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Lag0025071 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025071
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:8295511..8295930
RNA-Seq ExpressionLag0025071
SyntenyLag0025071
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057384.1 hypothetical protein E6C27_scaffold280G002530 [Cucumis melo var. makuwa]2.4e-1041.94Show/hide
Query:  SAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        S+WW++  QG+  G+ F+ KLR L+  L+ WN E+FGDI++K ++I+ RI+ ID  E       +LK ER  LK    E+I+ E IS + +AK
Subjt:  SAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

PON49927.1 hypothetical protein TorRG33x02_315920, partial [Trema orientale]3.5e-0938.46Show/hide
Query:  WWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        WWN  T    EG++F+ KLR ++  LK+WN ++FGD+++ KQ ++ RI  +D +E   + +  LK ER+S+K +L E++ KE  S  + +K
Subjt:  WWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

TYK03178.1 hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa]6.3e-1148.81Show/hide
Query:  GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        G+ +G+RF+ KLR L + L+ WN+++FGDI+IKK++++ RI  ID LE    L  ALK+ER+S K  L E+IRKE +S S ++K
Subjt:  GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

XP_010253034.1 PREDICTED: uncharacterized protein LOC104594458 [Nelumbo nucifera]2.5e-0739.42Show/hide
Query:  KEVWRVVNDLALINLVSAWWNVDTQ-GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRK
        +++W  V   + +  V  WW  DT   + EG RF RKL+NL+  LKEWN   FG I+ +K  ++ RI+ ID  EE  Q+    K ER +LK +L   + +
Subjt:  KEVWRVVNDLALINLVSAWWNVDTQ-GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRK

Query:  ETIS
        E IS
Subjt:  ETIS

XP_028121753.1 uncharacterized protein LOC114318966 [Camellia sinensis]4.2e-0741.76Show/hide
Query:  WWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        WW        EGF+F+RKLR ++  LK W +E+FGDI   K  ++  I+ +D  E  + LS AL+D R  LK KL EI+ +E I     AK
Subjt:  WWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

TrEMBL top hitse value%identityAlignment
A0A0A0LEI5 CorC_HlyC domain-containing protein4.9e-0954.55Show/hide
Query:  INLVSAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIK
        +NL + WWN   QG  EGFRF+ KLRNL+  L+ WNKE+ GDI+I+K++I ++IK
Subjt:  INLVSAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIK

A0A1U7ZGY2 uncharacterized protein LOC1045944581.2e-0739.42Show/hide
Query:  KEVWRVVNDLALINLVSAWWNVDTQ-GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRK
        +++W  V   + +  V  WW  DT   + EG RF RKL+NL+  LKEWN   FG I+ +K  ++ RI+ ID  EE  Q+    K ER +LK +L   + +
Subjt:  KEVWRVVNDLALINLVSAWWNVDTQ-GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRK

Query:  ETIS
        E IS
Subjt:  ETIS

A0A2P5BMA4 Uncharacterized protein (Fragment)1.7e-0938.46Show/hide
Query:  WWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        WWN  T    EG++F+ KLR ++  LK+WN ++FGD+++ KQ ++ RI  +D +E   + +  LK ER+S+K +L E++ KE  S  + +K
Subjt:  WWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

A0A5A7UQK0 Uncharacterized protein1.2e-1041.94Show/hide
Query:  SAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        S+WW++  QG+  G+ F+ KLR L+  L+ WN E+FGDI++K ++I+ RI+ ID  E       +LK ER  LK    E+I+ E IS + +AK
Subjt:  SAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

A0A5D3BW32 Uncharacterized protein3.1e-1148.81Show/hide
Query:  GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK
        G+ +G+RF+ KLR L + L+ WN+++FGDI+IKK++++ RI  ID LE    L  ALK+ER+S K  L E+IRKE +S S ++K
Subjt:  GKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPALKDERLSLKAKLVEIIRKETISSSLEAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCACAATCTGCCTCCAACAACGGGAACCCATTGATTCTGTTTGCAGTTTTCAGCTTGAAGAGGAATTCACTAAGAAAAAGAAAGAAGTTTGGAGGGTTGTTAA
TGATCTTGCTTTAATAAATCTCGTCTCAGCTTGGTGGAATGTTGATACCCAAGGCAAATTGGAAGGATTTCGCTTCGTGAGAAAGCTTAGAAACCTTAGGAGCATCCTGA
AGGAGTGGAACAAAGAGATCTTTGGAGATATTAAGATTAAGAAACAAAAGATCATGGATAGAATCAAATCCATTGATGACCTCGAAGAGGTGGACCAGTTATCCCCTGCC
TTGAAAGATGAGCGTCTATCTCTCAAAGCTAAGCTTGTAGAGATAATTCGCAAGGAGACCATTAGCTCGAGCCTGGAGGCAAAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCACAATCTGCCTCCAACAACGGGAACCCATTGATTCTGTTTGCAGTTTTCAGCTTGAAGAGGAATTCACTAAGAAAAAGAAAGAAGTTTGGAGGGTTGTTAA
TGATCTTGCTTTAATAAATCTCGTCTCAGCTTGGTGGAATGTTGATACCCAAGGCAAATTGGAAGGATTTCGCTTCGTGAGAAAGCTTAGAAACCTTAGGAGCATCCTGA
AGGAGTGGAACAAAGAGATCTTTGGAGATATTAAGATTAAGAAACAAAAGATCATGGATAGAATCAAATCCATTGATGACCTCGAAGAGGTGGACCAGTTATCCCCTGCC
TTGAAAGATGAGCGTCTATCTCTCAAAGCTAAGCTTGTAGAGATAATTCGCAAGGAGACCATTAGCTCGAGCCTGGAGGCAAAAAGCTAA
Protein sequenceShow/hide protein sequence
MASTICLQQREPIDSVCSFQLEEEFTKKKKEVWRVVNDLALINLVSAWWNVDTQGKLEGFRFVRKLRNLRSILKEWNKEIFGDIKIKKQKIMDRIKSIDDLEEVDQLSPA
LKDERLSLKAKLVEIIRKETISSSLEAKS