; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0024909 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024909
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:6911825..6913041
RNA-Seq ExpressionLag0024909
SyntenyLag0024909
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ10307.1 uncharacterized protein Pyn_17609 [Prunus yedoensis var. nudiflora]7.8e-3329.8Show/hide
Query:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF
        ++VE  DI+D+    K S++ K+ TT   + EAF   M +IW     V ++  G N++L  F    D++++ R GPW++D A++++E P G         
Subjt:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF

Query:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE
        KY  F I  H +P  C        +GNS+G  +      +G   G  LR++V ++V +P  RG  + T       ++   YE+LP+FC+ CG++GHVF+E
Subjt:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE

Query:  CG--EEGIEKSDEQPFGVEMRETK--GSKGIYKTWNTDNRGYSNFQRGRGREGRG
        C   ++  +++ E+P+G+ ++ TK   S     +      G + +   +G++ RG
Subjt:  CG--EEGIEKSDEQPFGVEMRETK--GSKGIYKTWNTDNRGYSNFQRGRGREGRG

TXG64850.1 hypothetical protein EZV62_011844 [Acer yangbiense]7.8e-3337.63Show/hide
Query:  IICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFC
        I+ K+LT++ +  E F   M +IW V G V IE    NI+   F   +D++R+ RGGPWS+D A++I +EPTG+ ++ N  F YV F +  H LP +C  
Subjt:  IICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFC

Query:  RKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQECGEE
         +  I LG+ IGE    +S       G  +RV+V + V++P +R   V      + S + + YE+L D+C+ CG+LGH+  EC E+
Subjt:  RKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQECGEE

TXG72599.1 hypothetical protein EZV62_001178 [Acer yangbiense]7.8e-3334.76Show/hide
Query:  VVEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFD
        V+E+ ++ + D   +    ++ K+LT K I+ EAF   + +IW   G V++E  G+N+++  F    D+ R+ R GPW + ++++ +E+ +G  NV N +
Subjt:  VVEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFD

Query:  FKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQ
        F    F I  H +P +C  R+ A  L   IGE V   S E+ +  G  LRVKV++++ +P KR   +K G+  E   + + YE+LP+FCY CG++GH  +
Subjt:  FKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQ

Query:  ECGEEGIEKS
        ECG+E   K+
Subjt:  ECGEEGIEKS

VVA32948.1 PREDICTED: DUF4283 domain-containing [Prunus dulcis]1.3e-3532.69Show/hide
Query:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF
        ++V  +DI+D+    K S++ K+LTT A + EAF   M +IW     V ++  G N++L  F    D++R+ R GPW++D A++++E P GS        
Subjt:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF

Query:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE
        KY  F I  H +P  C        +GNS G  +      +GK  G  LR++V V+V +P +RG  + T       +++  YE+LP+FC+ CG+LGHVF+E
Subjt:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE

Query:  CG--EEGIEKSDEQPFGVEMRETKGSKGIYKTWNTDNRGYSNFQRGRGREGRGRWGKSSK
        C   ++  +++DE+P+G  ++ TK    I         G      G G E  G   K  +
Subjt:  CG--EEGIEKSDEQPFGVEMRETKGSKGIYKTWNTDNRGYSNFQRGRGREGRGRWGKSSK

XP_024953751.1 uncharacterized protein LOC112498094 [Citrus sinensis]4.6e-3332.75Show/hide
Query:  IICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFC
        +I K++ T+ +S E     M R+W     VKIE  G+NI++  F    DK  I  GGPW +D A++++ EP G  +V+  DF + SF +  H +P +C  
Subjt:  IICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFC

Query:  RKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSW-IQVTYEKLPDFCYFCGKLGHVFQECGEEGIEKSDEQPFGVE
        ++   ALG +IG+    E+D  G+  G+ LR+++ V++  P K+   ++   +AE+   +QV YE+LPDFC+ CG++GH ++EC     +  DE  +G  
Subjt:  RKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSW-IQVTYEKLPDFCYFCGKLGHVFQECGEEGIEKSDEQPFGVE

Query:  MRET------KGSKGIYKTWNTDNRGYSN
        ++ +      K S+G  +  +  N+ ++N
Subjt:  MRET------KGSKGIYKTWNTDNRGYSN

TrEMBL top hitse value%identityAlignment
A0A314YVX1 CCHC-type domain-containing protein3.8e-3329.8Show/hide
Query:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF
        ++VE  DI+D+    K S++ K+ TT   + EAF   M +IW     V ++  G N++L  F    D++++ R GPW++D A++++E P G         
Subjt:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF

Query:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE
        KY  F I  H +P  C        +GNS+G  +      +G   G  LR++V ++V +P  RG  + T       ++   YE+LP+FC+ CG++GHVF+E
Subjt:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE

