; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025060 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025060
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationchr10:8206208..8207895
RNA-Seq ExpressionLag0025060
SyntenyLag0025060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147401.1 cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus]3.5e-9987.72Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLM
        MVC+SLS A+SL+ PS YKSKLSVPLSLRSS P A+LS N AAKQSSICYNPLRFAVGSEG    I KK+SRGLSAVCYAMP+N RTLQWISTISSVVLM
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLM

Query:  LARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGN
        LA+GTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISL+IAAYLAFQHFSRAG+
Subjt:  LARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGN

Query:  FRRAFDQNSIVATVAVICVTAVSFLLVI
        F+RAFDQNSIVATVAV+C+TAVSFL VI
Subjt:  FRRAFDQNSIVATVAVICVTAVSFLLVI

XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]8.2e-10188.21Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+SLS A+SL+ PS YKSKLSVPLSLRSS P A+LS N AAKQSSICYNPLRFAVGSEGIATA I KK++RGLSA CYAMP+N RTLQW+STISSVVL
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLA+GTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +F+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_022955155.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita moschata]2.3e-9586.46Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+ LS AISLHSP LYKSKLS PLSLRSS P A+L+FN AAKQS IC NP+RF  GS+  +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+L
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLARGTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +FRRAFDQNSIVATVA+ICVTAVS LLVI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]3.6e-9686.9Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+ LS AISLHSP L+KSKLS PLSLRSS P A+L+FN AAKQSSIC NP+RF  GS+  +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+L
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLARGTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +FRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]2.2e-10189.08Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+SLS A+SL++PSLY+SKLSVPLSLRSS P A+LSF+ AAKQSSICYNPLRFAVGSEGIAT AI KKRSRGLSA+CYAMP+NARTLQWISTISS VL
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLA+GTGIQKSFI PLFAL APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +FRRAFDQNSIVATVAVIC TAVSFLLVI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

TrEMBL top hitse value%identityAlignment
A0A0A0LXM7 Uncharacterized protein1.7e-9987.72Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLM
        MVC+SLS A+SL+ PS YKSKLSVPLSLRSS P A+LS N AAKQSSICYNPLRFAVGSEG    I KK+SRGLSAVCYAMP+N RTLQWISTISSVVLM
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLM

Query:  LARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGN
        LA+GTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISL+IAAYLAFQHFSRAG+
Subjt:  LARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGN

Query:  FRRAFDQNSIVATVAVICVTAVSFLLVI
        F+RAFDQNSIVATVAV+C+TAVSFL VI
Subjt:  FRRAFDQNSIVATVAVICVTAVSFLLVI

A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like4.0e-10188.21Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+SLS A+SL+ PS YKSKLSVPLSLRSS P A+LS N AAKQSSICYNPLRFAVGSEGIATA I KK++RGLSA CYAMP+N RTLQW+STISSVVL
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLA+GTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +F+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 24.0e-10188.21Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+SLS A+SL+ PS YKSKLSVPLSLRSS P A+LS N AAKQSSICYNPLRFAVGSEGIATA I KK++RGLSA CYAMP+N RTLQW+STISSVVL
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA-IRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLA+GTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +F+RAFDQNSIVATVAVIC+TAVSFL VI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like1.1e-9585.15Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+SLS A SLH+ SLYK+KLS PLSLRS    A+LS N A K+SSICYNPLRFAVG+EGIAT AI K+RSRGL+ VCYAMPL AR +QWISTIS VVL
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLARGTGIQKSFI PLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISL+IAA+LAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +FRRAFDQNSIVAT AV+CVTA SFLLVI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X21.7e-9686.9Show/hide
Query:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL
        MVC+ LS AISLHSP L+KSKLS PLSLRSS P A+L+FN AAKQSSIC NP+RF  GS+  +T AI KKR RGLSAVCYAMPL+AR LQWISTISSV+L
Subjt:  MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIAT-AIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVL

Query:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG
        MLARGTGIQKSFI PLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG+IISL+IAAYLAFQHFSRAG
Subjt:  MLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAG

Query:  NFRRAFDQNSIVATVAVICVTAVSFLLVI
        +FRRAFDQNSIVATVA+ICVTAVSFLLVI
Subjt:  NFRRAFDQNSIVATVAVICVTAVSFLLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic1.5e-6057.58Show/hide
Query:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA---IRKKRSRGLSAVCYAMP-LNARTLQWISTISSV
        +C+S S  +SLH     K  L++ L  R S+        L    S +C+NPLR +   +  AT      K+R RG S VCYA P L+   LQWISTIS V
Subjt:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA---IRKKRSRGLSAVCYAMP-LNARTLQWISTISSV

Query:  VLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSR
         LM ARGTGI KSF+ PLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSR
Subjt:  VLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSR

Query:  AGNFRRAFDQNSIVATVAVICVTAVSFLLVI
        AG  ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  AGNFRRAFDQNSIVATVAVICVTAVSFLLVI

O23164 Cold-regulated 413 plasma membrane protein 42.6e-1232.14Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        LQW ++I ++ L++   T     +  + + P      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLVIAAYLAFQHFSRAGNFRRAFDQ-NSIVATVAVICV
        +I LVIA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  IISLVIAAYLAFQHFSRAGNFRRAFDQ-NSIVATVAVICV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic5.1e-6154.78Show/hide
Query:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSE---GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVV
        +C+S S  +SLH    +       LSL+  S  + LS  L    S +C+NPLR +   +    ++T + K+R RG S VCYA P++A +LQWISTIS + 
Subjt:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSE---GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVV

Query:  LMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRA
        LMLARGTGI KS + PLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSRA
Subjt:  LMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRA

Query:  GNFRRAFDQNSIVATVAVICVTAVSFLLVI
        G+  +A+++ S++ATVA+I VT VS LL++
Subjt:  GNFRRAFDQNSIVATVAVICVTAVSFLLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 29.7e-1232.28Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS
        L+++++ +++ L++   T     +  S + P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS

Query:  IISLVIAAYLAFQHFSRAGNFRRAFDQ
        +ISL I  YL  +H   +G FR +F Q
Subjt:  IISLVIAAYLAFQHFSRAGNFRRAFDQ

Q9XIM7 Cold-regulated 413 plasma membrane protein 11.4e-1028.65Show/hide
Query:  YNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLAR----GTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRL
        +  L+  +GS+     I  K     +     +      L+W+++I+++ L++       T +  S + P      P+ +    +GE G W AF+A++V+L
Subjt:  YNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLAR----GTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRL

Query:  FF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLVIAAYLAFQHFSRAGNFRRAFDQ-NSIVATVAVICV
        FF       LE+P   +LL +VAP  +    R +  G  I L I  YL  +H   +G FR AF + N I  TV +IC+
Subjt:  FF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLVIAAYLAFQHFSRAGNFRRAFDQ-NSIVATVAVICV

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 21.1e-6157.58Show/hide
Query:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA---IRKKRSRGLSAVCYAMP-LNARTLQWISTISSV
        +C+S S  +SLH     K  L++ L  R S+        L    S +C+NPLR +   +  AT      K+R RG S VCYA P L+   LQWISTIS V
Subjt:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATA---IRKKRSRGLSAVCYAMP-LNARTLQWISTISSV

Query:  VLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSR
         LM ARGTGI KSF+ PLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSR
Subjt:  VLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSR

Query:  AGNFRRAFDQNSIVATVAVICVTAVSFLLVI
        AG  ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  AGNFRRAFDQNSIVATVAVICVTAVSFLLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 27.0e-5867.26Show/hide
Query:  IATAIRKKRSRGLSAVCYAMP-LNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISL
        ++    K+R RG S VCYA P L+   LQWISTIS V LM ARGTGI KSF+ PLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+L
Subjt:  IATAIRKKRSRGLSAVCYAMP-LNARTLQWISTISSVVLMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISL

Query:  LLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGNFRRAFDQNSIVATVAVICVTAVSFLLVI
        LLVIVAPYQV ++RG QEG+I+SL I+ +LAFQHFSRAG  ++AFDQNS++ATVA+I VT VSFL +I
Subjt:  LLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGNFRRAFDQNSIVATVAVICVTAVSFLLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 13.6e-6254.78Show/hide
Query:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSE---GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVV
        +C+S S  +SLH    +       LSL+  S  + LS  L    S +C+NPLR +   +    ++T + K+R RG S VCYA P++A +LQWISTIS + 
Subjt:  VCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSE---GIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVV

Query:  LMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRA
        LMLARGTGI KS + PLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG+II++ I+ +LAFQHFSRA
Subjt:  LMLARGTGIQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRA

Query:  GNFRRAFDQNSIVATVAVICVTAVSFLLVI
        G+  +A+++ S++ATVA+I VT VS LL++
Subjt:  GNFRRAFDQNSIVATVAVICVTAVSFLLVI

AT3G50830.1 cold-regulated 413-plasma membrane 26.9e-1332.28Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS
        L+++++ +++ L++   T     +  S + P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGS

Query:  IISLVIAAYLAFQHFSRAGNFRRAFDQ
        +ISL I  YL  +H   +G FR +F Q
Subjt:  IISLVIAAYLAFQHFSRAGNFRRAFDQ

AT4G37220.1 Cold acclimation protein WCOR413 family1.8e-1332.14Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS
        LQW ++I ++ L++   T     +  + + P      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGS

Query:  IISLVIAAYLAFQHFSRAGNFRRAFDQ-NSIVATVAVICV
        +I LVIA YL  +H   +G F+ +F Q N I  T+ ++ +
Subjt:  IISLVIAAYLAFQHFSRAGNFRRAFDQ-NSIVATVAVICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTATATCTCTGTCGCCTGCTATTTCTCTTCACAGTCCATCTCTCTACAAGTCCAAGCTCTCCGTCCCTCTCTCTCTAAGATCTTCATCGCCGATTGCAAGGCT
CTCGTTCAATCTTGCCGCTAAACAGAGTTCCATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGATTCGCAAGAAGAGGAGCCGTGGTT
TGAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCA
TTTATTGCTCCACTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGCGCATTTTTGGCACTTCTTGTTCGACTGTTCTT
CTTTATCCCTGGTGAACTGGAAATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGAGGAACTCAAGAAGGGAGCATCATCTCAC
TAGTGATTGCCGCATATTTGGCTTTCCAACATTTCTCTCGAGCTGGCAATTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTTATTTGTGTTACT
GCTGTCTCATTCCTGCTTGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGTATATCTCTGTCGCCTGCTATTTCTCTTCACAGTCCATCTCTCTACAAGTCCAAGCTCTCCGTCCCTCTCTCTCTAAGATCTTCATCGCCGATTGCAAGGCT
CTCGTTCAATCTTGCCGCTAAACAGAGTTCCATCTGTTACAATCCGCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGATTCGCAAGAAGAGGAGCCGTGGTT
TGAGTGCTGTTTGTTACGCTATGCCTCTTAACGCTCGCACTCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCA
TTTATTGCTCCACTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGCGCATTTTTGGCACTTCTTGTTCGACTGTTCTT
CTTTATCCCTGGTGAACTGGAAATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGAGGAACTCAAGAAGGGAGCATCATCTCAC
TAGTGATTGCCGCATATTTGGCTTTCCAACATTTCTCTCGAGCTGGCAATTTTCGGAGAGCTTTTGACCAGAATTCAATTGTTGCAACAGTAGCAGTTATTTGTGTTACT
GCTGTCTCATTCCTGCTTGTGATCTGA
Protein sequenceShow/hide protein sequence
MVCISLSPAISLHSPSLYKSKLSVPLSLRSSSPIARLSFNLAAKQSSICYNPLRFAVGSEGIATAIRKKRSRGLSAVCYAMPLNARTLQWISTISSVVLMLARGTGIQKS
FIAPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLVIAAYLAFQHFSRAGNFRRAFDQNSIVATVAVICVT
AVSFLLVI