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Lag0025022 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025022
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:7821563..7822157
RNA-Seq ExpressionLag0025022
SyntenyLag0025022
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB30735.1 hypothetical protein B456_005G157700 [Gossypium raimondii]5.8e-0540.28Show/hide
Query:  EKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANA
        ++ +GLG++ R+SNG VL    +F +  +    AEL A++EG+ FA SL L++   E+DC S +N + KA A
Subjt:  EKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANA

KZM81791.1 hypothetical protein DCAR_029404 [Daucus carota subsp. sativus]2.6e-0535.64Show/hide
Query:  GLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK----------ANAIAKNARCDKCSIIWNFVVPEWI
        GLG+V RN  G+ L +  ++L     P   ELLAI EGLK A  +    FILE DC  A+ L+            A+ +A+ A   K S  W+   P ++
Subjt:  GLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK----------ANAIAKNARCDKCSIIWNFVVPEWI

Query:  L
        L
Subjt:  L

PRQ40599.1 putative ribonuclease H-like domain-containing protein [Rosa chinensis]2.0e-0542.86Show/hide
Query:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK
        G    G+G V R++ G  +G+V   L  ++PP TAEL AI  GL+FA   G    ++E DCL  +NLL+K
Subjt:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK

PRQ56623.1 putative ribonuclease H-like domain-containing protein [Rosa chinensis]9.9e-0541.43Show/hide
Query:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK
        G    G G V R++ G  +G+V   L  ++PP TAEL AI  GL+FA   G    ++E DCL  +NLL++
Subjt:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK

XP_010686140.1 PREDICTED: uncharacterized protein LOC104900422 [Beta vulgaris subsp. vulgaris]2.6e-0532.63Show/hide
Query:  SGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANAIAKNARCDKCSIIWNFVVPEWILVLV
        SGLG+VCR++ G++L   A+ +  +   P AE  A+LEG+  A++LGL + I+E DC   +  L K          +K S  +N ++ + + V++
Subjt:  SGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANAIAKNARCDKCSIIWNFVVPEWILVLV

TrEMBL top hitse value%identityAlignment
A0A0D2SHU8 RNase H domain-containing protein2.8e-0540.28Show/hide
Query:  EKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANA
        ++ +GLG++ R+SNG VL    +F +  +    AEL A++EG+ FA SL L++   E+DC S +N + KA A
Subjt:  EKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANA

A0A175YF39 RNase H domain-containing protein1.3e-0535.64Show/hide
Query:  GLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK----------ANAIAKNARCDKCSIIWNFVVPEWI
        GLG+V RN  G+ L +  ++L     P   ELLAI EGLK A  +    FILE DC  A+ L+            A+ +A+ A   K S  W+   P ++
Subjt:  GLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK----------ANAIAKNARCDKCSIIWNFVVPEWI

Query:  L
        L
Subjt:  L

A0A2P6R2K8 Putative ribonuclease H-like domain-containing protein9.6e-0642.86Show/hide
Query:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK
        G    G+G V R++ G  +G+V   L  ++PP TAEL AI  GL+FA   G    ++E DCL  +NLL+K
Subjt:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK

A0A2P6SD65 Putative ribonuclease H-like domain-containing protein4.8e-0541.43Show/hide
Query:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK
        G    G G V R++ G  +G+V   L  ++PP TAEL AI  GL+FA   G    ++E DCL  +NLL++
Subjt:  GEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNK

A0A803PLS0 Uncharacterized protein8.1e-0543.24Show/hide
Query:  EGEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLL-NKAN
        +G   SGLG V R+S G +L + A  L+ +LPP   EL+AI  G++      L RF +E DCL A+ L+ NK N
Subjt:  EGEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLL-NKAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTTCTTTCTTTGGAGTGAGGGTGAGAAGAACTCTGGTTTGGGGCTGGTGTGTCGGAATTCTAATGGTAATGTGTTGGGATCTGTGGCTATTTTCTTGGAATTGGA
CCTTCCTCCTCCCACGGCTGAATTACTGGCAATTCTGGAAGGGTTGAAGTTTGCAGAGAGTCTAGGACTCGACAGATTCATACTTGAACTAGATTGTCTTAGTGCTATTA
ACCTCCTCAACAAAGCAAATGCCATAGCTAAAAATGCTAGATGTGATAAGTGTTCTATTATCTGGAACTTTGTTGTTCCTGAGTGGATTCTTGTATTGGTCCTTCGTGAC
TGGTTTTCAGTTGCCCCTGTGGCGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACTTCTTTCTTTGGAGTGAGGGTGAGAAGAACTCTGGTTTGGGGCTGGTGTGTCGGAATTCTAATGGTAATGTGTTGGGATCTGTGGCTATTTTCTTGGAATTGGA
CCTTCCTCCTCCCACGGCTGAATTACTGGCAATTCTGGAAGGGTTGAAGTTTGCAGAGAGTCTAGGACTCGACAGATTCATACTTGAACTAGATTGTCTTAGTGCTATTA
ACCTCCTCAACAAAGCAAATGCCATAGCTAAAAATGCTAGATGTGATAAGTGTTCTATTATCTGGAACTTTGTTGTTCCTGAGTGGATTCTTGTATTGGTCCTTCGTGAC
TGGTTTTCAGTTGCCCCTGTGGCGCAATAA
Protein sequenceShow/hide protein sequence
MYFFLWSEGEKNSGLGLVCRNSNGNVLGSVAIFLELDLPPPTAELLAILEGLKFAESLGLDRFILELDCLSAINLLNKANAIAKNARCDKCSIIWNFVVPEWILVLVLRD
WFSVAPVAQ