Query:  CG--EEGIEKSDEQPFGVEMRETK--GSKGIYKTWNTDNRGYSNFQRGRGREGRG
        C   ++  +++ E+P+G+ ++ TK   S     +      G + +   +G++ RG
Subjt:  CG--EEGIEKSDEQPFGVEMRETK--GSKGIYKTWNTDNRGYSNFQRGRGREGRG

A0A5C7H9Y2 CCHC-type domain-containing protein6.4e-3332.84Show/hide
Query:  SIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCF
        S+I K +T K I+ EAF   +  IW  K  V +E  G NI+   F+   D+ RI  GGPW +D  +L++ E +GS  V +  F+YV F I  H LP  C 
Subjt:  SIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCF

Query:  CRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQEC--GEEGIEKSDEQPFG
         R+  + LG  +G+    ++ E+G+  G+ +R++V ++V  P KRG  V  G   + + + + YE+LP+FCY+CGK+GH+ ++C    + I  S    FG
Subjt:  CRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQEC--GEEGIEKSDEQPFG

Query:  VEMRETK--GSKGIYKTWNTD----NRGYSNFQRGRGREGRGRWGKSSKKSTKISKIVLGKEGMKETIKTE
          MR      SKG  +  N+       G S+       +G  +W      S      VL ++G +  + TE
Subjt:  VEMRETK--GSKGIYKTWNTD----NRGYSNFQRGRGREGRGRWGKSSKKSTKISKIVLGKEGMKETIKTE

A0A5C7I6E5 CCHC-type domain-containing protein3.8e-3337.63Show/hide
Query:  IICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFC
        I+ K+LT++ +  E F   M +IW V G V IE    NI+   F   +D++R+ RGGPWS+D A++I +EPTG+ ++ N  F YV F +  H LP +C  
Subjt:  IICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFC

Query:  RKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQECGEE
         +  I LG+ IGE    +S       G  +RV+V + V++P +R   V      + S + + YE+L D+C+ CG+LGH+  EC E+
Subjt:  RKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQECGEE

A0A5C7IU01 CCHC-type domain-containing protein3.8e-3334.76Show/hide
Query:  VVEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFD
        V+E+ ++ + D   +    ++ K+LT K I+ EAF   + +IW   G V++E  G+N+++  F    D+ R+ R GPW + ++++ +E+ +G  NV N +
Subjt:  VVEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFD

Query:  FKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQ
        F    F I  H +P +C  R+ A  L   IGE V   S E+ +  G  LRVKV++++ +P KR   +K G+  E   + + YE+LP+FCY CG++GH  +
Subjt:  FKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQ

Query:  ECGEEGIEKS
        ECG+E   K+
Subjt:  ECGEEGIEKS

A0A5E4G034 PREDICTED: DUF4283 domain-containing6.2e-3632.69Show/hide
Query:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF
        ++V  +DI+D+    K S++ K+LTT A + EAF   M +IW     V ++  G N++L  F    D++R+ R GPW++D A++++E P GS        
Subjt:  VEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDF

Query:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE
        KY  F I  H +P  C        +GNS G  +      +GK  G  LR++V V+V +P +RG  + T       +++  YE+LP+FC+ CG+LGHVF+E
Subjt:  KYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQE

Query:  CG--EEGIEKSDEQPFGVEMRETKGSKGIYKTWNTDNRGYSNFQRGRGREGRGRWGKSSK
        C   ++  +++DE+P+G  ++ TK    I         G      G G E  G   K  +
Subjt:  CG--EEGIEKSDEQPFGVEMRETKGSKGIYKTWNTDNRGYSNFQRGRGREGRGRWGKSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding5.6e-0524.84Show/hide
Query:  FRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFK
        F+  +    I R GPWS++D + +I+  T   +  + +FK + F I    +P     R     +  SIGE                             +
Subjt:  FRRIKDKVRITRGGPWSYDDAVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFK

Query:  RGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQEC---GEEGIEKSDE
         G  ++T    + S ++  YEKL +FC  CG L H   EC   G +G    D+
Subjt:  RGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQEC---GEEGIEKSDE

AT5G36228.1 nucleic acid binding;zinc ion binding1.3e-0923.4Show/hide
Query:  SIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEE----PTGSCNVENFDFKYVSFLIHFHKLP
        S++ +IL  +  S E     +P  WG+   V      +  +   FR   D +   R  PW +++  + ++     PT     E+F   ++   +H   +P
Subjt:  SIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDDAVLIIEE----PTGSCNVENFDFKYVSFLIHFHKLP

