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Lag0024913 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024913
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein LOL2
Genome locationchr10:6928523..6932855
RNA-Seq ExpressionLag0024913
SyntenyLag0024913
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR005735 - Zinc finger, LSD1-type
IPR040319 - LSD1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146601.1 protein LOL2 isoform X2 [Cucumis sativus]2.8e-6189.63Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        M+VHEIEKDEDDGPPPGWEPITP LP PPPP LS     +DMAQMVCG+CRRLLKYLKGARYVQCSCCSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCTSVTEIGVHNRRPPWSV QGQAA PTNFV
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

XP_008442535.1 PREDICTED: protein LOL2 isoform X3 [Cucumis melo]1.1e-6090.37Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        M+VHEIEKDEDDGPPPGWEPITP LP PP P LS    PADMAQMVCG+CRRLLKYLKGARYVQCS CSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCTSVTEIGVHNRRPPWSVQQGQAA PTNFV
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

XP_011653178.1 protein LOL2 isoform X1 [Cucumis sativus]2.1e-6190.37Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        M+VHEIEKDEDDGPPPGWEPITP LP PPPP LS     ADMAQMVCG+CRRLLKYLKGARYVQCSCCSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCTSVTEIGVHNRRPPWSV QGQAA PTNFV
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

XP_022927005.1 protein LOL2 [Cucurbita moschata]3.3e-6290.37Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        ME+HEIEKDEDDGPPPGWEPITPPLP PPP PLS     +DMAQMVCG+CRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCT VTEIGVHNRRPPWSVQQGQAA PTN V
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

XP_023001758.1 protein LOL2 [Cucurbita maxima]2.8e-6189.63Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        ME+HEIEKDEDDGPPPGWEPITPPLP  PP PLS     +DMAQMVCG+CRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCT VTEIGVHNRRPPWSVQQGQAA PTN V
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

TrEMBL top hitse value%identityAlignment
A0A0A0LXE3 Uncharacterized protein1.3e-6189.63Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        M+VHEIEKDEDDGPPPGWEPITP LP PPPP LS     +DMAQMVCG+CRRLLKYLKGARYVQCSCCSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCTSVTEIGVHNRRPPWSV QGQAA PTNFV
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

A0A1S3B6K2 protein LOL2 isoform X35.1e-6190.37Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        M+VHEIEKDEDDGPPPGWEPITP LP PP P LS    PADMAQMVCG+CRRLLKYLKGARYVQCS CSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCTSVTEIGVHNRRPPWSVQQGQAA PTNFV
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

A0A5D3DST5 Protein LOL2 isoform X35.1e-6190.37Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        M+VHEIEKDEDDGPPPGWEPITP LP PP P LS    PADMAQMVCG+CRRLLKYLKGARYVQCS CSTVN+VLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCTSVTEIGVHNRRPPWSVQQGQAA PTNFV
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

A0A6J1EMN3 protein LOL21.6e-6290.37Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        ME+HEIEKDEDDGPPPGWEPITPPLP PPP PLS     +DMAQMVCG+CRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCT VTEIGVHNRRPPWSVQQGQAA PTN V
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

A0A6J1KRG9 protein LOL21.3e-6189.63Show/hide
Query:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
        ME+HEIEKDEDDGPPPGWEPITPPLP  PP PLS     +DMAQMVCG+CRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS
Subjt:  MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASS

Query:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV
        VRCSSCT VTEIGVHNRRPPWSVQQGQAA PTN V
Subjt:  VRCSSCTSVTEIGVHNRRPPWSVQQGQAAHPTNFV

SwissProt top hitse value%identityAlignment
O65426 Protein LOL25.1e-3458.46Show/hide
Query:  EIEKDEDDGPPPGWEPITPPLPPP--------PPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPY
        E E++E++GPPPGWE  +  LPPP         P P + E    + AQMVCGSCRRLL YL+G+++V+CS C TVN VLEA++VGQV C +C +LLMYPY
Subjt:  EIEKDEDDGPPPGWEPITPPLPPP--------PPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPY

Query:  GASSVRCSSCTSVTEIGVHNRRPPWSVQQG
        GA +VRCSSC SVT+I  +N+RPPWS QQG
Subjt:  GASSVRCSSCTSVTEIGVHNRRPPWSVQQG

P94077 Protein LSD13.0e-1846.08Show/hide
Query:  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRR
        PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N R
Subjt:  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRR

Query:  PP
         P
Subjt:  PP

Q0J7V9 Protein LSD17.2e-2057.53Show/hide
Query:  DMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        +MAQ+VCG C  LL Y++GA  VQCSCC TVN  +EA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  DMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

Q704V3 Protein LOL51.8e-2657.27Show/hide
Query:  PGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVH
        P  +   P +PPPP P L+ E     + QMVCGSCR LL Y +GA YV C+CC T+NYVLEAHEVG+V CG CA LLMYP+GA +V+CS C  VTEIG  
Subjt:  PGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVH

Query:  NRRPPWSVQQ
        N R   S++Q
Subjt:  NRRPPWSVQQ

Q93ZB1 Protein LOL12.7e-1954.76Show/hide
Query:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP        +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

