| GenBank top hits | e value | %identity | Alignment |
|---|
| CAB4262994.1 unnamed protein product [Prunus armeniaca] | 8.2e-31 | 28 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
GLGFRD+E FNQALL KQC CI+Q P SL+ + R +Y P + FLEA +G+ PSF+WRSL WG+ WL S
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
Query: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVES-------------GQDSCVV---------VWPLEAE
P LP + V DLF +SG WN +LK F + + EAIL+IPL + + V+S G+ S V +W L+
Subjt: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVES-------------GQDSCVV---------VWPLEAE
Query: -----CAWTASICSGTVLWLKVCGCA-----PSLPHSVGHSLNSDGRDLWAF---------------ANDDLSVFHVGGRRCLAGD----------SLQA
W C T L VC + L ++V S + + L+A+ A + + + LA + S
Subjt: -----CAWTASICSGTVLWLKVCGCA-----PSLPHSVGHSLNSDGRDLWAF---------------ANDDLSVFHVGGRRCLAGD----------SLQA
Query: RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVETESLRLPWDNNK
+ Q VWRPP G K+NVD +++ G G V+R +G+ FMAAC+ +Q + E A +G++ A +GF D V+E ++
Subjt: RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVETESLRLPWDNNK
Query: VLFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLRTGFEAMRLCS
H++ S + VD + +EE S +++ G + CS
Subjt: VLFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLRTGFEAMRLCS
|
|
| VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis] | 4.3e-32 | 27.7 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
GLGFRD+E FNQALLAKQCW IL+ P SL+ + R +Y P FLEA +G+ PSF+WRSL WG+ WL S
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
Query: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVESG-QDSCV---------------------VVWPLEA-
P LP + V DLF +SG WN +LK F + + +A L+IPL + + V+SG + +C+ +W L+
Subjt: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVESG-QDSCV---------------------VVWPLEA-
Query: --------ECAWTASICSGTVLWLKVCGCAPSLPH------SVGHS------------------------------------LNSDGRDLWAFANDDLSV
CAW C G +L+ + P P+ SV H+ L+S G + FA +
Subjt: --------ECAWTASICSGTVLWLKVCGCAPSLPH------SVGHS------------------------------------LNSDGRDLWAFANDDLSV
Query: FHVGGRRCLAGDSLQA---------------------------RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQ
++ G S A + Q WRPPPAG K+NVD +V+ G G V+R A+GE FMAAC+ +Q
Subjt: FHVGGRRCLAGDSLQA---------------------------RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQ
Query: RCWSVDLAEGWAMYKGVQLARQLGFADFVVE-----------------------TESLRLPWDNNKVL---FSPRQGNRVAHALASLAFSYVDRV-WLEE
+ E A +G++ A +GF V+E E + N + + ++PR GN+VAH LA AF + V W+EE
Subjt: RCWSVDLAEGWAMYKGVQLARQLGFADFVVE-----------------------TESLRLPWDNNKVL---FSPRQGNRVAHALASLAFSYVDRV-WLEE
Query: GPSEISDVL
P + VL
Subjt: GPSEISDVL
|
|
| XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis] | 5.7e-32 | 30.49 | Show/hide |
Query: LGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SVP
LGFRD+ FNQAL+AKQ W I+Q P SLL V++ +YF S F+EA +GS PS++WRS+LWGR WL S P
Subjt: LGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SVP
Query: LLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPLQHGPTFYVESGQDSCVVVWPLEAECAWTASICSGTVLWLKVCGCAPSLPHSVGHSLNSDG
LP TVS L W ++ HF++ D ILKIPL P+ V+W + + + S+ SG L L++ P+ P S + +G