Query:  HVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQEC
              +    + +++GE VA + +E    +   +RVKV+++  EP +    V+  S+ E++ I   YEKL   C  C ++ H    C
Subjt:  HVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFCGKLGHVFQEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATGGACGAAGGGGGCAACCAGATGGTTTGCGGAATGGAGAAGGAAGAAGACTGCACTGGAAAATTTACAGGAAAGAGAGTCGTAGAAGTAGAAGATGATGACAT
CGAAGATTTGCACAGAGAATTTAAGAGCTCGATAATATGCAAGATACTTACGACAAAGGCTATAAGCCCTGAAGCTTTCTCGTACTTTATGCCTCGAATATGGGGAGTAA
AAGGCTGGGTTAAAATAGAAAAAGCTGGAAACAATATATACCTATGCAACTTCAGAAGGATAAAGGACAAAGTGAGAATCACAAGAGGCGGACCATGGTCTTATGACGAT
GCAGTTCTGATCATTGAAGAACCAACAGGGAGTTGCAATGTTGAGAATTTTGATTTTAAATATGTTTCTTTTTTGATCCATTTTCATAAACTCCCACATGTGTGTTTTTG
CAGGAAATATGCAATAGCTCTGGGGAACTCCATAGGAGAATTTGTAGCAGCCGAATCAGATGAAAATGGAAAAATGGAAGGAGAAACTCTAAGGGTGAAGGTCAAAGTTA
ATGTGGAGGAGCCTTTTAAAAGAGGAACAAATGTCAAAACAGGGTCAAAGGCAGAAAAATCGTGGATTCAAGTCACATATGAAAAGCTTCCTGACTTCTGTTACTTCTGT
GGGAAGCTAGGACATGTTTTTCAAGAGTGTGGCGAAGAAGGAATTGAGAAATCTGATGAGCAACCTTTCGGGGTAGAAATGCGAGAAACAAAGGGCAGCAAAGGAATATA
TAAAACTTGGAATACTGATAACAGAGGCTACTCTAATTTCCAGAGGGGACGGGGCAGGGAAGGCCGTGGAAGATGGGGAAAAAGTTCAAAGAAGAGTACAAAAATTTCAA
AAATAGTTCTGGGGAAGGAGGGAATGAAAGAAACTATAAAAACAGAAAGCACCAAAACAAAGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTATGGACGAAGGGGGCAACCAGATGGTTTGCGGAATGGAGAAGGAAGAAGACTGCACTGGAAAATTTACAGGAAAGAGAGTCGTAGAAGTAGAAGATGATGACAT
CGAAGATTTGCACAGAGAATTTAAGAGCTCGATAATATGCAAGATACTTACGACAAAGGCTATAAGCCCTGAAGCTTTCTCGTACTTTATGCCTCGAATATGGGGAGTAA
AAGGCTGGGTTAAAATAGAAAAAGCTGGAAACAATATATACCTATGCAACTTCAGAAGGATAAAGGACAAAGTGAGAATCACAAGAGGCGGACCATGGTCTTATGACGAT
GCAGTTCTGATCATTGAAGAACCAACAGGGAGTTGCAATGTTGAGAATTTTGATTTTAAATATGTTTCTTTTTTGATCCATTTTCATAAACTCCCACATGTGTGTTTTTG
CAGGAAATATGCAATAGCTCTGGGGAACTCCATAGGAGAATTTGTAGCAGCCGAATCAGATGAAAATGGAAAAATGGAAGGAGAAACTCTAAGGGTGAAGGTCAAAGTTA
ATGTGGAGGAGCCTTTTAAAAGAGGAACAAATGTCAAAACAGGGTCAAAGGCAGAAAAATCGTGGATTCAAGTCACATATGAAAAGCTTCCTGACTTCTGTTACTTCTGT
GGGAAGCTAGGACATGTTTTTCAAGAGTGTGGCGAAGAAGGAATTGAGAAATCTGATGAGCAACCTTTCGGGGTAGAAATGCGAGAAACAAAGGGCAGCAAAGGAATATA
TAAAACTTGGAATACTGATAACAGAGGCTACTCTAATTTCCAGAGGGGACGGGGCAGGGAAGGCCGTGGAAGATGGGGAAAAAGTTCAAAGAAGAGTACAAAAATTTCAA
AAATAGTTCTGGGGAAGGAGGGAATGAAAGAAACTATAAAAACAGAAAGCACCAAAACAAAGACTTAG
Protein sequenceShow/hide protein sequence
MTMDEGGNQMVCGMEKEEDCTGKFTGKRVVEVEDDDIEDLHREFKSSIICKILTTKAISPEAFSYFMPRIWGVKGWVKIEKAGNNIYLCNFRRIKDKVRITRGGPWSYDD
AVLIIEEPTGSCNVENFDFKYVSFLIHFHKLPHVCFCRKYAIALGNSIGEFVAAESDENGKMEGETLRVKVKVNVEEPFKRGTNVKTGSKAEKSWIQVTYEKLPDFCYFC
GKLGHVFQECGEEGIEKSDEQPFGVEMRETKGSKGIYKTWNTDNRGYSNFQRGRGREGRGRWGKSSKKSTKISKIVLGKEGMKETIKTESTKTKT