; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025023 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025023
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnuclear pore complex protein NUP1-like
Genome locationchr10:7825083..7828320
RNA-Seq ExpressionLag0025023
SyntenyLag0025023
Gene Ontology termsNA
InterPro domainsIPR000742 - EGF-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587893.1 Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-6392.37Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

KAG7021778.1 Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-6392.37Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

XP_022929707.1 nuclear pore complex protein NUP1-like [Cucurbita moschata]4.6e-6392.37Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

XP_023529547.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo]4.6e-6392.37Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

XP_023529548.1 nuclear pore complex protein NUP1-like isoform X2 [Cucurbita pepo subsp. pepo]4.6e-6392.37Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

TrEMBL top hitse value%identityAlignment
A0A1S3B9A7 nuclear pore complex protein NUP1 isoform X38.7e-6086.57Show/hide
Query:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS
        +KL +VGASPVDIARAYM+NRK EPGLLSDKIPD+ R L+HGDHQMSKPFIPSMSP+PSTCWPGAMSESQ GYLTPRSQR GRFGLH+FPRTPYSRSIFS
Subjt:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS

Query:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        K KSKLTQLQGD QKFV TP+PLWQQSRTPAY+Q
Subjt:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

A0A1S3BA46 nuclear pore complex protein NUP1 isoform X18.7e-6086.57Show/hide
Query:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS
        +KL +VGASPVDIARAYM+NRK EPGLLSDKIPD+ R L+HGDHQMSKPFIPSMSP+PSTCWPGAMSESQ GYLTPRSQR GRFGLH+FPRTPYSRSIFS
Subjt:  KKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQR-GRFGLHNFPRTPYSRSIFS

Query:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        K KSKLTQLQGD QKFV TP+PLWQQSRTPAY+Q
Subjt:  KSKSKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

A0A6J1ENH0 nuclear pore complex protein NUP1-like2.2e-6392.37Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSKPFIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQSRTPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

A0A6J1I4G8 nuclear pore complex protein NUP1-like isoform X11.2e-6190.84Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSK FIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQS TPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

A0A6J1I9W7 nuclear pore complex protein NUP1-like isoform X21.2e-6190.84Show/hide
Query:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK
        LN VGASPVDIARAYMSNRK EPGLLSDKIPDDER LL+GDHQMSK FIP MSPNPSTCWPGAMSESQ  YLTPRSQRGRFG HNFPRTPYSRSIFSKSK
Subjt:  LNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSK

Query:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ
        SKLTQLQGD QKFVNTPSPLWQQS TPAY+Q
Subjt:  SKLTQLQGDVQKFVNTPSPLWQQSRTPAYAQ

SwissProt top hitse value%identityAlignment
O80977 Vacuolar-sorting receptor 35.9e-1356.14Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+     +GPGR  + NNGGCW E R+G + SACVD   VKC+CPPGF+GD  K CE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

P93026 Vacuolar-sorting receptor 17.2e-1154.39Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+    A+G     + NNGGCW+ESR G + SACVD+    CKCP GF+GD VKNCE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

P93484 Vacuolar-sorting receptor 12.0e-1356.14Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+ +   +G GR  + NNGGCW ++RNG + SAC+D+G VKC+CP GF+GD VKNCE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

Q56ZQ3 Vacuolar-sorting receptor 42.0e-1357.89Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+     +GPGR  + NNGGCW E R+G + SACVD   VKC+CPPGF+GD VK CE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

Q8L7E3 Vacuolar-sorting receptor 75.2e-0952.94Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGD
        G+ S    GP R  + NNGGCW ++RNGL+ SAC D+    CKCP GF+GD
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGD

Arabidopsis top hitse value%identityAlignment
AT2G14720.1 vacuolar sorting receptor 41.4e-1457.89Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+     +GPGR  + NNGGCW E R+G + SACVD   VKC+CPPGF+GD VK CE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

AT2G14720.2 vacuolar sorting receptor 41.4e-1457.89Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+     +GPGR  + NNGGCW E R+G + SACVD   VKC+CPPGF+GD VK CE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

