; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0025100 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025100
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr10:8578792..8580271
RNA-Seq ExpressionLag0025100
SyntenyLag0025100
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]1.7e-2031.16Show/hide
Query:  SWWVWSRRNKDLFGEAVRGDEGEYGW--QWVVDYLAHFRAFHRREGVAI--VKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKL
        +W +W++RN  +     RG   +  W  +   +YL+ F+    +  + +  +    W  P  P YKLN D A+ +E N S IGAI+RN +GE M  +   
Subjt:  SWWVWSRRNKDLFGEAVRGDEGEYGW--QWVVDYLAHFRAFHRREGVAI--VKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKL

Query:  VEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWL
           V D +  E +  R+ +   +DAGFS++++E D+A V++ +   G D S +G ++++++ ++  LR  SF    R  N +AH +AR A  +  +  WL
Subjt:  VEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWL

Query:  EEVPLVVEGCYSVEL
        EE P  V    S +L
Subjt:  EEVPLVVEGCYSVEL

XP_023904177.1 uncharacterized protein LOC112015942 [Quercus suber]1.2e-2133.33Show/hide
Query:  SWWVWSRRNKDLFGEAVRGDEGEYGW--QWVVDYLAHFRAFHRREGV---AIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMK
        +W +WS+RN  L G    G   E GW  +  V++L  F     +  V       G  W PP  P +K+N D A+  +S  S  GA++RNE GE M  L  
Subjt:  SWWVWSRRNKDLFGEAVRGDEGEYGW--QWVVDYLAHFRAFHRREGV---AIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMK

Query:  LVEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW
        +   V   D  E +  R+ +   VDAGF+++++E DS  V+  + S   D S +G ++ +I+ +   LR  SF W  R  N++AH +A+ A  L+ +  W
Subjt:  LVEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW

Query:  LEEVPLV
        +E+ P V
Subjt:  LEEVPLV

XP_023915286.1 uncharacterized protein LOC112026812 [Quercus suber]7.6e-2132.84Show/hide
Query:  WWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHF--RAFHRREGVAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVEF
        W +W RRN+ +FG  ++      G    +  LA F     H     ++   + W PP    YKLN DVAV  + + S +G I+RN  G+ M  L      
Subjt:  WWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHF--RAFHRREGVAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVEF

Query:  VLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEEV
        V D D  E +  R GL   ++AGF  ++VE D+  V+  + S   D S +G +++++R ++G LRL  F+   R+ N +AH +AR A  +  +  WLE+ 
Subjt:  VLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEEV

Query:  P
        P
Subjt:  P

XP_023928118.1 uncharacterized protein LOC112039474 [Quercus suber]1.1e-1930.52Show/hide
Query:  SWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREG-----VAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMK
        SW +W++RN  +FG  ++  + ++  +W  ++L     FH+ +G     V+ +    W PP    +KLN D  V  + + S +GA++RNE GE M T++ 
Subjt:  SWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREG-----VAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMK

Query:  LVEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW
         V  V+D  V E +  R  +     AGF+ ++VE D+  V+  + +   D S +G +I++I+ ++ + R  SF +  RA N +A+ +AR A  +  +  W
Subjt:  LVEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW

Query:  LEE-VPLVVEGCY
        +E+  P V+E  Y
Subjt:  LEE-VPLVVEGCY

XP_030941688.1 uncharacterized protein LOC115966628 [Quercus lobata]7.1e-1932.84Show/hide
Query:  TPSWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIVKGE--GWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKL
        T SW +W++RN  + G  ++ D G+   +  V YL  +R    +  +   +     W PP    YKLN D A+  E   S  GAIVRNERGE M  L   
Subjt:  TPSWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIVKGE--GWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKL

Query:  VEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWL
           V + +  EA+  R  +   + AGF+++++E D+  V+  + S   D+S +G + ++I+ +   LR  S     R  N +AH +AR A  +  E  WL
Subjt:  VEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWL

Query:  EEVP
        EE P
Subjt:  EEVP

TrEMBL top hitse value%identityAlignment
A0A2N9FY90 RNase H domain-containing protein9.3e-1730.24Show/hide
Query:  SWWVWSRRNK---DLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIV--KGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMK
        +W +W+ RNK    L G  + G       Q   D +  F     R    ++      W+PP     K+N D AV  E+N   IG I+RNE G  M+ L +
Subjt:  SWWVWSRRNK---DLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIV--KGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMK

Query:  LVEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW
         + +     V+EA+ +R  L   ++ GF  V++E DS  VV +    G   S  G +I +++ ++  + +C F    R  N++AH +AR A  +    TW
Subjt:  LVEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW

Query:  LEEVP
        +E VP
Subjt:  LEEVP

A0A2N9IQU0 Uncharacterized protein2.5e-1730.69Show/hide
Query:  SWWVWSRRNKDLFGEAVRGDE--GEYGWQWVVDYLAHFRAFHRREGVAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVE
        SW +W RRNK    +AV   +        ++  +++ F      E    V  + W P  +  +K+N D AV +E+N + IG IVRN+ GE M TL++ V 
Subjt:  SWWVWSRRNKDLFGEAVRGDE--GEYGWQWVVDYLAHFRAFHRREGVAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVE

Query:  FVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEE
        +   V+ +EA   +  +  V + G S+   E DS  VV+ + S     S+ G +IE+ + ++ AL    F       N +AH +AR A+ +     W+E+
Subjt:  FVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEE

Query:  VP
        VP
Subjt:  VP

A0A6J1CIF1 uncharacterized protein LOC1110112374.2e-1731.55Show/hide
Query:  QWVVDYLAHFRAFHRREGVAIVKGEG---WSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVEFVLDVDVLEAMVVREGLAAVVDAGF
        +W   Y+  FR  +       V       W PP+   YK+NTD +       + +G I+RN+RG+ M +  K +E +  VD+ EA+V  EGL      G 
Subjt:  QWVVDYLAHFRAFHRREGVAIVKGEG---WSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVEFVLDVDVLEAMVVREGLAAVVDAGF

Query:  SQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEEVPLVVEGCYSVE
        + V++ETDS+R+ +       D SE G ++ + +         SF +  R  NK AH +AR AL L+    W+E+ PL ++ C  +E
Subjt:  SQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEEVPLVVEGCYSVE

A0A6J1DBJ7 uncharacterized protein LOC1110189733.5e-1630.28Show/hide
Query:  WWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIV-----KGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKL
        W +W+ RN+     ++ G   +    W  +YL  ++A  R    A+V     +   W PP  P  K+N D A  +ES ++ +G I+R+  G   LT ++L
Subjt:  WWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIV-----KGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKL

Query:  VEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIR-GISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW
        +    DVD +E   V EG+   V+AGF +  +ETDS R+ + + +   D SE+G +   I+  +S      SF +  R  N  AH +A+ AL       W
Subjt:  VEFVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIR-GISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTW

Query:  LEEVPLVVEGCYSVELRT
        +EE P  +    +V+ R+
Subjt:  LEEVPLVVEGCYSVELRT

A0A7N2RFA1 Uncharacterized protein1.9e-1730.2Show/hide
Query:  SWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIVKG--EGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVE
        +W +WS+RN+   G  ++        +   D L  FR    +  +A        W PP    +KLN D A+  +   S IGAI+RNERGE M  +    +
Subjt:  SWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIVKG--EGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVE

Query:  FVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEE
         VLD    E +  R  L   +D GFS++++E DSA+V++ + S   + S +G + ++I+ +   L     +   R  N   H +AR A  +  +  WLE+
Subjt:  FVLDVDVLEAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEE

Query:  VP
         P
Subjt:  VP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCCCTAGCTGGTGGGTGTGGAGCAGGAGGAATAAGGATTTGTTTGGGGAGGCTGTTCGGGGCGATGAGGGGGAGTATGGTTGGCAATGGGTGGTTGATTATCT
AGCCCATTTTAGGGCTTTTCATCGTAGAGAGGGTGTGGCTATTGTGAAGGGGGAGGGGTGGAGCCCACCTGAGTTCCCTAATTACAAGCTAAATACAGATGTAGCAGTGC
ATGAAGAGAGCAATCTCAGCAGTATTGGGGCAATTGTTAGGAATGAGAGAGGGGAAGGGATGCTAACCTTGATGAAGCTGGTTGAGTTTGTGCTTGACGTGGATGTTCTG
GAGGCGATGGTTGTGCGCGAAGGGCTGGCGGCTGTCGTGGATGCCGGTTTCTCGCAGGTGTTGGTGGAAACGGATTCGGCAAGGGTAGTTAGTCAGATTGAGTCTGTAGG
GGGTGACCGATCGGAGATGGGGTTTATGATTGAGGAGATTCGGGGCATTTCTGGTGCCCTGAGGTTGTGCTCGTTCCGGTGGTGTTGTCGGGCGAGGAACAAGATGGCGC
ATGAGGTGGCAAGAGCAGCGTTGAGGTTGCAGATGGAAGGTACTTGGTTGGAGGAGGTGCCTCTGGTGGTCGAGGGCTGCTACTCTGTTGAGCTGAGGACTTCTGTGTTG
GACTCTAGGGCTTGCTGGTTAGAGAAGAAGACGATGGTGAAGATGGAAGTTGAGGTTGAGGAAGAAGATGAAGATGGTGAAGATTTAATGAAAATGGAGGAAGAAGATGA
TGAAGATAAAGATGAAAATGGAGGAAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACACCCCTAGCTGGTGGGTGTGGAGCAGGAGGAATAAGGATTTGTTTGGGGAGGCTGTTCGGGGCGATGAGGGGGAGTATGGTTGGCAATGGGTGGTTGATTATCT
AGCCCATTTTAGGGCTTTTCATCGTAGAGAGGGTGTGGCTATTGTGAAGGGGGAGGGGTGGAGCCCACCTGAGTTCCCTAATTACAAGCTAAATACAGATGTAGCAGTGC
ATGAAGAGAGCAATCTCAGCAGTATTGGGGCAATTGTTAGGAATGAGAGAGGGGAAGGGATGCTAACCTTGATGAAGCTGGTTGAGTTTGTGCTTGACGTGGATGTTCTG
GAGGCGATGGTTGTGCGCGAAGGGCTGGCGGCTGTCGTGGATGCCGGTTTCTCGCAGGTGTTGGTGGAAACGGATTCGGCAAGGGTAGTTAGTCAGATTGAGTCTGTAGG
GGGTGACCGATCGGAGATGGGGTTTATGATTGAGGAGATTCGGGGCATTTCTGGTGCCCTGAGGTTGTGCTCGTTCCGGTGGTGTTGTCGGGCGAGGAACAAGATGGCGC
ATGAGGTGGCAAGAGCAGCGTTGAGGTTGCAGATGGAAGGTACTTGGTTGGAGGAGGTGCCTCTGGTGGTCGAGGGCTGCTACTCTGTTGAGCTGAGGACTTCTGTGTTG
GACTCTAGGGCTTGCTGGTTAGAGAAGAAGACGATGGTGAAGATGGAAGTTGAGGTTGAGGAAGAAGATGAAGATGGTGAAGATTTAATGAAAATGGAGGAAGAAGATGA
TGAAGATAAAGATGAAAATGGAGGAAAAAGATGA
Protein sequenceShow/hide protein sequence
MNTPSWWVWSRRNKDLFGEAVRGDEGEYGWQWVVDYLAHFRAFHRREGVAIVKGEGWSPPEFPNYKLNTDVAVHEESNLSSIGAIVRNERGEGMLTLMKLVEFVLDVDVL
EAMVVREGLAAVVDAGFSQVLVETDSARVVSQIESVGGDRSEMGFMIEEIRGISGALRLCSFRWCCRARNKMAHEVARAALRLQMEGTWLEEVPLVVEGCYSVELRTSVL
DSRACWLEKKTMVKMEVEVEEEDEDGEDLMKMEEEDDEDKDENGGKR