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Lag0024897 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024897
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSphingolipid delta(4)-desaturase DES1-like
Genome locationchr10:6846312..6846791
RNA-Seq ExpressionLag0024897
SyntenyLag0024897
Gene Ontology termsGO:0046513 - ceramide biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042284 - sphingolipid delta-4 desaturase activity (molecular function)
InterPro domainsIPR005804 - Fatty acid desaturase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012427.1 Sphingolipid delta(4)-desaturase DES1-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.9e-7696.45Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQI LDFTMVYFWSWK+FAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

XP_022140225.1 sphingolipid delta(4)-desaturase DES1-like [Momordica charantia]2.2e-7697.16Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQIALDF MVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

XP_022955306.1 sphingolipid delta(4)-desaturase DES1-like [Cucurbita moschata]2.9e-7696.45Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQI LDFTMVYFWSWK+FAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

XP_022994424.1 sphingolipid delta(4)-desaturase DES1-like [Cucurbita maxima]1.4e-7595.74Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQI LDFTMVY WSWK+FAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

XP_023542715.1 sphingolipid delta(4)-desaturase DES1-like [Cucurbita pepo subsp. pepo]2.9e-7696.45Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQI LDFTMVYFWSWK+FAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

TrEMBL top hitse value%identityAlignment
A0A0A0LSB9 Sphingolipid delta(4)-desaturase DES1-like1.0e-7494.33Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQIALD  MVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APE+YNELDSYKSWSQVIYMYIMD+TVGPFSRMKRM +KSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

A0A5D3DSS5 Sphingolipid delta(4)-desaturase DES1-like1.0e-7494.33Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQIALD  MVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APE+YNELDSYKSWSQVIYMYIMD+TVGPFSRMKRM +KSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

A0A6J1CEI0 Sphingolipid delta(4)-desaturase DES1-like1.1e-7697.16Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQIALDF MVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

A0A6J1GTF2 Sphingolipid delta(4)-desaturase DES1-like1.4e-7696.45Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQI LDFTMVYFWSWK+FAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

A0A6J1K2T6 Sphingolipid delta(4)-desaturase DES1-like6.9e-7695.74Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEFINFIIQI LDFTMVY WSWK+FAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRM KKSE
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

SwissProt top hitse value%identityAlignment
O09005 Sphingolipid delta(4)-desaturase DES11.3e-3953.33Show/hide
Query:  EFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEFYN
        E IN +IQI  D  + Y +  KS  Y++ +T +G G+HP++GHFI+EHY+F    ETYSYYGPLNLLT++VGYHNEHHDFP +PG  L  V++IA E+Y+
Subjt:  EFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEFYN

Query:  ELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        +L  Y SW +V+Y ++ D T+ P+SRMKR  K +E
Subjt:  ELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

Q5F3C1 Sphingolipid delta(4)-desaturase DES11.3e-3954.55Show/hide
Query:  EFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEFYN
        E IN + Q+  D  + Y W  KS  Y++  + +G G+HP++GHFI+EHY+F    ETYSYYGPLNLLT++VGYHNEHHDFP IPG  L  VK+IA E+Y+
Subjt:  EFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEFYN

Query:  ELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGK
         L  Y SW +V+Y ++MD T+ P+SRMKR  K
Subjt:  ELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGK

Q6H5U3 Sphingolipid delta(4)-desaturase DES1-like6.7e-6882.98Show/hide
Query:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI
        K PG WEF N IIQIALD +MVYF+ WKS AYLILSTFVGGGMHPMAGHFISEHYVFNP QETYSYYGPLNL+TW VGYHNEHHDFPRIPG++LYKV+EI
Subjt:  KAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEI

Query:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        APE+YN L SYKSWSQVIYMYIMD+TVGPFSRMKR   K +
Subjt:  APEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

Q6UQ04 Sphingolipid delta(4)-desaturase DES17.7e-4054.07Show/hide
Query:  EFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEFYN
        E IN + QI LD  + Y +  KS  Y++ ++ +G G+HP++GHFI+EHY+F    ETYSYYGPLNLLT++VGYHNEHHDFP +PG  L  V++IA E+Y+
Subjt:  EFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLYKVKEIAPEFYN

Query:  ELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
        +L  Y SW +V+Y ++MD T+ P+SRMKR  K SE
Subjt:  ELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

Q9ZPH4 Sphingolipid delta(4)-desaturase DES1-like1.1e-6579.45Show/hide
Query:  IVSQTKAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLY
        I  + K PG WEFINF+IQI LD ++V F+ W+SFAYLILSTFVGGGMHPMAGHFISEHYVFNP QETYSYYGPLNLLTWSVGYHNEHHDFPRIPG+KL+
Subjt:  IVSQTKAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLY

Query:  KVKEIAPEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
         VKEIA E+Y  L+SYKSWSQVIYMYIMD TVGP+SRMKR   KS+
Subjt:  KVKEIAPEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE

Arabidopsis top hitse value%identityAlignment
AT4G04930.1 fatty acid desaturase family protein7.6e-6779.45Show/hide
Query:  IVSQTKAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLY
        I  + K PG WEFINF+IQI LD ++V F+ W+SFAYLILSTFVGGGMHPMAGHFISEHYVFNP QETYSYYGPLNLLTWSVGYHNEHHDFPRIPG+KL+
Subjt:  IVSQTKAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGSKLY

Query:  KVKEIAPEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE
         VKEIA E+Y  L+SYKSWSQVIYMYIMD TVGP+SRMKR   KS+
Subjt:  KVKEIAPEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTCTTCCAACTCTTCTTCTATGCTCTTCGTCCATTGTTTCTCAAACCAAAGCCCCAGGCTCCTGGGAGTTCATCAACTTCATCATTCAGATAGCTCTTGATTT
CACCATGGTTTACTTTTGGAGCTGGAAGTCTTTTGCTTATCTGATCCTCTCCACATTCGTCGGTGGCGGGATGCATCCGATGGCTGGTCACTTCATTTCTGAACATTACG
TCTTCAATCCCAAACAGGAGACCTACTCTTACTATGGTCCGCTTAATCTTCTAACATGGAGTGTGGGTTACCACAATGAACACCATGATTTCCCCAGGATTCCAGGAAGC
AAGCTTTACAAGGTGAAGGAGATTGCACCTGAATTCTACAACGAATTAGATTCATATAAATCATGGAGCCAGGTGATATACATGTACATTATGGACAGGACAGTGGGGCC
ATTCAGTCGGATGAAGAGAATGGGAAAGAAATCCGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTCTTCCAACTCTTCTTCTATGCTCTTCGTCCATTGTTTCTCAAACCAAAGCCCCAGGCTCCTGGGAGTTCATCAACTTCATCATTCAGATAGCTCTTGATTT
CACCATGGTTTACTTTTGGAGCTGGAAGTCTTTTGCTTATCTGATCCTCTCCACATTCGTCGGTGGCGGGATGCATCCGATGGCTGGTCACTTCATTTCTGAACATTACG
TCTTCAATCCCAAACAGGAGACCTACTCTTACTATGGTCCGCTTAATCTTCTAACATGGAGTGTGGGTTACCACAATGAACACCATGATTTCCCCAGGATTCCAGGAAGC
AAGCTTTACAAGGTGAAGGAGATTGCACCTGAATTCTACAACGAATTAGATTCATATAAATCATGGAGCCAGGTGATATACATGTACATTATGGACAGGACAGTGGGGCC
ATTCAGTCGGATGAAGAGAATGGGAAAGAAATCCGAGTAG
Protein sequenceShow/hide protein sequence
MGCLPTLLLCSSSIVSQTKAPGSWEFINFIIQIALDFTMVYFWSWKSFAYLILSTFVGGGMHPMAGHFISEHYVFNPKQETYSYYGPLNLLTWSVGYHNEHHDFPRIPGS
KLYKVKEIAPEFYNELDSYKSWSQVIYMYIMDRTVGPFSRMKRMGKKSE