AT2G14740.1 vaculolar sorting receptor 34.2e-1456.14Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+     +GPGR  + NNGGCW E R+G + SACVD   VKC+CPPGF+GD  K CE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

AT2G14740.2 vaculolar sorting receptor 34.2e-1456.14Show/hide
Query:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE
        G+     +GPGR  + NNGGCW E R+G + SACVD   VKC+CPPGF+GD  K CE
Subjt:  GFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCE

AT5G20200.1 nucleoporin-related1.0e-2043.51Show/hide
Query:  NEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKS
        +EVG SP ++A+AYM  +          +  +E+  L     + K  + S S  PS CWPG  S  Q G+ TP+S+R  +GL NFPRTPYSR+I S SKS
Subjt:  NEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKS

Query:  KLTQLQGDVQKFV-NTPSPLWQQSRTPAYAQ
        KL QLQ D  K + N  SP   QS    Y Q
Subjt:  KLTQLQGDVQKFV-NTPSPLWQQSRTPAYAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAATTTGGTTAAGAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATGTGAACCAGGCTTGCTTTCTGACAAGAT
ACCAGATGATGAAAGGGCTTTGCTTCATGGTGATCATCAAATGTCAAAGCCTTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAA
GTCAGTGTGGTTATTTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGCTA
ACTCAGTTGCAAGGAGATGTCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGCAGTCACGAACTCCAGCTTATGCTCAGAGTAATCCAATGGTGATTGTTGGCAG
GATAAAGCAACCAACCTCACAACTTGCAAGGATACTTACCGTGGGAGGGTTTGTGAGTGCCCCTGCTACAGGGCCTGGAAGGTACAATGTGAATAATAATGGCGGTTGTT
GGCAAGAAAGTCGTAATGGACTTTCAATGTCTGCTTGTGTGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAATTGTGAAGCT
GAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCAAGTCTCATTTACAA
TCTACTGTTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAATTTGGTTAAGAAACTAAATGAAGTTGGAGCATCACCTGTGGATATTGCAAGAGCATACATGAGCAACCGAAAATGTGAACCAGGCTTGCTTTCTGACAAGAT
ACCAGATGATGAAAGGGCTTTGCTTCATGGTGATCATCAAATGTCAAAGCCTTTTATTCCATCGATGTCCCCCAATCCATCAACTTGTTGGCCTGGTGCCATGTCAGAAA
GTCAGTGTGGTTATTTAACTCCAAGAAGTCAAAGAGGTAGATTTGGTCTTCATAATTTCCCTCGGACTCCATATTCTAGGAGTATCTTTTCAAAGTCCAAGTCCAAGCTA
ACTCAGTTGCAAGGAGATGTCCAAAAGTTTGTGAATACACCATCACCTCTCTGGCAGCAGTCACGAACTCCAGCTTATGCTCAGAGTAATCCAATGGTGATTGTTGGCAG
GATAAAGCAACCAACCTCACAACTTGCAAGGATACTTACCGTGGGAGGGTTTGTGAGTGCCCCTGCTACAGGGCCTGGAAGGTACAATGTGAATAATAATGGCGGTTGTT
GGCAAGAAAGTCGTAATGGACTTTCAATGTCTGCTTGTGTGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAATTGTGAAGCT
GAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCAAGTCTCATTTACAA
TCTACTGTTTGCATAA
Protein sequenceShow/hide protein sequence
MVNLVKKLNEVGASPVDIARAYMSNRKCEPGLLSDKIPDDERALLHGDHQMSKPFIPSMSPNPSTCWPGAMSESQCGYLTPRSQRGRFGLHNFPRTPYSRSIFSKSKSKL
TQLQGDVQKFVNTPSPLWQQSRTPAYAQSNPMVIVGRIKQPTSQLARILTVGGFVSAPATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCEA
EAILEELNPSPVQVLGYGLGLAATLYALLGNASLIYNLLFA