Subjt: LLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPLQHGPTFYVESGQDSCVVVWPLEAECAWTASICSGTVLWLKVCGCAPSLPHSVGHSLNSDG
Query: RDLWAFA---------NDDLSVFHVGGRRCLAGD-------SLQA----RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAA
+ W+ + S V G + LQA L QE W PPAG K+NVDA+V+ + G G V+R ++G++ AA
Subjt: RDLWAFA---------NDDLSVFHVGGRRCLAGD-------SLQA----RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAA
Query: CLGLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVETESLRLP--------------W------------DNNKVLFSPRQGNRVAHALASLAFSYVDRV
+ +D AE A G+++A G +VET+S + W + K+ PR N AH LA LA +Y D V
Subjt: CLGLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVETESLRLP--------------W------------DNNKVLFSPRQGNRVAHALASLAFSYVDRV
Query: -WLEEGPSEI
W + P+ +
Subjt: -WLEEGPSEI
|
|
| XP_039791740.1 uncharacterized protein LOC120657488 isoform X1 [Panicum virgatum] | 1.1e-30 | 28.76 | Show/hide |
Query: MDGLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGRGSWLGSVPLLPAACTVSDLFAASGGWNKGMLKAH
M G+GFRDM++FNQA+L KQ W IL P+SL VL+G+YFP F +A SF WRS+++ A+G WN+ M++A
Subjt: MDGLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGRGSWLGSVPLLPAACTVSDLFAASGGWNKGMLKAH
Query: FNESDYEAILKIPLQHGPT--------FYVESGQDSCVVVWPLEAECAWTA--SICSGTVLWLKVCGCAPSLPHSVGHSLNSDGRDLWAFANDDLSVFHV
FNE D E IL+IPL H P E+ +D V+ + W + ++ +G + P S+ A A ++ + HV
Subjt: FNESDYEAILKIPLQHGPT--------FYVESGQDSCVVVWPLEAECAWTA--SICSGTVLWLKVCGCAPSLPHSVGHSLNSDGRDLWAFANDDLSVFHV
Query: ---GGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSVDLAEGWAMYKGVQLARQLGFADF
+RC + S+ W PPP G L LNVDA++ N G G V+R+ DG+ MA C + R ++AE A+ V A++
Subjt: ---GGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSVDLAEGWAMYKGVQLARQLGFADF
Query: VVETESLRL-------PWDNNKV------------------LFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVL
VV ++ + D ++V ++ R N AH +A LA + + VW E P I +L
Subjt: VVETESLRL-------PWDNNKV------------------LFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVL
|
|
| XP_039791741.1 uncharacterized protein LOC120657488 isoform X2 [Panicum virgatum] | 1.1e-30 | 28.76 | Show/hide |
Query: MDGLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGRGSWLGSVPLLPAACTVSDLFAASGGWNKGMLKAH
M G+GFRDM++FNQA+L KQ W IL P+SL VL+G+YFP F +A SF WRS+++ A+G WN+ M++A
Subjt: MDGLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGRGSWLGSVPLLPAACTVSDLFAASGGWNKGMLKAH
Query: FNESDYEAILKIPLQHGPT--------FYVESGQDSCVVVWPLEAECAWTA--SICSGTVLWLKVCGCAPSLPHSVGHSLNSDGRDLWAFANDDLSVFHV
FNE D E IL+IPL H P E+ +D V+ + W + ++ +G + P S+ A A ++ + HV
Subjt: FNESDYEAILKIPLQHGPT--------FYVESGQDSCVVVWPLEAECAWTA--SICSGTVLWLKVCGCAPSLPHSVGHSLNSDGRDLWAFANDDLSVFHV
Query: ---GGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSVDLAEGWAMYKGVQLARQLGFADF
+RC + S+ W PPP G L LNVDA++ N G G V+R+ DG+ MA C + R ++AE A+ V A++
Subjt: ---GGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSVDLAEGWAMYKGVQLARQLGFADF
Query: VVETESLRL-------PWDNNKV------------------LFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVL
VV ++ + D ++V ++ R N AH +A LA + + VW E P I +L