Arabidopsis top hitse value%identityAlignment
AT1G32540.1 lsd one like 11.9e-2054.76Show/hide
Query:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP        +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT1G32540.2 lsd one like 11.9e-2054.76Show/hide
Query:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP        +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT1G32540.3 lsd one like 11.9e-2054.76Show/hide
Query:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG
        PPP        +MAQ+VCG C  LL Y++GA  VQCSCC TVN  LEA++V  V CG+C +LLMY YGA SV+C+ C  VT +G
Subjt:  PPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIG

AT4G20380.2 LSD1 zinc finger family protein2.1e-1946.08Show/hide
Query:  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRR
        PPPPP      P DMA ++CG CR +L Y +GA  V+CSCC T N V           + +V Q+ CG C   LMYPYGASSV+C+ C  VT + + N R
Subjt:  PPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYV---------LEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVTEIGVHNRR

Query:  PP
         P
Subjt:  PP

AT4G21610.1 lsd one like 23.6e-3558.46Show/hide
Query:  EIEKDEDDGPPPGWEPITPPLPPP--------PPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPY
        E E++E++GPPPGWE  +  LPPP         P P + E    + AQMVCGSCRRLL YL+G+++V+CS C TVN VLEA++VGQV C +C +LLMYPY
Subjt:  EIEKDEDDGPPPGWEPITPPLPPP--------PPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPY

Query:  GASSVRCSSCTSVTEIGVHNRRPPWSVQQG
        GA +VRCSSC SVT+I  +N+RPPWS QQG
Subjt:  GASSVRCSSCTSVTEIGVHNRRPPWSVQQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTCATGAAATCGAGAAAGACGAAGACGACGGACCTCCTCCCGGATGGGAACCTATCACTCCGCCGCTGCCGCCACCACCACCGCCGCCACTTTCTTGTGAGTG
CTTCCCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAGTGCTCTTGCTGTTCAACAGTCAACTATG
TGTTAGAAGCTCACGAGGTTGGACAAGTTAAATGTGGTTCTTGTGCAGTGTTGCTTATGTACCCGTATGGAGCATCGTCAGTTAGGTGTTCCTCGTGTACTAGTGTGACA
GAAATCGGGGTGCATAACAGGCGCCCACCATGGTCTGTTCAGCAGGGGCAAGCAGCCCATCCTACCAACTTTGTCCACCTTCATCAGCACGCAGATAAGGAAAATAACAT
TAGCATTACTGTTTATTTCTTAGGTACAGAGGGTTCCATGAATGACCAAAAAAGCTTAACAGAGATGATGCAATCCTTGGAAATGAAGACAACTTCAGAATTCATAGAGA
TCGGCAGAATTGTTAAAGAGGCAAAAGCAGCTACAGCTCTAAGGCCAGCAATTAAAATTAAGGAAATGGCCTTTAACGCTCAATTCAGTATTGCAAATTACATTCTACAC
TATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTCATGAAATCGAGAAAGACGAAGACGACGGACCTCCTCCCGGATGGGAACCTATCACTCCGCCGCTGCCGCCACCACCACCGCCGCCACTTTCTTGTGAGTG
CTTCCCAGCTGATATGGCACAAATGGTCTGTGGTTCCTGCCGTCGCCTGCTTAAGTATTTAAAGGGAGCCAGATATGTTCAGTGCTCTTGCTGTTCAACAGTCAACTATG
TGTTAGAAGCTCACGAGGTTGGACAAGTTAAATGTGGTTCTTGTGCAGTGTTGCTTATGTACCCGTATGGAGCATCGTCAGTTAGGTGTTCCTCGTGTACTAGTGTGACA
GAAATCGGGGTGCATAACAGGCGCCCACCATGGTCTGTTCAGCAGGGGCAAGCAGCCCATCCTACCAACTTTGTCCACCTTCATCAGCACGCAGATAAGGAAAATAACAT
TAGCATTACTGTTTATTTCTTAGGTACAGAGGGTTCCATGAATGACCAAAAAAGCTTAACAGAGATGATGCAATCCTTGGAAATGAAGACAACTTCAGAATTCATAGAGA
TCGGCAGAATTGTTAAAGAGGCAAAAGCAGCTACAGCTCTAAGGCCAGCAATTAAAATTAAGGAAATGGCCTTTAACGCTCAATTCAGTATTGCAAATTACATTCTACAC
TATTGA
Protein sequenceShow/hide protein sequence
MEVHEIEKDEDDGPPPGWEPITPPLPPPPPPPLSCECFPADMAQMVCGSCRRLLKYLKGARYVQCSCCSTVNYVLEAHEVGQVKCGSCAVLLMYPYGASSVRCSSCTSVT
EIGVHNRRPPWSVQQGQAAHPTNFVHLHQHADKENNISITVYFLGTEGSMNDQKSLTEMMQSLEMKTTSEFIEIGRIVKEAKAATALRPAIKIKEMAFNAQFSIANYILH
Y