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Lag0024950 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0024950
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein yippee-like
Genome locationchr10:7215968..7219958
RNA-Seq ExpressionLag0024950
SyntenyLag0024950
Gene Ontology termsGO:0000151 - ubiquitin ligase complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583979.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

XP_022140248.1 protein yippee-like At5g53940 [Momordica charantia]5.2e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VNVT+GPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

XP_022927222.1 protein yippee-like At5g53940 [Cucurbita moschata]3.0e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

XP_022955197.1 protein yippee-like At5g53940 isoform X1 [Cucurbita moschata]3.9e-1367.86Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        D++  +F  +    F F++ VNVTSGPKEERLMLSGMHTVEDIFCCCCG++LGWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

XP_038893524.1 protein yippee-like At5g53940 [Benincasa hispida]3.0e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

TrEMBL top hitse value%identityAlignment
A0A6J1CHK2 Protein yippee-like2.5e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VNVT+GPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

A0A6J1EGK2 Protein yippee-like1.5e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

A0A6J1GSW9 Protein yippee-like1.9e-1367.86Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        D++  +F  +    F F++ VNVTSGPKEERLMLSGMHTVEDIFCCCCG++LGWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

A0A6J1K1C3 Protein yippee-like1.9e-1367.86Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        D++  +F  +    F F++ VNVTSGPKEERLMLSGMHTVEDIFCCCCG++LGWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

A0A6J1KNK6 Protein yippee-like1.5e-1388.1Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like2.5e-1066.67Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        + FS  VNVTSG  E R+M++GMHTV DIFC CCG I+GWKY
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

Q6NWI4 Protein yippee-like 32.3e-0844.71Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQSAVAPYDAFWADLYPKKIKFFLRELSH
        DLI  SF+ +    + F++ VNV  GP EERL+L+G+H V DI+C  C   LGWKY Q       AF      K+ KF + ELSH
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQSAVAPYDAFWADLYPKKIKFFLRELSH

Q8S5M8 Putative yippee-like protein Os10g03695001.0e-0848.89Show/hide
Query:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQS
        + F   VN++ GP E+R +++G+HTV+DI+C CC QILGW+Y ++
Subjt:  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQS

Q9C777 Protein yippee-like At3g112303.0e-0846.88Show/hide
Query:  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        L+LC    D++  SF+      + FS  VNV +G KE+R+M++GMHTV DI+C  CG  +GWKY
Subjt:  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

Q9FN32 Protein yippee-like At5g539409.1e-1360.71Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        DL+  SF       + F+ +VN++ GP EERLMLSGMHTV DIFCCCCGQ +GWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

Arabidopsis top hitse value%identityAlignment
AT3G08990.1 Yippee family putative zinc-binding protein3.7e-0950Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        D+I  SF       + F   VNVT G KE R+M++G HTV DIFC  CG ++GWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

AT3G08990.2 Yippee family putative zinc-binding protein3.7e-0950Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        D+I  SF       + F   VNVT G KE R+M++G HTV DIFC  CG ++GWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

AT3G11230.1 Yippee family putative zinc-binding protein2.2e-0946.88Show/hide
Query:  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        L+LC    D++  SF+      + FS  VNV +G KE+R+M++GMHTV DI+C  CG  +GWKY
Subjt:  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

AT3G11230.2 Yippee family putative zinc-binding protein2.2e-0946.88Show/hide
Query:  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        L+LC    D++  SF+      + FS  VNV +G KE+R+M++GMHTV DI+C  CG  +GWKY
Subjt:  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY

AT5G53940.1 Yippee family putative zinc-binding protein6.5e-1460.71Show/hide
Query:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
        DL+  SF       + F+ +VN++ GP EERLMLSGMHTV DIFCCCCGQ +GWKY
Subjt:  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTCTTGCCGATGACGTCCTCTCTCGGGTTTGCTCGAAGACAGATTGTTTTCGCTTGTATTAGCGTTATGCTTTCCTTATGTATCGCGGTTGCTGATTTAATCGA
TGTTTCGTTCAAATTTGCGGATTCCAATTTTGCCTTTTCAGCCAATGTGAATGTAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCGGGTATGCACACTGTGGAAG
ATATCTTTTGTTGCTGTTGTGGACAAATTCTGGGATGGAAATATGCTCAATCTGCCGTTGCCCCTTATGATGCCTTTTGGGCTGATCTATACCCAAAGAAAATAAAATTC
TTTTTGCGGGAGCTTTCCCATAGAGGTGTCCTTACAGAAGACAAACTACAGCATCACCTCCCTCCCATGGCTCTATCTCCCTGTTGGTGTGCCCTGTGCAACAACGATAG
CGAGCCACAAAGTCACTTATTCTACCACTGCCCATTCGCTTACAGATCTCTGCCTCAACTTATGCAGCTAAATATGGCCAGGAGATGGCCCACAGGTTCGATGGTCGATA
TTGTCACTGCCTCAATTTTACCTGCCGTGTTGACTAACAAGAATAAAGAGGCAAAAGGGGCCGCATTGAGCCGTCTTGCTTTGCTTGCTTGGCTTCTCGGCATAGCCCGC
CGTACACGACGAGTTGGACTGCGGCCGGCTCCTCATTTAAAACGCTATCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTCTTGCCGATGACGTCCTCTCTCGGGTTTGCTCGAAGACAGATTGTTTTCGCTTGTATTAGCGTTATGCTTTCCTTATGTATCGCGGTTGCTGATTTAATCGA
TGTTTCGTTCAAATTTGCGGATTCCAATTTTGCCTTTTCAGCCAATGTGAATGTAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCGGGTATGCACACTGTGGAAG
ATATCTTTTGTTGCTGTTGTGGACAAATTCTGGGATGGAAATATGCTCAATCTGCCGTTGCCCCTTATGATGCCTTTTGGGCTGATCTATACCCAAAGAAAATAAAATTC
TTTTTGCGGGAGCTTTCCCATAGAGGTGTCCTTACAGAAGACAAACTACAGCATCACCTCCCTCCCATGGCTCTATCTCCCTGTTGGTGTGCCCTGTGCAACAACGATAG
CGAGCCACAAAGTCACTTATTCTACCACTGCCCATTCGCTTACAGATCTCTGCCTCAACTTATGCAGCTAAATATGGCCAGGAGATGGCCCACAGGTTCGATGGTCGATA
TTGTCACTGCCTCAATTTTACCTGCCGTGTTGACTAACAAGAATAAAGAGGCAAAAGGGGCCGCATTGAGCCGTCTTGCTTTGCTTGCTTGGCTTCTCGGCATAGCCCGC
CGTACACGACGAGTTGGACTGCGGCCGGCTCCTCATTTAAAACGCTATCGGTAA
Protein sequenceShow/hide protein sequence
MLLLPMTSSLGFARRQIVFACISVMLSLCIAVADLIDVSFKFADSNFAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQSAVAPYDAFWADLYPKKIKF
FLRELSHRGVLTEDKLQHHLPPMALSPCWCALCNNDSEPQSHLFYHCPFAYRSLPQLMQLNMARRWPTGSMVDIVTASILPAVLTNKNKEAKGAALSRLALLAWLLGIAR
RTRRVGLRPAPHLKRYR