Subjt: VVETESLRL-------PWDNNKV------------------LFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1R3J6U3 Ribonuclease H | 1.8e-28 | 32.73 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWG---------------------RGSWLGSVPL---LP-
GLGFRD E FN ALLAKQ W ++QD SL +L+ +YF Q F+EA LG PSFVWRSLL G R W+ P+ LP
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWG---------------------RGSWLGSVPL---LP-
Query: --AACT---VSDLFAASGGWNKGMLKAHFNESDYEAILKIPLQ--HGPTFYVES----GQDSCVVVWPLEAEC--AWTASICSGTVLWLKVCGCAPSLPH
C V LF G W+ +L+ F E D I+ IPL ++ S G + + LE C W + VL KVC +L
Subjt: --AACT---VSDLFAASGGWNKGMLKAHFNESDYEAILKIPLQ--HGPTFYVES----GQDSCVVVWPLEAEC--AWTASICSGTVLWLKVCGCAPSLPH
Query: SVGHSLNSDGRDLWAFANDDLSVFHVGGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSV
+ H + + ++W ++L++ D E +WRPP AG++K+NVDAS + +AG G V R+A+G V + A +
Subjt: SVGHSLNSDGRDLWAFANDDLSVFHVGGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSV
Query: DLAEGWAMYKGVQLARQLGFADFVVETESL
AE +A+ GV LAR G+ + VE++ L
Subjt: DLAEGWAMYKGVQLARQLGFADFVVETESL
|
|
| A0A5E4FZN9 PREDICTED: retrotransposon | 2.1e-32 | 27.7 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
GLGFRD+E FNQALLAKQCW IL+ P SL+ + R +Y P FLEA +G+ PSF+WRSL WG+ WL S
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
Query: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVESG-QDSCV---------------------VVWPLEA-
P LP + V DLF +SG WN +LK F + + +A L+IPL + + V+SG + +C+ +W L+
Subjt: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVESG-QDSCV---------------------VVWPLEA-
Query: --------ECAWTASICSGTVLWLKVCGCAPSLPH------SVGHS------------------------------------LNSDGRDLWAFANDDLSV
CAW C G +L+ + P P+ SV H+ L+S G + FA +
Subjt: --------ECAWTASICSGTVLWLKVCGCAPSLPH------SVGHS------------------------------------LNSDGRDLWAFANDDLSV
Query: FHVGGRRCLAGDSLQA---------------------------RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQ
++ G S A + Q WRPPPAG K+NVD +V+ G G V+R A+GE FMAAC+ +Q
Subjt: FHVGGRRCLAGDSLQA---------------------------RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQ
Query: RCWSVDLAEGWAMYKGVQLARQLGFADFVVE-----------------------TESLRLPWDNNKVL---FSPRQGNRVAHALASLAFSYVDRV-WLEE
+ E A +G++ A +GF V+E E + N + + ++PR GN+VAH LA AF + V W+EE
Subjt: RCWSVDLAEGWAMYKGVQLARQLGFADFVVE-----------------------TESLRLPWDNNKVL---FSPRQGNRVAHALASLAFSYVDRV-WLEE
Query: GPSEISDVL
P + VL
Subjt: GPSEISDVL
|
|
| A0A6J1DAR4 uncharacterized protein LOC111018954 | 1.1e-28 | 25.51 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
G+GFRD+ELFN+ALLAKQCW IL P+S+L VL+G+YF F+EA + PS++WRS+LWGR +W+ S
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
Query: PLLPAACTVSDLF-AASGGWNKGMLKAHFNESDYEAILKIPLQHGP-------------TFYVESGQDSCVVVWPL----------EAECAWTAS-----
P LP VS L GGW +++ F + + IL IP+ G + V SG ++ P E C W
Subjt: PLLPAACTVSDLF-AASGGWNKGMLKAHFNESDYEAILKIPLQHGP-------------TFYVESGQDSCVVVWPL----------EAECAWTAS-----
Query: ------------------------------------------------ICS-GTVLWL--KVCGCAPSLPHSVGHSLNS---------------DGRDLW
IC LW+ K +P L H S + R+
Subjt: ------------------------------------------------ICS-GTVLWL--KVCGCAPSLPHSVGHSLNS---------------DGRDLW
Query: AFANDDLSVFHVGGR------------RCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSVDL
AF + +VF +G R + + R+ + E +W+PP G K+N DAS + AG G ++ G+V AA L+ SVD+
Subjt: AFANDDLSVFHVGGR------------RCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACLGLQRCWSVDL
Query: AEGWAMYKGVQLARQLGF----------ADFVVETESLRLPWDNNKVLFSPRQGNRVAHALASLAFSYVD-RVWLEEGPSEISDVL
AE A +G+QLA ++G + V++ ++ + F R+GN+ AH LA A + +W+E+ P E+ L
Subjt: AEGWAMYKGVQLARQLGF----------ADFVVETESLRLPWDNNKVLFSPRQGNRVAHALASLAFSYVD-RVWLEEGPSEISDVL
|
|
| A0A6J5TGK7 CCHC-type domain-containing protein | 4.0e-31 | 28 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
GLGFRD+E FNQALL KQC CI+Q P SL+ + R +Y P + FLEA +G+ PSF+WRSL WG+ WL S
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
Query: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVES-------------GQDSCVV---------VWPLEAE
P LP + V DLF +SG WN +LK F + + EAIL+IPL + + V+S G+ S V +W L+
Subjt: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVES-------------GQDSCVV---------VWPLEAE
Query: -----CAWTASICSGTVLWLKVCGCA-----PSLPHSVGHSLNSDGRDLWAF---------------ANDDLSVFHVGGRRCLAGD----------SLQA
W C T L VC + L ++V S + + L+A+ A + + + LA + S
Subjt: -----CAWTASICSGTVLWLKVCGCA-----PSLPHSVGHSLNSDGRDLWAF---------------ANDDLSVFHVGGRRCLAGD----------SLQA
Query: RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVETESLRLPWDNNK
+ Q VWRPP G K+NVD +++ G G V+R +G+ FMAAC+ +Q + E A +G++ A +GF D V+E ++
Subjt: RLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEVFMAACL-GLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVETESLRLPWDNNK
Query: VLFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLRTGFEAMRLCS
H++ S + VD + +EE S +++ G + CS
Subjt: VLFSPRQGNRVAHALASLAFSYVDRVWLEEGPSEISDVLRTGFEAMRLCS
|
|
| M5W5F3 Reverse transcriptase domain-containing protein (Fragment) | 4.1e-28 | 26.97 | Show/hide |
Query: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
GLGFRD+E FNQALLAKQCW IL+ P SL+ + R +Y P FLEA +G+ PSF+WRSL WG+ WL S
Subjt: GLGFRDMELFNQALLAKQCWCILQDPSSLLCSVLRGQYFPQSDFLEACLGSRPSFVWRSLLWGR---------------------GSWLG--------SV
Query: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVE-------------SGQDSCVV---------VWPLEA-
P LP + V DLF +SG WN +LK F + + +AIL+IPL + + V+ SG+ S V +W L+
Subjt: PLLPAACTVSDLFAASGGWNKGMLKAHFNESDYEAILKIPL-------------QHGPTFYVE-------------SGQDSCVV---------VWPLEA-
Query: --------ECAWTASICSGTVLWLKVCGCAPSLP------HSVGHS------------------------------------LNSDGRDLWAFA------
CAW C G +L+ + P P SV H+ L+S G + FA
Subjt: --------ECAWTASICSGTVLWLKVCGCAPSLP------HSVGHS------------------------------------LNSDGRDLWAFA------
Query: ------------------------------NDDLSVFH-VGGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEV
+D ++ H + GR+ LQ WRPPPA V+ G G V+R A+GE
Subjt: ------------------------------NDDLSVFH-VGGRRCLAGDSLQARLGDQEECCVWRPPPAGELKLNVDASVRPNIGDAGGGCVLREADGEV
Query: FMAACL-GLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVE-----------------------TESLRLPWDNNKVL---FSPRQGNRVAHALASLAFS
FMAAC+ + + E A +G++ A +GF D ++E E + +N + + ++PR GN+VAH LA AF
Subjt: FMAACL-GLQRCWSVDLAEGWAMYKGVQLARQLGFADFVVE-----------------------TESLRLPWDNNKVL---FSPRQGNRVAHALASLAFS
Query: YVDRV-WLEEGPSEISDVL
+ V W+EE PS + VL
Subjt: YVDRV-WLEEGPSEISDVL
|
|
