E+ +KS NK+PGPDGF I F+K W LK ++ +F DFFE G++N+N+N TYIALI K S D+RPI
Subjt: VSNLDWHPISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPI
Query: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDND-----------
SLTTS + AF+K+RQITDAIL+ANE +D+WK + I+KLDIEKAFD +NW+FID L+ K N+
Subjt: SLTTS-----------------------TKFAFVKHRQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDND-----------
Query: -------EVLAN-----FFKIIKAFEQASGLNINFRKSSISGVNVSDDKLVYIASSWGCAPCH-LHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRF
++ N K + Q L++ ++ ++ L + G CH L ++YLG PLG NP FW ++ ++IQ+ L NW++
Subjt: -------EVLAN-----FFKIIKAFEQASGLNINFRKSSISGVNVSDDKLVYIASSWGCAPCH-LHISYLGSPLGDNPTHTSFWSSVVEKIQRNLENWRF
Query: PYISKGGSLTFIQATLSSIPLDMLSVFKAPQSICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLW
+ISKGG LT I++TLSS+P+ LSVF+AP S K++ KL R F+W GS + L+ W +V PK GGLG + +++NQ L KWLWR+Y E LW
Subjt: PYISKGGSLTFIQATLSSIPLDMLSVFKAPQSICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQVLQIKWLWRFYQEDQPLW
Query: KRLIMAKYK
+RLI KYK
Subjt: KRLIMAKYK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 3.2e-10 | 29.61 | Show/hide |
Query: ISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAK-SSRISDYRPISLTTSTK
++ E++ L RP T E++ + S+ KSPGPDGFT EFY++ + L ++ +F + GI+ + E I LIPK + +++ ++RPISL
Subjt: ISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAK-SSRISDYRPISLTTSTK
Query: FAFVKHRQITDAI------LVANEIVDF------W-----------KCSRSCD---IIIKLDIEKAFDKINWDFIDRILLFKDNDEVLANFFKIIKAFEQ
A + ++ + + I L+ ++ V F W +R+ D +II +D EKAFDKI F+ + L D + + KII+A
Subjt: FAFVKHRQITDAI------LVANEIVDF------W-----------KCSRSCD---IIIKLDIEKAFDKINWDFIDRILLFKDNDEVLANFFKIIKAFEQ
Query: ASGLNI
NI
Subjt: ASGLNI
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| P08548 LINE-1 reverse transcriptase homolog | 1.3e-11 | 28.64 | Show/hide |
Query: ISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKS-SRISDYRPISLTTSTK
+S +++ L RP + E+ ++++ KSPGPDGFT EFY+ + L ++ +F + + GI+ E I LIPK K +R +YRPISL
Subjt: ISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKS-SRISDYRPISLTTSTK
Query: FAFVKHRQITDAI------LVANEIVDF------W--------------KCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDNDEVLANFFKIIKAFEQ
A + ++ +T+ I ++ ++ V F W K +I+ +D EKAFD I F+ R L + F K+I+A
Subjt: FAFVKHRQITDAI------LVANEIVDF------W--------------KCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDNDEVLANFFKIIKAFEQ
Query: ASGLNI
NI
Subjt: ASGLNI
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 2.7e-17 | 33.07 | Show/hide |
Query: WSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQSICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQV
+ ++E++ + WR +S G LT +A LSS+P+ +S PQSI +++L R F+W ++ + LV W V +PK GGLG + N+
Subjt: WSSVVEKIQRNLENWRFPYISKGGSLTFIQATLSSIPLDMLSVFKAPQSICKHVNKLIRGFIWNGSSSDQNIPLVGWDVVAAPKVSGGLGFYKTRISNQV
Query: LQIKWLWRFYQEDQPLWKRLIMAKYKI
L K WR QE LW ++ KY +
Subjt: LQIKWLWRFYQEDQPLWKRLIMAKYKI
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| P11369 LINE-1 retrotransposable element ORF2 protein | 8.0e-09 | 25.7 | Show/hide |
Query: ISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKS-SRISDYRPISLTT---
++ + + L P + E+ + S+ KSPGPDGF+ EFY+ + L + +FH G + + E I LIPK K ++I ++RPISL
Subjt: ISLEDLTFLVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKS-SRISDYRPISLTT---
Query: --STKFAFVKHRQITDAILVANEI-----VDFW--------------KCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDNDEVLANFFKIIKAFEQAS
K + ++ AI+ +++ + W K +II LD EKAFDKI F+ ++L + + + +IKA
Subjt: --STKFAFVKHRQITDAILVANEI-----VDFW--------------KCSRSCDIIIKLDIEKAFDKINWDFIDRILLFKDNDEVLANFFKIIKAFEQAS
Query: GLNINFRKSSISGV
NI + +
Subjt: GLNINFRKSSISGV
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.7e-11 | 29.45 | Show/hide |
Query: LVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPISLTTS-----------
L P T DE+ Q L+ M HNKSPG DG TIEF++ W TL V + F+ G + + ++L+PK I ++RP+SL ++
Subjt: LVRPFTEDEVLQNLKSMGHNKSPGPDGFTIEFYKKSWKTLKHPVMTVFHDFFENGIVNRNVNETYIALIPKTAKSSRISDYRPISLTTS-----------
Query: ---TKFAFVKH---------RQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFI
+ A V H R I D + + +++ F + + + LD EKAFD+++ ++
Subjt: ---TKFAFVKH---------RQITDAILVANEIVDFWKCSRSCDIIIKLDIEKAFDKINWDFI
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