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Lag0025105 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0025105
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:8583734..8584347
RNA-Seq ExpressionLag0025105
SyntenyLag0025105
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia]7.8e-2546.88Show/hide
Query:  LCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC-WRFTGFYGDPEVRRRKCSWD
        L  L+  E+P L+FL E+K+K+      K +L       VDCVG+ GGL L WK  L V ++S+S  H+DA+I+  +G  WRFTG YG+PEV  R  +W+
Subjt:  LCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC-WRFTGFYGDPEVRRRKCSWD

Query:  LMRRLNDLPTMPWVLGGDFNELVSSGEK
        L+RRLN     PW++GGDFNEL+   EK
Subjt:  LMRRLNDLPTMPWVLGGDFNELVSSGEK

PON98092.1 Endonuclease/exonuclease/phosphatase, partial [Trema orientale]2.0e-2546.09Show/hide
Query:  LCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC-WRFTGFYGDPEVRRRKCSWD
        L +++ + +P L+FLSE+K+  ++A   K  +       VD VG  GGL L W++G DV +RSYS+ ++D++I S+ G  WRF GFYG P    RK SWD
Subjt:  LCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC-WRFTGFYGDPEVRRRKCSWD

Query:  LMRRLNDLPTMPWVLGGDFNELVSSGEK
        L R+L+ L  +PWV GGDFNE++S  EK
Subjt:  LMRRLNDLPTMPWVLGGDFNELVSSGEK

XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]6.0e-2545.31Show/hide
Query:  QLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC--WRFTGFYGDPEVRRRKCSWDL
        ++V  E+P L+FL E+K+  ++    KE LK    + V  + + GGL L WK+ L V ++SYS+ H+DA++   +G   WRFTGFYG+P+  RR+ SW L
Subjt:  QLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC--WRFTGFYGDPEVRRRKCSWDL

Query:  MRRLNDLPTMPWVLGGDFNELVSSGEKE
        ++RL+   ++PWV  GDFNEL+ SGEKE
Subjt:  MRRLNDLPTMPWVLGGDFNELVSSGEKE

XP_023903659.1 uncharacterized protein LOC112015491 [Quercus suber]6.0e-2545.31Show/hide
Query:  QLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC--WRFTGFYGDPEVRRRKCSWDL
        ++V  E+P L+FL E+K+  ++    KE LK    + V  + + GGL L WK+ L V ++SYS+ H+DA++   +G   WRFTGFYG+P+  RR+ SW L
Subjt:  QLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC--WRFTGFYGDPEVRRRKCSWDL

Query:  MRRLNDLPTMPWVLGGDFNELVSSGEKE
        ++RL+   ++PWV  GDFNEL+ SGEKE
Subjt:  MRRLNDLPTMPWVLGGDFNELVSSGEKE

XP_031108378.1 uncharacterized protein LOC116012842 [Ipomoea triloba]2.7e-2554.37Show/hide
Query:  IYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC--WRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSS
        I K KL FEG++ VD +G  GGL L WK GLD+ + SYS  H+DA I+  +    WRFTGFYG PE  RR+CSWDL+R L+   T+PW+  GDFN+L+ S
Subjt:  IYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC--WRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSS

Query:  GEK
         EK
Subjt:  GEK

TrEMBL top hitse value%identityAlignment
A0A2N9FNQ8 Uncharacterized protein5.8e-2640.74Show/hide
Query:  GNWVEEPVGKRLKEAFVGGERVVSANPDVQDRNHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSK
        G+W  E VGKR     V G  +   NP      H   +V  + P++LFL E+K+ S +    + KL ++ V +V  +G+ GGL L WK   ++I+++YS+
Subjt:  GNWVEEPVGKRLKEAFVGGERVVSANPDVQDRNHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSK

Query:  FHVDAMIKSKE-GCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEK
         H+DA + S++  CWR TGFYG PE  RRK SW L++ L+ L + PW+  GDFNEL++  EK
Subjt:  FHVDAMIKSKE-GCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEK

A0A2N9HCL8 Reverse transcriptase domain-containing protein9.9e-2638.82Show/hide
Query:  GGERVVSANPDVQDR-------NHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKS-
        G E  ++  P V +          L  +V  + P++LFL E+K+  ++  + + KL F+ V +V  +G+ GGL L WK   +V+++++S+ H+DA + S 
Subjt:  GGERVVSANPDVQDR-------NHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKS-

Query:  KEGCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEK
        +E CWR TGFYG PE  RRK SW L++ L+ + + PW+  GDFNEL++S EK
Subjt:  KEGCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEK

A0A2N9HGQ0 CCHC-type domain-containing protein9.9e-2645.99Show/hide
Query:  NPDVQDRNHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC-WRFTGFYGDPE
        N  VQ+ + L +L   E P+++F  E++++       + KL   G + VDCVG GG L L W   + V +RSYS  H+DA I S EG  WRFT FYG+PE
Subjt:  NPDVQDRNHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGC-WRFTGFYGDPE

Query:  VRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEK
          RR  SWDL+RRL    ++PW++ GDFNE+V +GEK
Subjt:  VRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEK

A0A2N9I611 Uncharacterized protein1.4e-2747.46Show/hide
Query:  PRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPT
        P++LFLSE+K+   +    +  LK++    V   G+ GGL L W E +D+ + SY++FH+DA IKS+EG WRFTGFYG PE  +RK SW L++ L ++  
Subjt:  PRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEGCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPT

Query:  MPWVLGGDFNELVSSGEK
        +PWV  GDFNE++S  EK
Subjt:  MPWVLGGDFNELVSSGEK

A0A803PMD0 Uncharacterized protein4.4e-2647.29Show/hide
Query:  LCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEG-CWRFTGFYGDPEVRRRKCSWD
        LC  V + +P ++FLSE+++        +  L FEG   V   GK GGL L WKE  +V ++S++  H+DAM+++  G CWRFTGFYG P+   RK SW 
Subjt:  LCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWKEGLDVILRSYSKFHVDAMIKSKEG-CWRFTGFYGDPEVRRRKCSWD

Query:  LMRRLNDLPTMPWVLGGDFNELVSSGEKE
        LM RL DL    WV GGDFNE+V S EK+
Subjt:  LMRRLNDLPTMPWVLGGDFNELVSSGEKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGAGGGGAGATAGCAGATTGGGGAAGAGGGCGCTGTTAGGCGATGGGGCTGATGGGGTTGGGAATTGGGTTGAAGAACCAGTTGGGAAGAGATTGAAGGAAGC
GTTTGTAGGAGGAGAGAGAGTTGTATCGGCGAACCCTGATGTTCAGGATCGCAATCATTTGTGCCAGTTGGTGTGTGAAGAGAATCCCCGGCTCTTGTTTTTATCTGAAT
CAAAGATCAAGAGCTCAAAAGCGGCTATTTATAAGGAAAAGCTGAAGTTTGAAGGGGTGATTGCGGTGGATTGTGTGGGGAAGGGTGGTGGTTTGTGTCTTTTCTGGAAG
GAGGGGTTGGATGTGATCCTGCGGTCCTATAGCAAATTCCATGTTGATGCTATGATTAAATCCAAGGAGGGTTGTTGGAGGTTTACGGGTTTTTATGGTGATCCAGAGGT
GAGAAGGAGGAAGTGTTCATGGGATCTTATGCGAAGGTTGAATGATTTGCCAACGATGCCCTGGGTGTTAGGGGGAGATTTTAATGAACTGGTTAGCTCGGGGGAGAAAG
AATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGAGGGGAGATAGCAGATTGGGGAAGAGGGCGCTGTTAGGCGATGGGGCTGATGGGGTTGGGAATTGGGTTGAAGAACCAGTTGGGAAGAGATTGAAGGAAGC
GTTTGTAGGAGGAGAGAGAGTTGTATCGGCGAACCCTGATGTTCAGGATCGCAATCATTTGTGCCAGTTGGTGTGTGAAGAGAATCCCCGGCTCTTGTTTTTATCTGAAT
CAAAGATCAAGAGCTCAAAAGCGGCTATTTATAAGGAAAAGCTGAAGTTTGAAGGGGTGATTGCGGTGGATTGTGTGGGGAAGGGTGGTGGTTTGTGTCTTTTCTGGAAG
GAGGGGTTGGATGTGATCCTGCGGTCCTATAGCAAATTCCATGTTGATGCTATGATTAAATCCAAGGAGGGTTGTTGGAGGTTTACGGGTTTTTATGGTGATCCAGAGGT
GAGAAGGAGGAAGTGTTCATGGGATCTTATGCGAAGGTTGAATGATTTGCCAACGATGCCCTGGGTGTTAGGGGGAGATTTTAATGAACTGGTTAGCTCGGGGGAGAAAG
AATGA
Protein sequenceShow/hide protein sequence
MGLRGDSRLGKRALLGDGADGVGNWVEEPVGKRLKEAFVGGERVVSANPDVQDRNHLCQLVCEENPRLLFLSESKIKSSKAAIYKEKLKFEGVIAVDCVGKGGGLCLFWK
EGLDVILRSYSKFHVDAMIKSKEGCWRFTGFYGDPEVRRRKCSWDLMRRLNDLPTMPWVLGGDFNELVSSGEKE